Mercurial > repos > kkonganti > centrifuge_process
diff test-data/FAL11127.centrifuge.report.txt @ 0:00fa638e833e
"planemo upload"
author | kkonganti |
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date | Wed, 22 Jun 2022 16:13:46 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/FAL11127.centrifuge.report.txt Wed Jun 22 16:13:46 2022 -0400 @@ -0,0 +1,633 @@ +name taxID taxRank genomeSize numReads numUniqueReads abundance +Myxococcus xanthus 34 species 13932464 3 0 0.0 +Campylobacter showae 204 species 4258467 1 1 0.0 +Helicobacter pylori 210 species 1709234 1 0 0.0 +Chryseobacterium indologenes 253 species 50065004 1 0 0.0 +Chryseobacterium indoltheticum 254 species 12892241 2 0 0.0 +Pseudomonas 286 genus 9152014 1 1 0.0 +Pseudomonas aeruginosa 287 species 7072692 18 4 0.0 +Pseudomonas fluorescens 294 species 6544661 1 1 0.0 +Pseudomonas putida 303 species 6202198 176 166 0.0 +Pseudomonas stutzeri 316 species 4548207 1 1 0.0 +Xanthomonas 338 genus 20537120 1 0 0.0 +Legionella pneumophila 446 species 12694692 1 1 0.0 +Acinetobacter baumannii 470 species 4441008 773 461 0.0 +Enterobacteriaceae 543 family 13489643 5 3 0.0 +Citrobacter 544 genus 5276819 11 7 0.0 +Citrobacter koseri 545 species 4735357 15 1 0.0 +Citrobacter freundii 546 species 5164552 188 107 0.0 +Enterobacter 547 genus 13347591 15 5 0.0 +Klebsiella aerogenes 548 species 5435727 53 7 0.0 +Pantoea agglomerans 549 species 64373304 1 0 0.0 +Enterobacter cloacae 550 species 5356576 603 250 0.0 +Pectobacterium carotovorum 554 species 6082915 4 4 0.0 +Escherichia coli 562 species 12349071 12581 7075 0.0 +Shimwellia blattae 563 species 4158725 2 0 0.0 +Escherichia fergusonii 564 species 4643861 516 121 0.0 +Hafnia alvei 569 species 4712721 2 0 0.0 +Klebsiella 570 genus 20682676 3 1 0.0 +Klebsiella oxytoca 571 species 6684898 20 11 0.0 +Klebsiella pneumoniae 573 species 24087989 3746 1703 0.0 +Klebsiella pneumoniae subsp. ozaenae 574 subspecies 11351252 1 1 0.0 +Raoultella planticola 575 species 35433550 5 1 0.0 +Raoultella terrigena 577 species 17219560 3 0 0.0 +Morganella morganii 582 species 25824371 6 2 0.0 +Proteus mirabilis 584 species 3973324 1 1 0.0 +Proteus vulgaris 585 species 37391238 2 0 0.0 +Providencia 586 genus 4402109 2 0 0.0 +Providencia rettgeri 587 species 126907571 1 0 0.0 +Serratia 613 genus 20268144 2 1 0.0 +Serratia marcescens 615 species 35122025 10 6 0.0 +Shigella boydii 621 species 4760589 241 70 0.0 +Shigella dysenteriae 622 species 4560911 876 118 0.0 +Shigella flexneri 623 species 4749132 626 144 0.0 +Shigella sonnei 624 species 14883825 87 37 0.0 +Yersinia enterocolitica 630 species 5997657 6 6 0.0 +Yersinia intermedia 631 species 29376973 21 20 0.0 +Edwardsiella 635 genus 3888600 3 1 0.0 +Edwardsiella tarda 636 species 3777537 5 0 0.0 +Aeromonas caviae 648 species 128558379 1 1 0.0 +Vibrio mimicus 674 species 30808757 1 0 0.0 +Plesiomonas shigelloides 703 species 15080228 2 2 0.0 +Pasteurella multocida 747 species 2875151 1 1 0.0 +Desulfovibrio desulfuricans 876 species 10207353 1 1 0.0 +Staphylococcus aureus 1280 species 3475110 1 1 0.0 +Lysinibacillus sphaericus 1421 species 23839207 3 0 0.0 +Brevibacillus laterosporus 1465 species 5277001 1 1 0.0 +Clostridium botulinum 1491 species 4218882 2 0 0.0 +Gordonia bronchialis 2054 species 5290012 1 0 0.0 +Cronobacter sakazakii 28141 species 4439412 6 1 0.0 +Salmonella enterica 28901 species 14652172 27 9 0.0 +Staphylococcus capitis 29388 species 2503265 2 0 0.0 +Salmonella enterica subsp. enterica serovar California 29474 leaf 4833791 2 0 0.0 +Yersinia ruckeri 29486 species 61173115 5 4 0.0 +Variovorax 34072 genus 6849286 1 0 0.0 +Citrobacter amalonaticus 35703 species 5875351 9 4 0.0 +Stenotrophomonas 40323 genus 4684682 1 0 0.0 +Xenorhabdus bovienii 40576 species 4225498 1 0 0.0 +Ewingella americana 41202 species 5101916 2 1 0.0 +Shigella flexneri 2a 42897 leaf 4891752 12 11 0.0 +Desulfovibrio fairfieldensis 44742 species 3699310 1 1 0.0 +Pseudomonas synxantha 47883 species 52119649 1 0 0.0 +Serratia fonticola 47917 species 40496905 3 1 0.0 +Acinetobacter pittii 48296 species 3862530 10 5 0.0 +Pantoea 53335 genus 4926392 1 1 0.0 +Raoultella ornithinolytica 54291 species 5398151 9 1 0.0 +Salmonella bongori 54736 species 5146373 3 2 0.0 +Citrobacter braakii 57706 species 25393922 6 2 0.0 +Salmonella enterica subsp. enterica serovar Bareilly 58096 leaf 4904673 2 2 0.0 +Salmonella enterica subsp. enterica serovar Waycross 58101 leaf 4812886 1 0 0.0 +Salmonella enterica subsp. enterica serovar Anatum 58712 leaf 77131019 16 8 0.0 +Salmonella enterica subsp. enterica 59201 subspecies 184743493 2 0 0.0 +Salmonella enterica subsp. salamae 59202 subspecies 14802976 1 1 0.0 +Salmonella enterica subsp. arizonae 59203 subspecies 9945825 1 0 0.0 +Pantoea dispersa 59814 species 24245464 4 0 0.0 +Lactiplantibacillus paraplantarum 60520 species 13100599 1 0 0.0 +Enterobacter asburiae 61645 species 4561905 23 14 0.0 +Lelliottia amnigena 61646 species 23167822 5 4 0.0 +Pluralibacter gergoviae 61647 species 16305844 3 0 0.0 +Kluyvera intermedia 61648 species 14616114 5 0 0.0 +Serratia rubidaea 61652 species 34926302 3 0 0.0 +Erwinia tracheiphila 65700 species 19966212 6 0 0.0 +Edwardsiella ictaluri 67780 species 3812301 2 0 0.0 +Citrobacter farmeri 67824 species 10371486 7 2 0.0 +Citrobacter rodentium 67825 species 5444283 3 2 0.0 +Citrobacter sedlakii 67826 species 4967243 3 1 0.0 +Citrobacter werkmanii 67827 species 30277360 11 3 0.0 +Enterobacter cancerogenus 69218 species 24740554 2 2 0.0 +Musicola paradisiaca 69223 species 4679450 1 0 0.0 +Pseudomonas sp. VLB120 69328 species 5966222 2 1 0.0 +Staphylococcus condimenti 70255 species 13388632 1 1 0.0 +Salmonella enterica subsp. enterica serovar Minnesota 70803 leaf 5004825 1 1 0.0 +Klebsiella pneumoniae subsp. pneumoniae 72407 subspecies 462712719 161 66 0.0 +Saccharomonospora xinjiangensis 75294 species 4713652 1 1 0.0 +Pseudomonas monteilii 76759 species 5972603 2 1 0.0 +Pseudomonas rhodesiae 76760 species 17661604 1 1 0.0 +Pseudomonas mosselii 78327 species 17839505 1 1 0.0 +Delftia 80865 genus 6767514 1 0 0.0 +Salmonella enterica subsp. enterica serovar Muenster 82689 leaf 5000356 1 0 0.0 +Buttiauxella 82976 genus 0 1 0 0.0 +Buttiauxella agrestis 82977 species 4566254 1 1 0.0 +Obesumbacterium proteus 82983 species 5011796 2 0 0.0 +Tatumella 82986 genus 0 1 0 0.0 +Tatumella ptyseos 82987 species 3588228 1 0 0.0 +Buttiauxella ferragutiae 82989 species 5286310 1 0 0.0 +Serratia plymuthica 82996 species 5437972 1 0 0.0 +Escherichia coli K-12 83333 strain 93017684 15 9 0.0 +Escherichia coli O157:H7 83334 leaf 691371022 1297 795 0.0 +Leclercia 83654 genus 0 1 0 0.0 +Leclercia adecarboxylata 83655 species 54742355 20 8 0.0 +Succinivibrio dextrinosolvens 83771 species 6318491 1 0 0.0 +Pseudomonas chlororaphis subsp. aurantiaca 86192 subspecies 96327858 1 0 0.0 +Salmonella enterica subsp. enterica serovar Typhi 90370 leaf 443426852 3 0 0.0 +Salmonella enterica subsp. enterica serovar Typhimurium 90371 leaf 644852023 6 4 0.0 +Methylotuvimicrobium buryatense 95641 species 4998879 1 0 0.0 +Proteus penneri 102862 species 7873886 1 0 0.0 +Acinetobacter nosocomialis 106654 species 3824973 6 6 0.0 +Salmonella enterica subsp. enterica serovar Newport 108619 leaf 44472154 1 0 0.0 +Chryseobacterium joostei 112234 species 4890621 1 0 0.0 +Salmonella enterica subsp. enterica serovar Montevideo 115981 leaf 23355574 1 1 0.0 +Pectobacterium 122277 genus 5643257 1 0 0.0 +Providencia alcalifaciens 126385 species 46429804 1 1 0.0 +Citrobacter youngae 133448 species 9812511 43 41 0.0 +Acinetobacter gyllenbergii 134534 species 4091186 2 2 0.0 +Serratia quinivorans 137545 species 10669693 1 1 0.0 +Salmonella enterica subsp. enterica serovar Brandenburg 149387 leaf 14295671 9 6 0.0 +Salmonella enterica subsp. enterica serovar London 149390 leaf 14624766 2 0 0.0 +Salmonella enterica subsp. enterica serovar Enteritidis 149539 leaf 451058042 3 0 0.0 +Escherichia coli O157:H7 str. EDL933 155864 strain 5639399 139 128 0.0 +Pseudomonas parafulva 157782 species 14986882 2 0 0.0 +Cedecea neteri 158822 species 19970488 3 2 0.0 +Enterobacter hormaechei 158836 species 18027410 1233 455 0.0 +Leminorella richardii 158841 species 7952548 2 0 0.0 +Providencia rustigianii 158850 species 7778244 2 0 0.0 +Yokenella regensburgei 158877 species 5219152 2 1 0.0 +Pseudomonas putida KT2440 160488 strain 6181873 1 0 0.0 +Raoultella 160674 genus 5398151 1 0 0.0 +Nocardioides aquaticus 160826 species 4580814 1 1 0.0 +Escherichia coli O127:H6 168807 leaf 9641111 33 0 0.0 +Escherichia coli O111:H- 168927 leaf 5566342 2 0 0.0 +Delftia tsuruhatensis 180282 species 20033614 1 0 0.0 +Morganella morganii subsp. morganii 180434 subspecies 47849203 1 0 0.0 +Pectobacterium brasiliense 180957 species 89335391 1 1 0.0 +Erwinia billingiae 182337 species 5372268 2 2 0.0 +Citrobacter sp. TSA-1 184912 species 5182653 3 3 0.0 +Salmonella enterica subsp. enterica serovar Stanley 192953 leaf 9829611 1 1 0.0 +Salmonella enterica subsp. enterica serovar Kentucky 192955 leaf 72993283 1 0 0.0 +Shigella flexneri 2a str. 301 198214 strain 4828820 2 1 0.0 +Shigella flexneri 2a str. 2457T 198215 strain 4599354 7 1 0.0 +Escherichia coli CFT073 199310 strain 10473804 4 3 0.0 +Dickeya 204037 genus 4822373 3 1 0.0 +Dickeya zeae 204042 species 4682033 2 0 0.0 +Enterobacter kobei 208224 species 62069871 3680 2481 0.0 +Escherichia albertii 208962 species 4701875 240 97 0.0 +Escherichia coli 042 216592 strain 10145183 24 12 0.0 +Pseudomonas alkylphenolica 237609 species 11376632 1 1 0.0 +Escherichia coli O26:H11 244319 leaf 5803315 4 2 0.0 +Escherichia coli O55:H7 244320 leaf 32823896 201 74 0.0 +Klebsiella variicola 244366 species 13020360 160 54 0.0 +Myxococcus xanthus DK 1622 246197 strain 9139763 1 0 0.0 +Klebsiella pneumoniae subsp. pneumoniae MGH 78578 272620 strain 5694894 5 3 0.0 +Kosakonia radicincitans 283686 species 6122453 8 2 0.0 +Salmonella enterica subsp. enterica serovar Stanleyville 286782 leaf 4688242 1 1 0.0 +Salmonella enterica subsp. enterica serovar Indiana 286783 leaf 94348399 2 1 0.0 +Xenorhabdus budapestensis 290110 species 4366413 1 1 0.0 +Citrobacter koseri ATCC BAA-895 290338 strain 4735357 1 0 0.0 +Cronobacter sakazakii ATCC BAA-894 290339 strain 4530777 2 2 0.0 +Enterobacter hormaechei subsp. steigerwaltii 299766 subspecies 35998180 6 4 0.0 +Enterobacter ludwigii 299767 species 72153873 17 10 0.0 +Serratia ureilytica 300181 species 41355228 2 1 0.0 +Shigella dysenteriae Sd197 300267 strain 4560911 60 2 0.0 +Shigella boydii Sb227 300268 strain 4646520 22 8 0.0 +Enterobacter hormaechei subsp. oharae 301102 subspecies 9455913 11 0 0.0 +Enterobacter hormaechei subsp. hormaechei 301105 subspecies 5063734 74 5 0.0 +Pseudomonas entomophila 312306 species 5888780 3 1 0.0 +Escherichia coli ETEC H10407 316401 strain 5325888 7 0 0.0 +Escherichia coli str. K-12 substr. W3110 316407 leaf 4646332 1 0 0.0 +Escherichia coli Nissle 1917 316435 strain 15577622 2 1 0.0 +Escherichia coli O139:H28 str. E24377A 331111 strain 5249288 5 4 0.0 +Escherichia coli HS 331112 strain 4643538 8 2 0.0 +Escherichia coli E110019 340186 strain 5445710 15 12 0.0 +Shigella boydii CDC 3083-94 344609 strain 4874659 18 2 0.0 +Yersinia pestis Angola 349746 strain 9361624 1 0 0.0 +Escherichia coli O111:NM 373045 leaf 5132754 4 0 0.0 +Shigella flexneri 5 str. 8401 373384 strain 4574284 11 6 0.0 +Shigella flexneri 1a 374923 leaf 4853344 17 2 0.0 +Escherichia coli O103:H2 376725 leaf 5470829 2 0 0.0 +Pseudomonas entomophila L48 384676 strain 5888780 1 1 0.0 +Escherichia coli O157:H7 str. Sakai 386585 strain 5594605 9 4 0.0 +Acinetobacter baumannii ATCC 17978 400667 strain 8046357 1 1 0.0 +Xenorhabdus bovienii SS-2004 406818 strain 4225498 2 1 0.0 +Escherichia coli SE11 409438 strain 5155626 3 1 0.0 +Cronobacter 413496 genus 4465108 1 0 0.0 +Cronobacter malonaticus 413503 species 4473761 1 0 0.0 +Yersinia massiliensis 419257 species 10277435 4 0 0.0 +Shigella flexneri 3a 424717 leaf 4825805 40 26 0.0 +Shigella flexneri Y 424720 leaf 4598750 3 1 0.0 +Escherichia coli SE15 431946 strain 4839683 2 2 0.0 +Megamonas funiformis 437897 species 7344008 1 0 0.0 +Escherichia coli SMS-3-5 439855 strain 5215377 5 2 0.0 +Salmonella enterica subsp. enterica serovar 4,[5],12:i:- 440524 leaf 115653122 2 0 0.0 +Escherichia coli O157:H7 str. EC4115 444450 strain 5704171 4 1 0.0 +Escherichia coli BL21(DE3) 469008 strain 18176562 1 1 0.0 +Pseudomonas taiwanensis 470150 species 5851681 1 0 0.0 +Pantoea vagans 470934 species 4888338 1 0 0.0 +Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594 476213 strain 4888494 1 1 0.0 +Escherichia coli ATCC 8739 481805 strain 14413676 19 5 0.0 +Geoalkalibacter subterraneus 483547 species 3717645 1 1 0.0 +Pseudomonas anuradhapurensis 485870 species 5393636 2 1 0.0 +Kosakonia oryzae 497725 species 10952806 2 0 0.0 +Edwardsiella tarda EIB202 498217 strain 3804166 5 0 0.0 +Escherichia coli C 498388 strain 4617024 6 0 0.0 +Escherichia coli str. K-12 substr. MG1655 511145 leaf 41777256 12 11 0.0 +Gordonia bronchialis DSM 43247 526226 strain 5290012 1 0 0.0 +Proteus mirabilis HI4320 529507 strain 4099895 1 1 0.0 +Escherichia coli DH1 536056 strain 9252137 1 0 0.0 +Enterobacter mori 539813 species 24546261 2 0 0.0 +Haloterrigena turkmenica DSM 5511 543526 strain 5440782 1 1 0.0 +Escherichia coli O157:H7 str. TW14359 544404 strain 5622737 7 1 0.0 +Hafnia paralvei 546367 species 14296183 2 0 0.0 +Escherichia coli W 566546 strain 10014211 1 1 0.0 +Escherichia coli NU14 569579 strain 5076615 1 0 0.0 +Escherichia coli O26:H11 str. 11368 573235 strain 5855531 2 0 0.0 +Escherichia coli O127:H6 str. E2348/69 574521 strain 5069678 8 0 0.0 +Acinetobacter baumannii ATCC 19606 = CIP 70.34 = JCM 6841 575584 strain 3944918 3 0 0.0 +Escherichia coli O91:H21 577675 strain 5093580 4 0 0.0 +Escherichia coli IAI1 585034 strain 4700560 4 0 0.0 +Escherichia coli S88 585035 strain 5166121 2 0 0.0 +Escherichia fergusonii ATCC 35469 585054 strain 4643861 4 0 0.0 +Escherichia coli 55989 585055 strain 5154862 3 2 0.0 +Escherichia coli IAI39 585057 strain 5132068 19 5 0.0 +Escherichia coli O103:H2 str. 12009 585395 leaf 5524860 5 0 0.0 +Escherichia coli O111:H- str. 11128 585396 strain 5766081 2 2 0.0 +Pseudomonas chlororaphis 587753 species 64165794 2 1 0.0 +Shigella flexneri 2002017 591020 strain 4894492 4 1 0.0 +Escherichia coli LF82 591946 strain 9545992 8 0 0.0 +Escherichia coli KO11FL 595495 strain 5027172 7 0 0.0 +Blattabacterium sp. (Periplaneta americana) str. BPLAN 600809 strain 640442 1 0 0.0 +Neisseria shayeganii 607712 species 2419744 1 0 0.0 +Shimwellia blattae DSM 4481 = NBRC 105725 630626 strain 4158725 1 0 0.0 +Citrobacter rodentium ICC168 637910 strain 5444283 1 1 0.0 +Klebsiella variicola At-22 640131 strain 5458505 1 1 0.0 +Pseudomonas sp. CMR5c 658630 species 6796817 1 1 0.0 +Mixta calida 665913 species 4308453 2 1 0.0 +Escherichia coli O83:H1 str. NRG 857C 685038 strain 4894879 2 0 0.0 +Escherichia coli UMNK88 696406 strain 5666764 13 7 0.0 +Acinetobacter baumannii 1656-2 696749 strain 4023106 1 0 0.0 +Escherichia coli O55:H7 str. CB9615 701177 strain 5452353 33 0 0.0 +[Enterobacter] lignolyticus SCF1 701347 strain 4814049 3 2 0.0 +Escherichia coli IHE3034 714962 strain 5108383 3 1 0.0 +Enterobacter cloacae subsp. cloacae ATCC 13047 716541 strain 5598796 1 0 0.0 +Escherichia coli Xuzhou21 741093 strain 5516736 6 2 0.0 +Escherichia coli 1303 745156 strain 5156928 4 2 0.0 +Acinetobacter indicus 756892 species 66982650 1 1 0.0 +Escherichia coli ECC-1470 758831 strain 4903812 1 1 0.0 +Haliscomenobacter hydrossis DSM 1100 760192 strain 8771651 1 1 0.0 +Salmonella enterica subsp. enterica serovar Newport str. CVM 22513 796732 strain 4951115 1 0 0.0 +Salmonella enterica subsp. enterica serovar Newport str. CVM N1543 858307 strain 4946544 1 0 0.0 +Escherichia coli UM146 869729 strain 5107563 21 19 0.0 +Acinetobacter pittii PHEA-2 871585 strain 3862530 1 1 0.0 +Enterobacter bugandensis 881260 species 43861925 5 5 0.0 +Escherichia coli str. 'clone D i14' 885275 strain 5038386 1 0 0.0 +Escherichia coli str. 'clone D i2' 885276 strain 5038386 1 0 0.0 +Acinetobacter baumannii MDR-TJ 889738 strain 4153407 1 0 0.0 +Salmonella enterica subsp. enterica serovar Gaminara 913070 leaf 5030148 1 1 0.0 +Salmonella enterica subsp. enterica serovar Inverness 913074 leaf 5098780 1 0 0.0 +Escherichia coli TW11681 913088 strain 5283837 12 0 0.0 +Sandaracinus amylolyticus 927083 species 21291132 1 1 0.0 +Pseudomonas brassicacearum 930166 species 6843248 1 0 0.0 +Escherichia coli O157:H16 930406 strain 10317655 43 26 0.0 +Klebsiella aerogenes EA1509E 935296 strain 5591105 1 0 0.0 +Salmonella enterica subsp. enterica serovar Inverness str. ATCC 10720 941187 strain 4989883 1 0 0.0 +Salmonella enterica subsp. enterica serovar Pomona str. ATCC 10729 941188 strain 4678025 1 0 0.0 +Escherichia coli VR50 941323 strain 5196066 2 1 0.0 +Acinetobacter baumannii D1279779 945556 strain 3711700 9 8 0.0 +Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 984237 strain 4905181 1 1 0.0 +Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 990282 strain 4911145 1 1 0.0 +Polymorphum gilvum SL003B-26A1 991905 strain 4718963 1 0 0.0 +Escherichia coli O121:H19 991915 leaf 10959022 60 25 0.0 +Escherichia coli O145:NM 991919 leaf 5790057 69 41 0.0 +Escherichia coli O157:H7 str. EC10 996639 strain 5021697 3 0 0.0 +Escherichia coli PCN033 1001989 strain 5156873 25 2 0.0 +Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 1016998 strain 4858887 1 0 0.0 +Klebsiella aerogenes KCTC 2190 1028307 strain 5280350 1 0 0.0 +Flavobacterium branchiophilum FL-15 1034807 strain 3563292 1 0 0.0 +Escherichia coli O104:H4 1038927 leaf 16386596 4 0 0.0 +Pseudomonas putida S16 1042876 strain 5984790 1 1 0.0 +Escherichia coli O157 1045010 leaf 45603340 453 376 0.0 +Escherichia coli O104:H4 str. C227-11 1048254 strain 5446006 2 2 0.0 +Escherichia coli O55:H7 str. RM12579 1048689 strain 5448306 38 8 0.0 +Klebsiella pneumoniae KCTC 2242 1049565 strain 5462423 6 0 0.0 +Escherichia coli O26 str. RM8426 1055533 strain 5738300 6 2 0.0 +Escherichia coli O26 str. RM10386 1055534 strain 5967793 3 1 0.0 +Escherichia coli O145 1055538 leaf 60672481 159 104 0.0 +Escherichia coli O103 str. RM8385 1055540 strain 5732806 11 8 0.0 +Escherichia coli O43 str. RM10042 1055541 leaf 5261709 8 5 0.0 +Escherichia coli O111 str. RM9322 1055542 strain 5284381 3 2 0.0 +Escherichia coli O121 str. RM8352 1055543 leaf 5474275 30 13 0.0 +Escherichia coli O91 str. RM7190 1055545 strain 5030336 5 2 0.0 +Salmonella enterica subsp. enterica serovar Thompson str. RM6836 1064551 strain 4707648 1 1 0.0 +Escherichia coli O7:K1 str. CE10 1072459 strain 5378729 18 3 0.0 +Vibrio alfacsensis 1074311 species 15405513 1 1 0.0 +Pantoea rwandensis 1076550 species 4327607 1 0 0.0 +Escherichia coli O113:H21 1078021 leaf 5131000 3 3 0.0 +Escherichia coli O45:H2 1078032 leaf 5680623 19 14 0.0 +Shigella flexneri 5a str. M90T 1086030 strain 4828909 20 7 0.0 +Dickeya solani 1089444 species 4920704 1 0 0.0 +Methylotuvimicrobium alcaliphilum 20Z 1091494 strain 4796711 1 0 0.0 +Acinetobacter baumannii BJAB0715 1096996 strain 4053889 5 0 0.0 +Enterobacter cloacae subsp. dissolvens SDM 1104326 strain 4968248 1 1 0.0 +Brenneria nigrifluens DSM 30175 = ATCC 13028 1121120 strain 4891702 1 1 0.0 +Brevibacillus laterosporus DSM 25 1121121 strain 5400144 1 1 0.0 +Klebsiella pneumoniae subsp. pneumoniae Kp13 1123862 strain 5739888 7 0 0.0 +Klebsiella pneumoniae subsp. pneumoniae HS11286 1125630 strain 5682322 1 1 0.0 +Klebsiella michiganensis 1134687 species 6150064 12 4 0.0 +Cronobacter sakazakii ES15 1138308 strain 4268675 1 1 0.0 +Kosakonia sacchari 1158459 species 4902027 3 0 0.0 +Cronobacter malonaticus LMG 23826 1159491 strain 4473761 1 0 0.0 +Cronobacter muytjensii ATCC 51329 1159613 strain 4364114 3 0 0.0 +Pseudomonas sp. R3-18-08 1173283 species 5810083 1 1 0.0 +Pectobacterium wasabiae CFBP 3304 1175631 strain 5043228 1 0 0.0 +Kosakonia radicincitans DSM 16656 1177180 strain 6122453 2 0 0.0 +Klebsiella pneumoniae subsp. pneumoniae 1084 1193292 strain 5386705 17 16 0.0 +Myxococcus xanthus DZ2 1198133 strain 18725165 1 0 0.0 +Pseudomonas sp. UW4 1207075 species 6183388 1 1 0.0 +Pseudomonas putida HB3267 1215088 strain 5956110 6 6 0.0 +Actinomadura sp. WMMB 499 1219491 species 9187113 1 1 0.0 +Caldicellulosiruptor changbaiensis 1222016 species 2905633 1 0 0.0 +Dickeya solani D s0432-1 1231725 strain 4919812 1 0 0.0 +Kosakonia sacchari SP1 1235834 strain 4902027 3 0 0.0 +Salmonella enterica subsp. enterica serovar Johannesburg str. ST203 1242101 strain 4651794 1 1 0.0 +Salmonella enterica subsp. arizonae serovar 63:g,z51:- 1243607 leaf 4598348 1 0 0.0 +Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110356 1243621 strain 4682805 1 1 0.0 +Klebsiella pneumoniae CG43 1244085 strain 5166857 6 1 0.0 +Escherichia coli O145:H28 str. RM12581 1248823 strain 5737293 21 2 0.0 +Escherichia coli O145:H28 str. RM13514 1248902 strain 5737294 19 0 0.0 +Escherichia coli O145:H28 str. RM12761 1248903 strain 5559014 11 1 0.0 +Escherichia coli O145:H28 str. RM13516 1248915 strain 5559008 10 0 0.0 +Pseudomonas sp. FGI182 1259844 species 5891312 4 4 0.0 +Raoultella electrica 1259973 species 5785203 1 0 0.0 +Citrobacter amalonaticus Y19 1261127 strain 5875351 1 0 0.0 +Edwardsiella piscicida 1263550 species 3857040 12 0 0.0 +Croceibacterium atlanticum 1267766 species 3475106 1 0 0.0 +Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050 1271863 strain 5267011 6 6 0.0 +Escherichia coli APEC O78 1274814 strain 4798435 2 2 0.0 +Shigella flexneri 2003036 1282357 strain 4595814 1 0 0.0 +Klebsiella pneumoniae DMC1097 1284798 strain 5710688 11 3 0.0 +Klebsiella pneumoniae UHKPC07 1284804 strain 5523776 1 1 0.0 +Enterobacter hormaechei subsp. xiangfangensis 1296536 subspecies 45504253 108 62 0.0 +Salmonella enterica subsp. houtenae str. CFSAN000552 1299291 strain 4576555 2 0 0.0 +Kosakonia cowanii JCM 10956 = DSM 18146 1300165 strain 4857324 1 1 0.0 +Pseudomonas soli 1306993 species 6247860 1 1 0.0 +Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 1308539 strain 5362708 20 1 0.0 +Escherichia coli ACN001 1311757 strain 4936576 1 1 0.0 +Klebsiella pneumoniae subsp. pneumoniae KPNIH27 1328324 strain 6132443 5 2 0.0 +Klebsiella pneumoniae subsp. pneumoniae KPR0928 1328325 strain 5436785 1 0 0.0 +Klebsiella pneumoniae MGH 39 1328373 strain 5730426 4 2 0.0 +Escherichia coli O157:H7 str. SS17 1328859 strain 5655941 62 53 0.0 +Enterobacter sp. MGH 3 1329812 species 5226758 24 0 0.0 +Enterobacter sp. MGH 7 1329816 species 5305481 31 0 0.0 +Enterobacter sp. MGH 14 1329823 species 5481241 24 0 0.0 +Enterobacter sp. BWH 37 1329836 species 5255410 20 0 0.0 +Escherichia coli APEC IMT5155 1329907 strain 5126057 12 8 0.0 +Escherichia coli O157:H7 str. SS52 1330457 strain 5583430 12 6 0.0 +Kosakonia 1330547 genus 5293934 1 0 0.0 +Citrobacter freundii CFNIH1 1333848 strain 5371331 3 0 0.0 +Enterobacter cloacae ECNIH2 1333850 strain 5502685 1 0 0.0 +[Enterobacter] lignolyticus 1334193 species 4814049 5 2 0.0 +Escherichia coli O104:H21 str. CFSAN002236 1335303 strain 5045919 1 0 0.0 +Paenibacillus lentus 1338368 species 5288676 1 1 0.0 +Pseudomonas sp. JY-Q 1338689 species 6178825 1 0 0.0 +Escherichia coli O157:H7 str. F8092B 1343836 strain 5618714 6 4 0.0 +Yersinia pestis 2944 1345702 strain 4672740 1 0 0.0 +Aeromonas hydrophila 4AK4 1354302 strain 4527993 1 1 0.0 +Escherichia coli JJ1887 1355101 strain 5331521 1 1 0.0 +Bradyrhizobium diazoefficiens 1355477 species 18211892 2 0 0.0 +Escherichia coli PCN061 1358422 strain 4901825 4 1 0.0 +Klebsiella pneumoniae KP-1 1365186 strain 5375667 2 1 0.0 +Acinetobacter baumannii DU202 1370126 strain 4178958 1 0 0.0 +Pseudomonas putida S13.1.2 1384061 strain 6621848 1 1 0.0 +Synechococcus sp. MVIR-18-1 1386941 species 2451974 1 1 0.0 +Klebsiella pneumoniae subsp. pneumoniae 1158 1392499 strain 5341039 1 0 0.0 +Klebsiella pneumoniae HK787 1392500 strain 5329385 1 0 0.0 +Escherichia coli M8 1392854 strain 5279597 3 3 0.0 +Acinetobacter baumannii ZW85-1 1400867 strain 3925246 4 3 0.0 +Dickeya aquatica 1401087 species 4501560 1 1 0.0 +Klebsiella pneumoniae 30660/NJST258_1 1420012 strain 5540936 1 1 0.0 +Pseudomonas protegens Cab57 1420599 leaf 6827892 1 1 0.0 +Enterobacter asburiae L1 1421338 strain 4561905 1 0 0.0 +Escherichia albertii KF1 1440052 strain 4701875 14 4 0.0 +Escherichia coli O157:H16 str. 98-3133 1446608 leaf 4882073 4 4 0.0 +Escherichia coli O169:H41 1446701 strain 10379449 67 2 0.0 +Escherichia coli O25:NM 1446707 leaf 5042926 5 0 0.0 +Escherichia coli O39:NM str. F8704-2 1446739 strain 5603010 19 16 0.0 +Escherichia coli O6:H16 1446746 leaf 15266711 10 5 0.0 +Acinetobacter baumannii LAC-4 1455315 strain 3968436 2 0 0.0 +Mixta theicola 1458355 species 4647413 2 2 0.0 +Klebsiella quasipneumoniae subsp. similipneumoniae 1463164 subspecies 38988063 9 5 0.0 +Klebsiella quasipneumoniae 1463165 species 33654483 113 50 0.0 +Hymenobacter sp. PAMC 26628 1484118 species 5366977 1 1 0.0 +Escherichia marmotae 1499973 species 44089703 144 50 0.0 +Escherichia coli O2:H6 1502658 leaf 5109630 1 0 0.0 +Rahnella victoriana 1510570 species 5472828 2 1 0.0 +Acinetobacter seifertii 1530123 species 106138305 1 1 0.0 +Citrobacter pasteurii 1563222 species 9676193 2 1 0.0 +Citrobacter sp. R56 1573676 species 4710468 1 1 0.0 +Pseudomonas sp. R76 1573711 species 6829095 1 0 0.0 +Proteus terrae 1574161 species 49421585 1 0 0.0 +Mixta intestinalis 1615494 species 4784919 2 2 0.0 +Erwinia gerundensis 1619313 species 13353106 1 1 0.0 +Pseudomonas sp. PONIH3 1636610 species 6313552 1 1 0.0 +Citrobacter portucalensis 1639133 species 97901734 150 130 0.0 +Kosakonia pseudosacchari 1646340 species 5003047 2 0 0.0 +Pseudomonas sp. CCOS 191 1649877 species 6012947 5 5 0.0 +Blattabacterium cuenoti 1653831 species 632160 1 0 0.0 +Streptomyces sp. Tue 6075 1661694 species 7931832 1 0 0.0 +Klebsiella quasipneumoniae subsp. quasipneumoniae 1667327 subspecies 28320903 4 0 0.0 +Caulobacter flavus 1679497 species 5659202 1 1 0.0 +Chryseobacterium glaciei 1685010 species 4871648 1 0 0.0 +Citrobacter sp. MGH103 1686378 species 5406561 1 0 0.0 +Citrobacter sp. MGH105 1686380 species 5543425 6 0 0.0 +Citrobacter sp. CRE-46 1703250 species 6081860 1 0 0.0 +Pedobacter sp. PACM 27299 1727164 species 6147290 1 1 0.0 +Pseudomonas sp. Leaf58 1736226 species 6335721 1 1 0.0 +Citrobacter cronae 1748967 species 5297769 3 1 0.0 +Dickeya fangzhongdai 1778540 species 40427095 1 1 0.0 +Enterobacter hormaechei subsp. hoffmannii 1812934 subspecies 20148518 31 31 0.0 +Enterobacter roggenkampii 1812935 species 115489390 39 20 0.0 +Pseudomonas sp. MYb193 1827300 species 6211636 1 1 0.0 +Enterobacter sp. ODB01 1827481 species 4534036 298 246 0.0 +Yersinia sp. FDAARGOS_228 1839800 species 4963041 1 0 0.0 +Scandinavium goeteborgense 1851514 species 4713964 2 1 0.0 +Pantoea alhagi 1891675 species 4316301 1 1 0.0 +Oceanisphaera avium 1903694 species 2902896 1 1 0.0 +Klebsiella sp. LTGPAF-6F 1905288 species 6790399 2 0 0.0 +Cronobacter sp. JZ38 1906275 species 4555937 3 1 0.0 +Enterobacter sp. SA187 1914861 species 4429597 1 0 0.0 +Enterobacter cloacae complex sp. ECNIH7 1915310 species 5388828 1 0 0.0 +Ketobacter alkanivorans 1917421 species 4914503 1 1 0.0 +Citrobacter sp. CFNIH10 1920110 species 5738233 1 1 0.0 +Leclercia sp. LSNIH1 1920114 species 5411940 8 7 0.0 +Leclercia sp. LSNIH3 1920116 species 5389886 3 2 0.0 +Klebsiella sp. M5al 1934254 species 5800138 1 0 0.0 +Pseudomonas shirazica 1940636 species 6024098 1 1 0.0 +Escherichia coli APEC O2-211 1954351 strain 5318341 2 1 0.0 +Phytobacter ursingii 1972431 species 6166452 4 1 0.0 +Enterobacter sp. Crenshaw 1977566 species 4630785 2 0 0.0 +Klebsiella sp. LY 2015795 species 5608553 3 0 0.0 +Klebsiella quasivariicola 2026240 species 5946706 13 7 0.0 +Escherichia coli O8:H8 2027293 leaf 4909393 9 8 0.0 +Escherichia coli O8:H28 2027295 strain 4917512 5 4 0.0 +Enterobacter cloacae complex sp. 2027919 species 65972975 451 102 0.0 +Escherichia sp. E4742 2044467 species 5120753 64 49 0.0 +Escherichia coli O114:H49 2048775 leaf 5145656 4 1 0.0 +Escherichia coli O178:H19 2048778 strain 5307783 2 1 0.0 +Escherichia coli O25:H16 2048780 leaf 5078362 13 4 0.0 +Escherichia coli O27:H7 2048781 strain 4952219 5 4 0.0 +Enterobacter sp. CRENT-193 2051905 species 5196641 17 1 0.0 +Klebsiella grimontii 2058152 species 93613510 6 1 0.0 +Pseudomonas sp. XWY-1 2069256 species 6297253 1 1 0.0 +Enterobacter sichuanensis 2071710 species 4711389 2 1 0.0 +Escherichia coli O78 2072463 leaf 5360188 57 11 0.0 +Enterobacter cloacae complex sp. FDA-CDC-AR_0132 2077137 species 4971441 2 1 0.0 +Citrobacter freundii complex sp. CFNIH3 2077147 species 5634842 3 0 0.0 +Citrobacter freundii complex sp. CFNIH9 2077149 species 5688355 34 32 0.0 +Escherichia coli O2:H1 2079157 strain 5139616 1 1 0.0 +Pseudomonas sp. SWI36 2083052 species 6172256 1 0 0.0 +Mixta 2100764 genus 0 1 0 0.0 +Melaminivora sp. SC2-9 2109913 species 3754020 1 0 0.0 +Klebsiella huaxiensis 2153354 species 6300829 2 0 0.0 +Lelliottia sp. WB101 2153385 species 4734070 1 0 0.0 +Colwellia sp. Arc7-D 2161872 species 4305442 1 0 0.0 +Pectobacterium aquaticum 2204145 species 4464425 1 0 0.0 +Raoultella sp. X13 2259647 species 5448479 3 0 0.0 +Klebsiella sp. P1CD1 2267618 species 5633647 11 0 0.0 +Leclercia sp. W17 2282309 species 5125645 1 0 0.0 +Leclercia sp. W6 2282310 species 4945486 2 0 0.0 +Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) 2339227 leaf 9750355 2 2 0.0 +Acinetobacter sp. FDAARGOS_493 2420300 species 4021456 6 5 0.0 +Serratia sp. 3ACOL1 2448483 species 5876609 1 1 0.0 +Enterobacter oligotrophicus 2478464 species 4476585 1 1 0.0 +Buttiauxella sp. 3AFRM03 2479367 species 5498356 1 1 0.0 +Pseudomonas sp. LTGT-11-2Z 2479393 species 6073276 1 1 0.0 +Parasedimentitalea marina 2483033 species 5080916 1 0 0.0 +Pectobacterium versatile 2488639 species 34910019 3 2 0.0 +Klebsiella africana 2489010 species 10866049 34 5 0.0 +Klebsiella variicola subsp. tropica 2489014 subspecies 5544082 4 4 0.0 +Escherichia coli O22:H8 2491679 strain 5251120 12 10 0.0 +Escherichia coli O39:H21 2491692 strain 5017694 1 1 0.0 +Escherichia coli O4:H5 2491878 strain 4858260 8 1 0.0 +Enterobacter sp. N18-03635 2500132 species 4687155 2 2 0.0 +Citrobacter arsenatis 2546350 species 5370228 1 1 0.0 +Citrobacter tructae 2562449 species 4946572 2 1 0.0 +Salmonella enterica subsp. enterica serovar Dessau 2564349 leaf 4846296 1 1 0.0 +Citrobacter sp. CF971 2566012 species 5512617 1 0 0.0 +Vibrio taketomensis 2572923 species 8665221 2 1 0.0 +Citrobacter sp. TBCP-5362 2576406 species 4569707 2 0 0.0 +Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- 2583588 leaf 145867710 4 2 0.0 +Klebsiella pasteurii 2587529 species 6309955 1 0 0.0 +Klebsiella variicola subsp. variicola 2590157 subspecies 28058494 25 12 0.0 +Escherichia coli O1:H42 2592065 leaf 5278774 5 2 0.0 +Frigoribacterium sp. NBH87 2596916 species 3407805 1 1 0.0 +Providencia sp. 1701011 2603244 species 4596310 1 0 0.0 +Providencia sp. 1701091 2603245 species 4623927 1 0 0.0 +Escherichia coli O10:H32 2603836 leaf 5564014 2 0 0.0 +Escherichia coli O16:H48 2605619 leaf 75377590 2 2 0.0 +Escherichia coli O80:H26 2605620 leaf 5338095 6 2 0.0 +Pseudomonas sp. CFA 2651048 species 6136274 1 0 0.0 +Pseudomonas sp. 14181154 2662033 species 5612807 1 0 0.0 +Vibrio algicola 2662262 species 3512181 1 1 0.0 +Citrobacter sp. H12-3-2 2664853 species 5143213 32 0 0.0 +Citrobacter sp. S40-1-2 2664854 species 5143213 32 0 0.0 +Pseudomonas juntendi 2666183 species 11629428 1 0 0.0 +Erwinia sp. E602 2675378 species 5168686 3 2 0.0 +Klebsiella sp. WP4-W18-ESBL-05 2675713 species 5247263 2 0 0.0 +Klebsiella sp. WP7-S18-CRE-02 2675716 species 5343134 7 0 0.0 +Klebsiella sp. WP7-S18-CRE-03 2675717 species 5350126 7 7 0.0 +Klebsiella sp. WP7-S18-ESBL-04 2675718 species 5377246 7 0 0.0 +Leclercia sp. J807 2681307 species 4719331 2 0 0.0 +Leclercia sp. 119287 2681308 species 4873875 1 0 0.0 +Leclercia sp. Colony189 2681309 species 4850895 6 5 0.0 +Streptomyces broussonetiae 2686304 species 9735779 1 1 0.0 +Klebsiella sp. PCX 2686364 species 5176451 5 1 0.0 +Proteus sp. ZN5 2697019 species 4408239 1 0 0.0 +Citrobacter sp. LUTT5 2697370 species 5034577 2 0 0.0 +Escherichia coli O84:H7 2697517 leaf 4926859 10 2 0.0 +Leclercia sp. 29361 2714951 species 4943774 1 0 0.0 +Citrobacter sp. Y3 2716879 species 5370159 1 0 0.0 +Enterobacter sp. DNB-S2 2720029 species 4728166 1 0 0.0 +Arcanobacterium sp. 2701 2722751 species 1941174 1 1 0.0 +Escherichia sp. SCLE84 2725997 species 5384463 18 2 0.0 +Pseudomonas sp. SK 2729423 species 5679110 1 0 0.0 +Pectobacterium sp. PL64 2738983 species 5076332 1 1 0.0 +Citrobacter sp. RHB20-C15 2742620 species 4992648 1 0 0.0 +Citrobacter sp. RHB20-C16 2742621 species 4991577 1 0 0.0 +Citrobacter sp. RHB21-C01 2742622 species 4652001 2 0 0.0 +Citrobacter sp. RHB21-C05 2742623 species 4652007 2 0 0.0 +Citrobacter sp. RHB25-C09 2742624 species 4382172 4 3 0.0 +Citrobacter sp. RHB35-C21 2742626 species 5404783 2 0 0.0 +Citrobacter sp. RHB36-C18 2742627 species 4843970 1 1 0.0 +Citrobacter sp. RHBSTW-00017 2742629 species 5059614 1 0 0.0 +Enterobacter sp. RHBSTW-00422 2742646 species 5234715 1 0 0.0 +Citrobacter sp. RHBSTW-00424 2742647 species 5494257 1 0 0.0 +Klebsiella sp. RHBSTW-00464 2742649 species 6938795 3 0 0.0 +Citrobacter sp. RHBSTW-00524 2742653 species 5414996 1 0 0.0 +Citrobacter sp. RHBSTW-00570 2742655 species 5439368 1 1 0.0 +Enterobacter sp. RHBSTW-00593 2742656 species 5018130 1 0 0.0 +Citrobacter sp. RHBSTW-00903 2742670 species 5605421 1 0 0.0 +Citrobacter sp. RHBSTW-00986 2742675 species 5363930 1 1 0.0 +Enterobacter sp. RHBSTW-00994 2742676 species 4888717 1 0 0.0 +Acidovorax antarcticus 2743470 species 5025439 1 0 0.0 +Pseudomonas sp. OE 28.3 2745519 species 6573451 3 3 0.0 +Pseudomonas sp. RtIB026 2749999 species 5928067 1 1 0.0 +Escherichia coli O150:H6 2763104 leaf 5211045 11 11 0.0 +Escherichia coli O15:H12 2773704 leaf 5274628 1 0 0.0 +Escherichia coli O18ac:H14 2773705 leaf 5293395 12 4 0.0 +Escherichia coli O68:H12 2773706 leaf 5135698 9 4 0.0 +Escherichia coli O19:H7 2773707 leaf 5217997 10 5 0.0 +Xanthomonas hydrangeae 2775159 species 16121511 1 0 0.0 +Pseudomonas sp. OST1909 2777367 species 6306352 1 0 0.0 +Amycolatopsis sp. FDAARGOS 1241 2778070 species 9798102 5 5 0.0 +Escherichia coli O100:H21 2778652 leaf 4955522 1 1 0.0 +Escherichia coli O112ab:H8 2778653 leaf 5353630 6 0 0.0 +Escherichia coli O152:H23 2778654 leaf 5025679 2 0 0.0 +Escherichia coli O167:H26 2778655 leaf 4970871 28 13 0.0 +Escherichia coli O20:H12 2778656 leaf 5190756 4 3 0.0 +Escherichia coli O9:H10 2778657 leaf 9473781 12 0 0.0 +Citrobacter sp. BDA59-3 2781952 species 5349552 2 1 0.0 +Klebsiella sp. BDA134-6 2787706 species 6061544 1 0 0.0 +Enterobacter cloacae complex sp. AR_0002 2798729 species 5021981 18 0 0.0 +Raoultella sp. XY-1 2799495 species 5972438 3 0 0.0 +Escherichia coli O7:H4 2810404 leaf 5032262 5 4 0.0 +Escherichia coli O89m:H10 2810405 leaf 5274803 1 1 0.0 +Escherichia coli O89m:H9 2810406 leaf 4988215 2 1 0.0 +Escherichia coli O126:H45 2810407 leaf 5402822 2 2 0.0 +Escherichia coli H20 2810409 leaf 5186956 2 1 0.0 +Pseudomonas sp. PDNC002 2811422 species 6393486 1 1 0.0 +Leclercia sp. 4-9-1-25 2815358 species 8787573 2 2 0.0 +Escherichia coli O128ac:H12 2822132 leaf 5130057 7 0 0.0 +Klebsiella sp. P1954 2829835 species 5650766 29 0 0.0 +Enterobacter sp. JBIWA008 2831892 species 5080097 1 1 0.0 +Serratia sp. JSRIV002 2831894 species 6384123 1 0 0.0 +Serratia sp. JSRIV004 2831895 species 6188426 1 0 0.0 +Serratia sp. JSRIV006 2831896 species 5896793 1 0 0.0 +Klebsiella sp. A52 2834819 species 5079954 3 0 0.0 +Enterobacter sp. SGAir0187 2836161 species 4826853 1 0 0.0 +Asticcacaulis sp. AND118 2840468 species 4053310 1 0 0.0 +Pseudomonas sp. SK2 2841063 species 5455489 1 0 0.0 +Pseudomonas fakonensis 2842355 species 6147080 2 1 0.0 +Pseudomonas xanthosomae 2842356 species 5987104 1 0 0.0 +Pseudomonas muyukensis 2842357 species 5527654 2 2 0.0 +Escherichia coli O158:H23 2848144 leaf 5191720 31 21 0.0 +Escherichia coli O170:H18 2848145 leaf 5041163 7 3 0.0 +Enterobacter cloacae complex sp. ECL72 2850078 species 4851460 2 1 0.0 +Enterobacter cloacae complex sp. ECL78 2850492 species 4770506 19 5 0.0 +Enterobacter cloacae complex sp. ECL112 2850493 species 4727601 27 5 0.0 +Klebsiella sp. PL-2018 2851540 species 6225264 2 0 0.0 +Escherichia sp. TC-EC600-tetX4 2857061 species 4600187 4 0 0.0 +Escherichia sp. TM-G17TGC 2860337 species 4676327 5 0 0.0 +Escherichia coli O139:H1 2861805 leaf 10337129 39 4 0.0 +Escherichia coli O141:H4 2861806 leaf 5676370 5 3 0.0 +Pseudomonas sp. S07E 245 2866278 species 5379044 1 1 0.0 +Pseudomonas sp. Marseille-Q3773 2866592 species 5557112 1 1 0.0 +Pseudomonas sp. 2hn 2866626 species 5901931 1 1 0.0 +Candidatus Symbiopectobacterium sp. SyEd1 2871826 species 4942431 1 1 0.0 +Kluyvera sp. CRP 2873269 species 5157963 1 1 0.0 +Escherichia coli O99:H6 2874051 leaf 4903963 6 1 0.0 +Escherichia coli O16:H6 2874052 leaf 5015239 4 1 0.0 +Pseudomonas sp. p1(2021b) 2874628 species 5565255 923 922 0.0 +Candidatus Methanoliparum sp. LAM-1 2874846 species 1254503 1 0 0.0 +Vogesella sp. XCS3 2877939 species 3889382 1 1 0.0 +Salmonella sp. JXY0409-18 2879113 species 4877564 1 0 0.0 +Pseudomonas sp. HN2-3 2886360 species 5998443 2 1 0.0 +Pseudocitrobacter sp. G163CM 2891570 species 5015040 3 2 0.0 +Pseudomonas oryziphila 2894079 species 6049604 3 2 0.0 +Enterobacter sp. AN-K1 2894203 species 4656683 3 3 0.0 +Klebsiella sp. KPN54798 2897413 species 5647734 33 8 0.0 +Enterobacter cloacae complex sp. ECL414 2912628 species 5201118 385 356 0.0 +Enterobacter cloacae complex sp. ECL411 2912629 species 5561019 1 0 0.0 +Enterobacter cloacae complex sp. ECL405 2912630 species 5504413 1 0 0.0 +Enterobacter cloacae complex sp. ECL404 2912631 species 5420719 2 1 0.0 +Pseudomonas sp. LS.1a 2920387 species 5748595 1 1 0.0 +Raoultella sp. HC6 2923366 species 6243766 1 0 0.0 +Salmonella enterica subsp. enterica serovar Abeokuta 2926665 leaf 4957438 1 0 0.0