Mercurial > repos > kkonganti > cfsan_centriflaken
diff cfsan_centriflaken.xml @ 80:ffa207a73483
"planemo upload"
| author | kkonganti |
|---|---|
| date | Wed, 13 Jul 2022 16:40:14 -0400 |
| parents | 549972e56115 |
| children | e389a6f6aa3b |
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--- a/cfsan_centriflaken.xml Wed Jul 13 16:38:29 2022 -0400 +++ b/cfsan_centriflaken.xml Wed Jul 13 16:40:14 2022 -0400 @@ -10,7 +10,7 @@ pwd_path=\$(pwd); #if (str($input_read_type_cond.input_read_type) == "single_long"): #for _, $unpaired in enumerate($input_read_type_cond.input): - #if not ${unpaired}.endswith(('.fastq', '.fastq.gz')): + #if not $unpaired.ext.endswith(('fastq', 'fastq.gz')): #set read_R1 = str($unpaired.name) + str('.') + str($unpaired.ext) #else: #set read_R1 = str($unpaired.name)