--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/0.6.1/conf/base.config	Tue Sep 05 11:51:40 2023 -0400
@@ -0,0 +1,58 @@
+plugins {
+    id 'nf-amazon'
+}
+
+params {
+    fs = File.separator
+    cfsanpipename = 'CPIPES'
+    center = 'CFSAN, FDA.'
+    libs = "${projectDir}${params.fs}lib"
+    modules = "${projectDir}${params.fs}modules"
+    projectconf = "${projectDir}${params.fs}conf"
+    assetsdir = "${projectDir}${params.fs}assets"
+    subworkflows = "${projectDir}${params.fs}subworkflows"
+    workflows = "${projectDir}${params.fs}workflows"
+    workflowsconf = "${workflows}${params.fs}conf"
+    routines = "${libs}${params.fs}routines"
+    toolshelp = "${libs}${params.fs}help"
+    swmodulepath = "${params.fs}nfs${params.fs}software${params.fs}modules"
+    tracereportsdir = "${launchDir}${params.fs}${cfsanpipename}-${params.pipeline}${params.fs}nextflow-reports"
+    dummyfile = "${projectDir}${params.fs}assets${params.fs}dummy_file.txt"
+    dummyfile2 = "${projectDir}${params.fs}assets${params.fs}dummy_file2.txt"
+    max_cpus = 10
+    linewidth = 80
+    pad = 32
+    pipeline = null
+    help = null
+    input = null
+    output = null
+    metadata = null
+    publish_dir_mode = "copy"
+    publish_dir_overwrite = true
+    user_email = null
+}
+
+dag {
+    enabled = true
+    file = "${params.tracereportsdir}${params.fs}${params.pipeline}_dag.html"
+    overwrite = true
+}
+
+report {
+    enabled = true
+    file = "${params.tracereportsdir}${params.fs}${params.pipeline}_exec_report.html"
+    overwrite = true
+}
+
+trace {
+    enabled = true
+    file = "${params.tracereportsdir}${params.fs}${params.pipeline}_exec_trace.txt"
+    overwrite = true
+}
+
+timeline {
+    enabled = true
+    file = "${params.tracereportsdir}${params.fs}${params.pipeline}_exec_timeline.html"
+    overwrite = true
+}
+