Mercurial > repos > kkonganti > cfsan_centriflaken

comparison cfsan_centriflaken.xml @ 91:046e57368d3b

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"planemo upload"
author kkonganti
date Thu, 14 Jul 2022 11:18:42 -0400
parents 1e4f33f27a58
children 295c2597a475
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90:1e4f33f27a58 91:046e57368d3b
109 <param name="pipeline" type="select" label="CPIPES Workflow name" 109 <param name="pipeline" type="select" label="CPIPES Workflow name"
110 help="Auto selected centriflaken_hy workflow for paired-end short reads."> 110 help="Auto selected centriflaken_hy workflow for paired-end short reads.">
111 <option value="centriflaken_hy" selected="true">centriflaken_hy</option> 111 <option value="centriflaken_hy" selected="true">centriflaken_hy</option>
112 </param> 112 </param>
113 <when value="centriflaken_hy"> 113 <when value="centriflaken_hy">
114 <param name="long_read_platform" value="N/A" type="text" optional="true" label="Mention long read sequencing platform and type" 114 <param name="long_read_platform" type="select" label="Mention long read sequencing platform and type"
115 help="THIS OPTION IS IGNORED IF THE INPUT READS ARE SHORT READS."/> 115 help="THIS OPTION IS IGNORED IF THE INPUT READS ARE SHORT READS.">
116 <option value="NA" selected="true">N/A</option>
117 </param>
116 </when> 118 </when>
117 </conditional> 119 </conditional>
118 <param name="fq_suffix" value="_R1_001.fastq.gz" type="text" label="Suffix of the R1 FASTQ"/> 120 <param name="fq_suffix" value="_R1_001.fastq.gz" type="text" label="Suffix of the R1 FASTQ"/>
119 <param name="fq2_suffix" value="_R2_001.fastq.gz" type="text" label="Suffix of the R2 FASTQ"/> 121 <param name="fq2_suffix" value="_R2_001.fastq.gz" type="text" label="Suffix of the R2 FASTQ"/>
120 </when> 122 </when>