Mercurial > repos > jpayne > table_ops
view table-sort.xml @ 13:746091a78780
planemo upload
author | jpayne |
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date | Fri, 09 Mar 2018 11:14:02 -0500 |
parents | 15230438f7f5 |
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<tool id="table-sort" name="Sort tabular dataset" version="0.1.0"> <description>on specified header or headers</description> <requirements> <!-- <requirement type="package" version="3.4">python3</requirement> --> </requirements> <command detect_errors="exit_code"><![CDATA[ cat $table | python $__tool_directory__/table-sort.py $headers > $sorted ]]></command> <inputs> <param name="table" format="tsv" label="Table in TSV format to sort." type="data" /> <param name="headers" type="text" label="Space-delimited list of headers on which to sort." /> </inputs> <outputs> <data name="sorted" format="tsv" label="Sorted table" /> </outputs> <tests> <test> <param name="table" value="combined.tsv" ftype="tsv" /> <param name="headers" value="flavor" /> <output name="sorted" value="sorted.tsv"/> </test> <test> <param name="table" value="sort_test_multiple.txt" ftype="tsv" /> <param name="headers" value="A D" /> <output name="sorted" value="sort_test_multiple_sorted.txt"/> </test> </tests> <help><![CDATA[ Sort a table, ascending, by one or more rows. ]]></help> <citations> </citations> </tool>