# HG changeset patch
# User kkonganti
# Date 1656523265 14400
# Node ID 2fb6c7a719d4754b2850d2968958bcb007b2a735
# Parent  b9cd7722d51b2afe950f2199ce01739c33c1ef75
"planemo upload"

diff -r b9cd7722d51b -r 2fb6c7a719d4 cfsan_centriflaken.xml
--- a/cfsan_centriflaken.xml	Wed Jun 29 12:45:02 2022 -0400
+++ b/cfsan_centriflaken.xml	Wed Jun 29 13:21:05 2022 -0400
@@ -12,11 +12,10 @@
 	#end for
 	pwd_path=\$(pwd);
 	$__tool_directory__/0.2.1/cpipes
+    --pipeline $pipeline
     #if ($pipeline == "centriflaken"):
-        --pipeline $pipeline
         --fq_single_end true
     #elif ($pipeline == "centriflaken_hy"):
-        --pipeline $pipeline
         #if ($reads_lib_layout == "single"):
             --fq_single_end true
         #else: