Mercurial > repos > jpayne > tableops
comparison table-summary.xml @ 0:402b58f45844 draft default tip
planemo upload commit 9cc4dc1db55299bf92ec6bd359161ece4592bd16-dirty
| author | jpayne |
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| date | Mon, 08 Dec 2025 15:03:06 +0000 |
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| -1:000000000000 | 0:402b58f45844 |
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| 1 <tool id="table-summary" name="Table Summarize: Summarize a tabular dataset" version="0.1.0"> | |
| 2 <description>by counting unique values in columns</description> | |
| 3 <requirements> | |
| 4 <container type="docker">cfsanbiostatistics/tableops:latest</container> | |
| 5 </requirements> | |
| 6 <command detect_errors="exit_code"><![CDATA[ | |
| 7 python $__tool_directory__/table-summarize.py $table > $summary | |
| 8 ]]></command> | |
| 9 <inputs> | |
| 10 <param name="table" type="data" format="tsv,tabular" /> | |
| 11 </inputs> | |
| 12 <outputs> | |
| 13 <data name="summary" format="txt" label="Summary" /> | |
| 14 </outputs> | |
| 15 | |
| 16 <tests> | |
| 17 <test> | |
| 18 <param name="table" value="summary_test.txt" /> | |
| 19 <output name="summary" value="summary.txt" /> | |
| 20 </test> | |
| 21 </tests> | |
| 22 <help><![CDATA[ | |
| 23 Summarize tabular results by counting up unique values in columns. | |
| 24 ]]></help> | |
| 25 | |
| 26 <citations> | |
| 27 </citations> | |
| 28 </tool> |