jpayne@0: sample="sample4" jpayne@0: fastqFileList="sample4_1.fastq, sample4_2.fastq" jpayne@0: fastqFileSize=4783620 jpayne@0: machine= jpayne@0: flowcell= jpayne@0: numberReads=20000 jpayne@0: numberDupReads=109 jpayne@0: percentReadsMapped=94.44 jpayne@0: aveInsertSize=285.44 jpayne@0: avePileupDepth=22.60 jpayne@0: phase1Snps=37 jpayne@0: phase1SnpsPreserved=28 jpayne@0: snps=37 jpayne@0: snpsPreserved=28 jpayne@0: missingPos=0 jpayne@0: missingPosPreserved=0 jpayne@0: excludedSample= jpayne@0: excludedSamplePreserved= jpayne@0: errorList=""