kkonganti@11: standard {
kkonganti@11:     process.executor = 'local'
kkonganti@11:     process.cpus = 1
kkonganti@11:     params.enable_conda = false
kkonganti@11:     params.enable_module = true
kkonganti@11:     singularity.enabled = false
kkonganti@11:     docker.enabled = false
kkonganti@11: }
kkonganti@11: 
kkonganti@11: stdkondagac {
kkonganti@11:     process.executor = 'local'
kkonganti@11:     process.cpus = 4
kkonganti@11:     params.enable_conda = true
kkonganti@11:     conda.enabled = true
kkonganti@11:     conda.useMicromamba = true
kkonganti@11:     params.enable_module = false
kkonganti@11:     singularity.enabled = false
kkonganti@11:     docker.enabled = false
kkonganti@11: }
kkonganti@11: 
kkonganti@11: stdcingularitygac {
kkonganti@11:     process.executor = 'local'
kkonganti@11:     process.cpus = 4
kkonganti@11:     params.enable_conda = false
kkonganti@11:     params.enable_module = false
kkonganti@11:     singularity.enabled = true
kkonganti@11:     singularity.autoMounts = true
kkonganti@11:     singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
kkonganti@11:     docker.enabled = false
kkonganti@11: }
kkonganti@11: 
kkonganti@11: raven {
kkonganti@11:     process.executor = 'slurm'
kkonganti@11:     process.queue = 'prod'
kkonganti@11:     process.memory = '10GB'
kkonganti@11:     process.cpus = 4
kkonganti@11:     params.enable_conda = false
kkonganti@11:     params.enable_module = true
kkonganti@11:     singularity.enabled = false
kkonganti@11:     docker.enabled = false
kkonganti@11:     clusterOptions = '--signal B:USR2'
kkonganti@11: }
kkonganti@11: 
kkonganti@11: eprod {
kkonganti@11:     process.executor = 'slurm'
kkonganti@11:     process.queue = 'lowmem,midmem,bigmem'
kkonganti@11:     process.memory = '10GB'
kkonganti@11:     process.cpus = 4
kkonganti@11:     params.enable_conda = false
kkonganti@11:     params.enable_module = true
kkonganti@11:     singularity.enabled = false
kkonganti@11:     docker.enabled = false
kkonganti@11:     clusterOptions = '--signal B:USR2'
kkonganti@11: }
kkonganti@11: 
kkonganti@11: eprodkonda {
kkonganti@11:     process.executor = 'slurm'
kkonganti@11:     process.queue = 'lowmem,midmem,bigmem'
kkonganti@11:     process.memory = '10GB'
kkonganti@11:     process.cpus = 4
kkonganti@11:     params.enable_conda = true
kkonganti@11:     conda.enabled = true
kkonganti@11:     conda.useMicromamba = true
kkonganti@11:     params.enable_module = false
kkonganti@11:     singularity.enabled = false
kkonganti@11:     singularity.autoMounts = true
kkonganti@11:     singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
kkonganti@11:     docker.enabled = false
kkonganti@11:     clusterOptions = '--signal B:USR2'
kkonganti@11: }
kkonganti@11: 
kkonganti@11: eprodcingularity {
kkonganti@11:     process.executor = 'slurm'
kkonganti@11:     process.queue = 'lowmem,midmem,bigmem'
kkonganti@11:     process.memory = '10GB'
kkonganti@11:     process.cpus = 4
kkonganti@11:     params.enable_conda = false
kkonganti@11:     params.enable_module = false
kkonganti@11:     singularity.enabled = true
kkonganti@11:     singularity.autoMounts = true
kkonganti@11:     singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
kkonganti@11:     docker.enabled = false
kkonganti@11:     clusterOptions = '--signal B:USR2'
kkonganti@11: }
kkonganti@11: 
kkonganti@11: cingularity {
kkonganti@11:     process.executor = 'slurm'
kkonganti@11:     process.queue = 'prod'
kkonganti@11:     process.memory = '10GB'
kkonganti@11:     process.cpus = 4
kkonganti@11:     singularity.enabled = true
kkonganti@11:     singularity.autoMounts = true
kkonganti@11:     singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
kkonganti@11:     docker.enabled = false
kkonganti@11:     params.enable_conda = false
kkonganti@11:     params.enable_module = false
kkonganti@11:     clusterOptions = '--signal B:USR2'
kkonganti@11: }
kkonganti@11: 
kkonganti@11: cingularitygac {
kkonganti@11:     process.executor = 'slurm'
kkonganti@11:     executor.$slurm.exitReadTimeout = 120000
kkonganti@11:     process.queue = 'centriflaken'
kkonganti@11:     process.cpus = 4
kkonganti@11:     singularity.enabled = true
kkonganti@11:     singularity.autoMounts = true
kkonganti@11:     singularity.runOptions = "-B ${params.input} -B ${params.bcs_root_dbdir}"
kkonganti@11:     docker.enabled = false
kkonganti@11:     params.enable_conda = false
kkonganti@11:     params.enable_module = false
kkonganti@11:     clusterOptions = '-n 1 --signal B:USR2'
kkonganti@11: }
kkonganti@11: 
kkonganti@11: konda {
kkonganti@11:     process.executor = 'slurm'
kkonganti@11:     process.queue = 'prod'
kkonganti@11:     process.memory = '10GB'
kkonganti@11:     process.cpus = 4
kkonganti@11:     singularity.enabled = false
kkonganti@11:     docker.enabled = false
kkonganti@11:     params.enable_conda = true
kkonganti@11:     conda.enabled = true
kkonganti@11:     conda.useMicromamba = true
kkonganti@11:     params.enable_module = false
kkonganti@11:     clusterOptions = '--signal B:USR2'
kkonganti@11: }
kkonganti@11: 
kkonganti@11: kondagac {
kkonganti@11:     process.executor = 'slurm'
kkonganti@11:     executor.$slurm.exitReadTimeout = 120000
kkonganti@15:     process.queue = 'q8cpu'
kkonganti@11:     process.cpus = 4
kkonganti@11:     singularity.enabled = false
kkonganti@11:     docker.enabled = false
kkonganti@11:     params.enable_conda = true
kkonganti@11:     conda.enabled = true
kkonganti@11:     conda.useMicromamba = true
kkonganti@11:     params.enable_module = false
kkonganti@11:     clusterOptions = '-n 1 --signal B:USR2'
kkonganti@11: }
kkonganti@11: 
kkonganti@11: cfsanawsbatch {
kkonganti@11:     process.executor = 'awsbatch'
kkonganti@11:     process.queue = 'cfsan-nf-batch-job-queue'
kkonganti@11:     aws.batch.cliPath = '/home/ec2-user/miniconda/bin/aws'
kkonganti@11:     aws.batch.region = 'us-east-1'
kkonganti@11:     aws.batch.volumes = ['/hpc/db:/hpc/db:ro', '/hpc/scratch:/hpc/scratch:rw']
kkonganti@11:     singularity.enabled = false
kkonganti@11:     singularity.autoMounts = true
kkonganti@11:     docker.enabled = true
kkonganti@11:     params.enable_conda = false
kkonganti@11:     conda.enabled = false
kkonganti@11:     conda.useMicromamba = false
kkonganti@11:     params.enable_module = false
kkonganti@11: }