Mercurial > repos > kkonganti > cfsan_bettercallsal

changeset 5:0fb33799f347

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"planemo upload"
author kkonganti
date Tue, 06 Jun 2023 09:59:21 -0400
parents fa1d249ca172
children 83ed52d5af32
files cfsan_bettercallsal.xml
diffstat 1 files changed, 4 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/cfsan_bettercallsal.xml	Tue Jun 06 09:51:44 2023 -0400
+++ b/cfsan_bettercallsal.xml	Tue Jun 06 09:59:21 2023 -0400
@@ -70,8 +70,10 @@
             </when>
             <when value="paired">
                 <param name="input_pair" type="data_collection" collection_type="list:paired" format="fastq,fastq.gz" label="List of Dataset pairs" />
-                <param name="fq_suffix" value="_R1_001.fastq.gz" type="text" label="Suffix of the R1 FASTQ"/>
-                <param name="fq2_suffix" value="_R2_001.fastq.gz" type="text" label="Suffix of the R2 FASTQ"/>
+                <param name="fq_suffix" value="_R1_001.fastq.gz" type="text" label="Suffix of the R1 FASTQ"
+                    help="For any data sets downloaded from NCBI into Galaxy, change this to _forward.fastq.gz suffix."/>
+                <param name="fq2_suffix" value="_R2_001.fastq.gz" type="text" label="Suffix of the R2 FASTQ"
+                    help="For any data sets downloaded from NCBI into Galaxy, change this to _reverse.fastq.gz suffix./>
             </when>
         </conditional>
         <param name="tuspy_n" optional="true" value="10" type="integer" label="Enter the number of top unique serotypes to retain after initial MASH screen step"