# HG changeset patch
# User kkonganti
# Date 1656529036 14400
# Node ID 9c06429a2ffbe2becd9c1e203fbc5806d22b93b5
# Parent  b928b20149a90acf4d82d3476e3c37c7cb364053
"planemo upload"

diff -r b928b20149a9 -r 9c06429a2ffb cfsan_centriflaken.xml
--- a/cfsan_centriflaken.xml	Wed Jun 29 14:45:10 2022 -0400
+++ b/cfsan_centriflaken.xml	Wed Jun 29 14:57:16 2022 -0400
@@ -19,7 +19,7 @@
         #if ($reads_lib_layout == "single"):
             --fq_single_end true
         #elif ($reads_lib_layout == "paired"):
-            --fq_single_end false
+            --fq_single_end false --fq2_suffix '${fq2_suffix}'
         #end if
     #end if
 	--input \${pwd_path}/cpipes-input