# HG changeset patch
# User kkonganti
# Date 1658324012 14400
# Node ID aefcf9bbaee5e6b238600bbea17608ec1cd5ce4a
# Parent  ca861be3159686677e93350cfdb935c58e51e3fd
"planemo upload"

diff -r ca861be31596 -r aefcf9bbaee5 0.3.0/modules/abricate/summary/main.nf
--- a/0.3.0/modules/abricate/summary/main.nf	Tue Jul 19 10:22:51 2022 -0400
+++ b/0.3.0/modules/abricate/summary/main.nf	Wed Jul 20 09:33:32 2022 -0400
@@ -46,6 +46,7 @@
             1> "abricate.\${db}.absum.txt"
 
         sed -i -e "s/.\${db}.ab.txt//" "abricate.\${db}.absum.txt"
+        sed -i -e 's/.assembly_filtered_contigs.fasta//' "abricate.\${db}.absum.txt"
 
         filenum=\$((filenum+1))
     done