Mercurial > repos > jpayne > snp_pipeline

changeset 54:2939020396a4

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"planemo upload"
author jpayne
date Thu, 05 Nov 2020 15:50:11 -0500
parents 40405b16de1d
children 9b2dab492d50
files 6_merge_vcfs.xml
diffstat 1 files changed, 1 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/6_merge_vcfs.xml	Thu Nov 05 15:30:24 2020 -0500
+++ b/6_merge_vcfs.xml	Thu Nov 05 15:50:11 2020 -0500
@@ -16,8 +16,7 @@
             #end for
         > ./file
         && cat ./file
-        && cfsan_snp_pipeline merge_vcfs ./file
-        && cat ./logs*/*log 1>&2
+        && cfsan_snp_pipeline merge_vcfs ./file -v 5
     ]]></command>
     <inputs>
         <param type="data_collection" format="vcf" collection_type="list" name="vcfs" label="List of VCFs" />