Mercurial > repos > kkonganti > cfsan_bettercallsal

comparison cfsan_bettercallsal.xml @ 21:4ce0e079377d tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload
author kkonganti
date Mon, 15 Jul 2024 12:01:00 -0400
parents 4b304d77bbfb
children
comparison
equal deleted inserted replaced
20:133571bf891f 21:4ce0e079377d
1 <tool id="cfsan_bettercallsal" name="bettercallsal" version="0.7.0+galaxy23.1"> 1 <tool id="cfsan_bettercallsal" name="bettercallsal" version="0.7.0+galaxy23.1">
2 <description>An automated workflow to assign Salmonella serotype based on NCBI Pathogen Detection Project for Salmonella.</description> 2 <description>An automated workflow to assign Salmonella serotype based on NCBI Pathogen Detection Project for Salmonella.</description>
3 <requirements> 3 <requirements>
4 <container type="docker">quay.io/biocontainers/nextflow:24.04.2--hdfd78af_0</container> 4 <container type="docker">quay.io/biocontainers/nextflow:24.04.3--hdfd78af_0</container>
5 </requirements> 5 </requirements>
6 <version_command>nextflow -version</version_command> 6 <version_command>nextflow -version</version_command>
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
8 input_path=\$(pwd)"/cpipes-input"; 8 input_path=\$(pwd)"/cpipes-input";
9 mkdir -p "\${input_path}" || exit 1; 9 mkdir -p "\${input_path}" || exit 1;