--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/0.1.0/modules/custom/qual_passed_genomes/main.nf	Mon Nov 27 12:37:44 2023 -0500
@@ -0,0 +1,36 @@
+process QUAL_PASSED_GENOMES {
+    tag "Consolidate"
+    label "process_micro"
+
+    module (params.enable_module ? "${params.swmodulepath}${params.fs}python${params.fs}3.8.1" : null)
+    conda (params.enable_conda ? "conda-forge::python=3.10.4" : null)
+    container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
+        'https://depot.galaxyproject.org/singularity/python:3.10.4' :
+        'quay.io/biocontainers/python:3.10.4' }"
+
+    input:
+        path acc_passed_tool1
+        path acc_passed_tool2
+
+    output:
+        path 'accs_passed.txt', emit: accs
+        path 'versions.yml'   , emit: versions
+
+    when:
+        task.ext.when == null || task.ext.when
+
+    script:
+        def args = task.ext.args ?: ''
+        def prefix = task.index ?: ''
+        def output = 'accs_passed.txt'
+
+        """
+        qual_confirm.py \\
+            -f1 $acc_passed_tool1  \\
+            -f2 $acc_passed_tool2
+
+        cat <<-END_VERSIONS >> versions.yml
+            python: \$( python --version | sed 's/Python //g' )
+        END_VERSIONS
+        """
+}
\ No newline at end of file