Mercurial > repos > jpayne > table_ops
view table-sort.xml @ 6:6ffd502b3cf1
planemo upload
author | jpayne |
---|---|
date | Tue, 30 Jan 2018 12:40:45 -0500 |
parents | b8baf3ffa9d9 |
children | e2d0b5662c08 |
line wrap: on
line source
<tool id="table-sort" name="Sort tabular dataset" version="0.1.0"> <description>on specified header or headers</description> <requirements> <requirement type="package" version="3.4">python</requirement> </requirements> <command detect_errors="exit_code"><![CDATA[ cat $table | $__tool_directory__/table-sort.py $headers > $sorted ]]></command> <inputs> <param name="table" format="tsv" label="Table in TSV format to sort." type="data" /> <param name="headers" type="text" label="Space-delimited list of headers on which to sort." /> </inputs> <outputs> <data name="sorted" format="tsv" label="Sorted table" /> </outputs> <tests> <test> <param name="table" value="combined.tsv" ftype="tsv" /> <param name="headers" value="flavor" /> <output name="sorted" value="sorted.tsv"/> </test> <test> <param name="table" value="sort_test_multiple.txt" ftype="tsv" /> <param name="headers" value="A D" /> <output name="sorted" value="sort_test_multiple_sorted.txt"/> </test> </tests> <help><![CDATA[ Sort a table, ascending, by one or more rows. ]]></help> <citations> </citations> </tool>