Mercurial > repos > kkonganti > cfsan_centriflaken
diff cfsan_centriflaken.xml @ 84:de5b87ce9fe4
"planemo upload"
author | kkonganti |
---|---|
date | Wed, 13 Jul 2022 16:51:33 -0400 |
parents | 21149dc86243 |
children | 022230c283f2 |
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--- a/cfsan_centriflaken.xml Wed Jul 13 16:49:53 2022 -0400 +++ b/cfsan_centriflaken.xml Wed Jul 13 16:51:33 2022 -0400 @@ -10,7 +10,7 @@ pwd_path=\$(pwd); #if (str($input_read_type_cond.input_read_type) == "single_long"): #for _, $unpaired in enumerate($input_read_type_cond.input): - #if not $unpaired.name.endswith(('.fastq', '.fastq.gz')): + #if not str($unpaired.name).endswith(('.fastq', '.fastq.gz')): #set read1 = str($unpaired.name) + str('.') + str($unpaired.ext) #else: #set read1 = str($unpaired.name)