Mercurial > repos > kkonganti > cfsan_bettercallsal

comparison 0.5.0/modules/salmon/index/main.nf @ 9:a492d1511fb6

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"planemo upload"
author kkonganti
date Tue, 06 Jun 2023 11:26:39 -0400
parents 365849f031fd
children
comparison
equal deleted inserted replaced
8:22165d5e5e0a 9:a492d1511fb6
1 process SALMON_INDEX { 1 process SALMON_INDEX {
2 tag "$meta.id" 2 tag "$meta.id"
3 label "process_low" 3 label "process_low"
4 4
5 module (params.enable_module ? "${params.swmodulepath}${params.fs}salmon${params.fs}1.9.0" : null) 5 module (params.enable_module ? "${params.swmodulepath}${params.fs}salmon${params.fs}1.9.0" : null)
6 conda (params.enable_conda ? 'conda-forge::libgcc-ng bioconda::salmon=1.9.0' : null) 6 conda (params.enable_conda ? 'conda-forge::libgcc-ng bioconda::salmon=1.10.1' : null)
7 container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 7 container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
8 'https://depot.galaxyproject.org/singularity/salmon:1.9.0--h7e5ed60_1' : 8 'https://depot.galaxyproject.org/singularity/salmon:1.9.0--h7e5ed60_1' :
9 'quay.io/biocontainers/salmon:1.9.0--h7e5ed60_1' }" 9 'quay.io/biocontainers/salmon:1.9.0--h7e5ed60_1' }"
10 10
11 input: 11 input: