# HG changeset patch
# User jpayne
# Date 1604608224 18000
# Node ID 40405b16de1d5b0d9a40b7bbe9ffc7af0506a9f4
# Parent  0acc1975bbeb08dc884a0c425a4bb1bb7dc8f038
"planemo upload"

diff -r 0acc1975bbeb -r 40405b16de1d 6_merge_vcfs.xml
--- a/6_merge_vcfs.xml	Thu Nov 05 15:21:19 2020 -0500
+++ b/6_merge_vcfs.xml	Thu Nov 05 15:30:24 2020 -0500
@@ -16,8 +16,8 @@
             #end for
         > ./file
         && cat ./file
+        && cfsan_snp_pipeline merge_vcfs ./file
         && cat ./logs*/*log 1>&2
-        && cfsan_snp_pipeline merge_vcfs ./file
     ]]></command>
     <inputs>
         <param type="data_collection" format="vcf" collection_type="list" name="vcfs" label="List of VCFs" />