Mercurial > repos > kkonganti > cfsan_centriflaken

comparison cfsan_centriflaken.xml @ 41:c4cc8c015560

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"planemo upload"
author kkonganti
date Thu, 30 Jun 2022 12:45:14 -0400
parents 8ea952e3726e
children 153c387b0d48
comparison
equal deleted inserted replaced
40:8ea952e3726e 41:c4cc8c015560
35 #end if 35 #end if
36 #end if 36 #end if
37 --input \${pwd_path}/cpipes-input 37 --input \${pwd_path}/cpipes-input
38 --output \${pwd_path}/cpipes-output 38 --output \${pwd_path}/cpipes-output
39 --fq_suffix '${fq_suffix}' 39 --fq_suffix '${fq_suffix}'
40 #if ($fq_filter_by_len != "" and int($fq_filter_by_len) > 0): 40 #if ($fq_filter_by_len != ""):
41 --fq_filter_by_len $fq_filter_by_len 41 --fq_filter_by_len $fq_filter_by_len
42 #end if 42 #end if
43 --fq_filename_delim '${fq_filename_delim}' 43 --fq_filename_delim '${fq_filename_delim}'
44 --fq_filename_delim_idx $fq_filename_delim_idx 44 --fq_filename_delim_idx $fq_filename_delim_idx
45 --centrifuge_extract_bug '${centrifuge_extract_bug}' 45 --centrifuge_extract_bug '${centrifuge_extract_bug}'