# HG changeset patch # User kkonganti # Date 1657744814 14400 # Node ID ffa207a7348329e4a7f2b5a419f028cc2d931234 # Parent 549972e56115e0d2eec0995c4c171e416d17f690 "planemo upload" diff -r 549972e56115 -r ffa207a73483 cfsan_centriflaken.xml --- a/cfsan_centriflaken.xml Wed Jul 13 16:38:29 2022 -0400 +++ b/cfsan_centriflaken.xml Wed Jul 13 16:40:14 2022 -0400 @@ -10,7 +10,7 @@ pwd_path=\$(pwd); #if (str($input_read_type_cond.input_read_type) == "single_long"): #for _, $unpaired in enumerate($input_read_type_cond.input): - #if not ${unpaired}.endswith(('.fastq', '.fastq.gz')): + #if not $unpaired.ext.endswith(('fastq', 'fastq.gz')): #set read_R1 = str($unpaired.name) + str('.') + str($unpaired.ext) #else: #set read_R1 = str($unpaired.name)