Mercurial > repos > kkonganti > cfsan_bettercallsal
annotate 0.7.0/workflows/conf/bettercallsal_db.config @ 19:4b304d77bbfb
planemo upload
| author | kkonganti |
|---|---|
| date | Mon, 15 Jul 2024 11:20:22 -0400 |
| parents | 0e7a0053e4a6 |
| children |
| rev | line source |
|---|---|
| kkonganti@17 | 1 params { |
| kkonganti@17 | 2 workflow_conceived_by = 'Kranti Konganti' |
| kkonganti@17 | 3 workflow_built_by = 'Kranti Konganti' |
| kkonganti@17 | 4 workflow_version = '0.7.0' |
| kkonganti@17 | 5 pdg_release = 'PDG000000002.2876' |
| kkonganti@17 | 6 ncbi_asm_suffix = '_genomic.fna.gz' |
| kkonganti@17 | 7 wcomp_serocol = false |
| kkonganti@17 | 8 wcomp_seronamecol = false |
| kkonganti@17 | 9 wcomp_acc_col = false |
| kkonganti@17 | 10 wcomp_target_acc_col = false |
| kkonganti@17 | 11 wcomp_complete_sero = false |
| kkonganti@17 | 12 wcomp_not_null_serovar = false |
| kkonganti@17 | 13 wcomp_num = false |
| kkonganti@17 | 14 wcomp_min_contig_size = false |
| kkonganti@17 | 15 wcomp_i = false |
| kkonganti@17 | 16 wsnp_serocol = false |
| kkonganti@17 | 17 wsnp_seronamecol = false |
| kkonganti@17 | 18 wsnp_acc_col = false |
| kkonganti@17 | 19 wsnp_target_acc_col = false |
| kkonganti@17 | 20 wsnp_complete_sero = true |
| kkonganti@17 | 21 wsnp_not_null_serovar = false |
| kkonganti@17 | 22 wsnp_num = false |
| kkonganti@17 | 23 wsnp_i = "'I 4,[5],12:i:-'" |
| kkonganti@17 | 24 genomes_chunk = 100 |
| kkonganti@17 | 25 mashsketch_run = true |
| kkonganti@17 | 26 mashsketch_l = true |
| kkonganti@17 | 27 mashsketch_I = false |
| kkonganti@17 | 28 mashsketch_C = false |
| kkonganti@17 | 29 mashsketch_k = 21 |
| kkonganti@17 | 30 mashsketch_s = 1000 |
| kkonganti@17 | 31 mashsketch_i = false |
| kkonganti@17 | 32 mashsketch_S = false |
| kkonganti@17 | 33 mashsketch_w = false |
| kkonganti@17 | 34 mashsketch_r = false |
| kkonganti@17 | 35 mashsketch_b = false |
| kkonganti@17 | 36 mashsketch_m = false |
| kkonganti@17 | 37 mashsketch_c = false |
| kkonganti@17 | 38 mashsketch_g = false |
| kkonganti@17 | 39 mashsketch_n = false |
| kkonganti@17 | 40 mashsketch_a = false |
| kkonganti@17 | 41 mashsketch_z = false |
| kkonganti@17 | 42 mashsketch_Z = false |
| kkonganti@17 | 43 } |