Mercurial > repos > jpayne > snp_pipeline
directory /test-data/samples/sample4/ @ 48:fc7a28de6aa0
| name | size | permissions |
|---|---|---|
| [up] | drwxr-xr-x | |
 consensus.fasta
|
177 | -rw-r--r-- |
|
consensus.vcf
|
19476 | -rw-r--r-- |
|
consensus_preserved.fasta
|
148 | -rw-r--r-- |
|
consensus_preserved.vcf
|
17356 | -rw-r--r-- |
|
duplicate_reads_metrics.txt
|
2916 | -rw-r--r-- |
|
metrics
|
362 | -rw-r--r-- |
|
reads.all.pileup
|
4198157 | -rw-r--r-- |
|
reads.sam
|
7253182 | -rw-r--r-- |
|
reads.sorted.bam
|
2524023 | -rw-r--r-- |
|
reads.sorted.deduped.bam
|
2543878 | -rw-r--r-- |
|
reads.unsorted.bam
|
3042932 | -rw-r--r-- |
|
sample4_1.fastq
|
2403406 | -rw-r--r-- |
|
sample4_2.fastq
|
2380214 | -rw-r--r-- |
|
var.flt.vcf
|
8718 | -rw-r--r-- |
|
var.flt_preserved.vcf
|
7120 | -rw-r--r-- |
|
var.flt_removed.vcf
|
3754 | -rw-r--r-- |