# HG changeset patch
# User jpayne
# Date 1517419980 18000
# Node ID 97abaa8b8384183380d245dcab136de0fceadfb2
# Parent  8626ed5eb356257c17ee4c65dc2f6c844b9a1cc4
planemo upload commit 7f6183b769772449fbcee903686b8d5ec5b7439f-dirty

diff -r 8626ed5eb356 -r 97abaa8b8384 7_smp_matrix.xml
--- a/7_smp_matrix.xml	Wed Jan 31 12:32:01 2018 -0500
+++ b/7_smp_matrix.xml	Wed Jan 31 12:33:00 2018 -0500
@@ -9,6 +9,10 @@
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
         env &&
+        which bcftools &&
+        which bunzip    &&
+        which snp-pipeline &&
+        which python   &&
         python $__tool_directory__/snp-wind.py ./ -p "consensus.fasta"
             #for $fa in sorted($cons, key=lambda f: f.element_identifier)
                 -n $fa.element_identifier -f $fa