Mercurial > repos > kkonganti > cfsan_centriflaken

changeset 140:7ab975454646

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planemo upload
author kkonganti
date Thu, 11 Jul 2024 12:47:02 -0400
parents c5daa29f933c
children 3bae471a5e14
files 0.4.2/conf/modules.config 0.4.2/nextflow.config
diffstat 2 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/0.4.2/conf/modules.config	Tue Jul 09 13:09:06 2024 -0400
+++ b/0.4.2/conf/modules.config	Thu Jul 11 12:47:02 2024 -0400
@@ -14,7 +14,7 @@
         ![0].contains(task.exitStatus) ? dynamic_retry(task.attempt, 10) : 'finish'
     }
 
-    maxRetries = 1
+    maxRetries = 0
 
     withLabel: 'process_femto' {
         cpus = { 1 * task.attempt }
--- a/0.4.2/nextflow.config	Tue Jul 09 13:09:06 2024 -0400
+++ b/0.4.2/nextflow.config	Thu Jul 11 12:47:02 2024 -0400
@@ -153,7 +153,7 @@
         process.executor = 'k8s'
         k8s.namespace = 'galaxy'
         k8s.serviceAccount = 'default'
-        k8s.maxErrorRetry = 3
+        k8s.computeResourceType = 'Job'
         k8s.pod = [
             [volumeClaim: 's3-centriflaken-claim', mountPath: '/galaxy/cfsan-centriflaken-db'],
             [volumeClaim: 's3-nextflow-claim', mountPath: '/galaxy/nf-work-dirs'],