Mercurial > repos > kkonganti > cfsan_centriflaken

comparison 0.3.0/lib/help/spades.nf @ 97:8d7f482c64de

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"planemo upload"
author kkonganti
date Fri, 29 Jul 2022 11:11:07 -0400
parents 295c2597a475
children
comparison
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96:ef0b422978fd 97:8d7f482c64de
6 Map toolspecs = [:] 6 Map toolspecs = [:]
7 tool.text = [:] 7 tool.text = [:]
8 tool.helpparams = [:] 8 tool.helpparams = [:]
9 9
10 toolspecs = [ 10 toolspecs = [
11 'spades_run': [
12 clihelp: 'Run SPAdes assembler. Default: ' +
13 (params.spades_run ?: false),
14 cliflag: null,
15 clivalue: null
16 ],
11 'spades_isolate': [ 17 'spades_isolate': [
12 clihelp: 'This flag is highly recommended for high-coverage isolate and ' + 18 clihelp: 'This flag is highly recommended for high-coverage isolate and ' +
13 "multi-cell data. Defaut: ${params.spades_isolate}", 19 "multi-cell data. Defaut: ${params.spades_isolate}",
14 cliflag: '--isolate', 20 cliflag: '--isolate',
15 clivalue: (params.spades_isolate ? ' ' : '') 21 clivalue: (params.spades_isolate ? ' ' : '')