jpayne@0: Sample Fastq_Files Fastq_File_Size Machine Flowcell Number_of_Reads Duplicate_Reads Percent_of_Reads_Mapped Average_Insert_Size Average_Pileup_Depth Phase1_SNPs Phase1_Preserved_SNPs Phase2_SNPs Phase2_Preserved_SNPs Missing_SNP_Matrix_Positions Missing_Preserved_SNP_Matrix_Positions Excluded_Sample Excluded_Preserved_Sample Warnings_and_Errors jpayne@0: "sample1" "sample1_1.fastq, sample1_2.fastq" 4818902 20000 110 94.55 286.84 23.22 46 32 46 32 0 0 jpayne@0: "sample2" "sample2_1.fastq, sample2_2.fastq" 4813480 20000 98 94.78 285.90 23.22 44 41 44 41 0 0 jpayne@0: "sample4" "sample4_1.fastq, sample4_2.fastq" 4783620 20000 109 94.44 285.44 22.60 37 28 37 28 0 0 jpayne@0: "sample3" "sample3_1.fastq, sample3_2.fastq" 4774974 20000 118 94.43 284.48 22.55 38 35 38 35 0 0