Mercurial > repos > jpayne > table_ops
diff table-union.py @ 14:1af2524f48b7 tip
planemo upload
author | jpayne |
---|---|
date | Tue, 30 Oct 2018 16:18:02 -0400 |
parents | 2949b8929037 |
children |
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--- a/table-union.py Fri Mar 09 11:14:02 2018 -0500 +++ b/table-union.py Tue Oct 30 16:18:02 2018 -0400 @@ -4,7 +4,7 @@ -def main(files): +def main(unionize=True, *files): header = [] items = [] possible_identity_headers = None @@ -15,6 +15,8 @@ for field in reader.fieldnames: if field not in set(header): header.append(field) + + #try to find identity columns in the files, to use to join if possible_identity_headers is None: possible_identity_headers = set(reader.fieldnames) @@ -30,7 +32,7 @@ # possible_identity_headers = set((possible_identity_headers.pop(), )) #if we found an identity column, then try to join rows - if possible_identity_headers: + if possible_identity_headers and unionize: key_column = possible_identity_headers.pop() keys = set([r[key_column] for r in items]) merged_rows = [] @@ -47,4 +49,4 @@ if __name__ == '__main__': - main(sys.argv[1:]) \ No newline at end of file + main(*sys.argv[1:]) \ No newline at end of file