Mercurial > repos > kkonganti > cfsan_centriflaken

comparison 0.4.2/nextflow.config @ 117:77672281b19b

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planemo upload
author kkonganti
date Wed, 03 Jul 2024 11:18:16 -0400
parents b6fcae1983cb
children a646fee152da
comparison
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116:b6fcae1983cb 117:77672281b19b
29 // Nextflow runtime profiles 29 // Nextflow runtime profiles
30 conda.cacheDir = '/tmp' 30 conda.cacheDir = '/tmp'
31 singularity.cacheDir = '/tmp' 31 singularity.cacheDir = '/tmp'
32 32
33 // Cleanup after running 33 // Cleanup after running
34 // cleanup = true 34 cleanup = true
35 35
36 profiles { 36 profiles {
37 standard { 37 standard {
38 process.executor = 'local' 38 process.executor = 'local'
39 process.cpus = 1 39 process.cpus = 1
152 gxkubernetes { 152 gxkubernetes {
153 process.executor = 'k8s' 153 process.executor = 'k8s'
154 k8s.namespace = 'galaxy' 154 k8s.namespace = 'galaxy'
155 k8s.serviceAccount = 'default' 155 k8s.serviceAccount = 'default'
156 k8s.maxErrorRetry = 3 156 k8s.maxErrorRetry = 3
157 k8s.storageMountPath = '/galaxy'
157 singularity.enabled = false 158 singularity.enabled = false
158 docker.enabled = true 159 docker.enabled = true
159 params.enable_conda = false 160 params.enable_conda = false
160 params.enable_module = false 161 params.enable_module = false
161 } 162 }