Mercurial > repos > kkonganti > cfsan_bettercallsal

comparison 0.5.0/workflows/conf/bettercallsal_db.config @ 1:365849f031fd

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"planemo upload"
author kkonganti
date Mon, 05 Jun 2023 18:48:51 -0400
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0:a4b1ee4b68b1 1:365849f031fd
1 params {
2 workflow_conceived_by = 'Kranti Konganti'
3 workflow_built_by = 'Kranti Konganti'
4 workflow_version = '0.5.0'
5 pdg_release = 'PDG000000002.2532'
6 ncbi_asm_suffix = '_genomic.fna.gz'
7 wcomp_serocol = false
8 wcomp_complete_sero = false
9 wcomp_not_null_serovar = false
10 wcomp_num = false
11 wcomp_min_contig_size = false
12 wcomp_i = false
13 wsnp_serocol = false
14 wsnp_complete_sero = true
15 wsnp_not_null_serovar = false
16 wsnp_num = false
17 wsnp_i = "'I 4,[5],12:i:-'"
18 genomes_chunk = 100
19 mashsketch_run = true
20 mashsketch_l = true
21 mashsketch_I = false
22 mashsketch_C = false
23 mashsketch_k = 21
24 mashsketch_s = 1000
25 mashsketch_i = false
26 mashsketch_S = false
27 mashsketch_w = false
28 mashsketch_r = false
29 mashsketch_b = false
30 mashsketch_m = false
31 mashsketch_c = false
32 mashsketch_g = false
33 mashsketch_n = false
34 mashsketch_a = false
35 mashsketch_z = false
36 mashsketch_Z = false
37 }