Mercurial > repos > jpayne > snp_pipeline

changeset 5:5191246bc2e2

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planemo upload commit b'7f6183b769772449fbcee903686b8d5ec5b7439f\n'-dirty
author jpayne
date Thu, 25 Jan 2018 13:55:20 -0500
parents 66f988a9666f
children 62191abf5426
files 2_call_sites.xml 3_filter_regions.xml
diffstat 2 files changed, 2 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/2_call_sites.xml	Wed Jan 24 15:51:36 2018 -0500
+++ b/2_call_sites.xml	Thu Jan 25 13:55:20 2018 -0500
@@ -3,6 +3,7 @@
     <requirements>
         <requirement type="package" version="2.3.4">bowtie2</requirement>
         <requirement type="package" version="1.6">samtools</requirement>
+        <requirement type="package" version="1.0.6">bzip2</requirement>
         <requirement type="package">picard</requirement>
         <requirement type="package">varscan</requirement>
         <requirement type="package" version="1.5.11">boto3</requirement>
--- a/3_filter_regions.xml	Wed Jan 24 15:51:36 2018 -0500
+++ b/3_filter_regions.xml	Thu Jan 25 13:55:20 2018 -0500
@@ -2,6 +2,7 @@
     <description>based on SNP location, or lookup cached filtered sitecall</description>
     <requirements>
         <requirement type="package" version="1.6">samtools</requirement>
+        <requirement type="package" version="1.0.6">bzip2</requirement>
         <requirement type="package" version="1.0.1">snp-pipeline</requirement>
         <requirement type="package" version="1.5.11">boto3</requirement>
     </requirements>