# HG changeset patch
# User kkonganti
# Date 1656510021 14400
# Node ID 4774fc77e872c7e16b59b1fae8ee181f6efbe147
# Parent  0c42dc147b2922b874364fcff433673a532d8f6a
"planemo upload"

diff -r 0c42dc147b29 -r 4774fc77e872 cfsan_centriflaken.xml
--- a/cfsan_centriflaken.xml	Wed Jun 29 09:38:17 2022 -0400
+++ b/cfsan_centriflaken.xml	Wed Jun 29 09:40:21 2022 -0400
@@ -32,7 +32,7 @@
 	--flye_genome_size '${genome_size}'
 	-profile $runtime_profile
     -resume;
-    cp \${pwd_path}/cpipes-output/${pipeline}-multiqc/multiqc_report.html \${pwd_path}/;
+    cp cpipes-output/${pipeline}-multiqc/multiqc_report.html multiqc_report.html;
     ]]></command>
     <inputs>
         <param name="input" type="data_collection" collection_type="list" format="fastq,fastq.gz,fastqsanger.gz,fastqsanger" label="Input read collection" />