Mercurial > repos > kkonganti > hfp_nowayout

changeset 3:63cb1cd8143b

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planemo upload
author kkonganti
date Mon, 31 Mar 2025 15:08:18 -0400
parents 463c7e606c77
children 9c9aeeb7ea4b
files hfp_nowayout.xml
diffstat 1 files changed, 14 insertions(+), 16 deletions(-) [+]
line wrap: on
line diff
--- a/hfp_nowayout.xml	Mon Mar 31 14:54:41 2025 -0400
+++ b/hfp_nowayout.xml	Mon Mar 31 15:08:18 2025 -0400
@@ -126,13 +126,13 @@
 
 .. class:: infomark
 
-** Databases **
+**Databases**
 
-    - mitomine: Big database that works in almost all scenarios.
-    - cytox1: Collection of only non-redundant COXI genes from NCBI.
-    - voucher: Collection of only non-redundant voucher sequences from NCBI.
-    - ganoderma: Collection of only non-redundant mtDNA sequences of Ganoderma fungi.
-    - listeria: Collection of organelle sequences and other rRNA genes for Listeria.
+    - *mitomine*: Big database that works in almost all scenarios.
+    - *cytox1*: Collection of only non-redundant COXI genes from NCBI.
+    - *voucher*: Collection of only non-redundant voucher sequences from NCBI.
+    - *ganoderma*: Collection of only non-redundant mtDNA sequences of Ganoderma fungi.
+    - *listeria*: Collection of organelle sequences and other rRNA genes for Listeria.
 
 
 ----
@@ -153,17 +153,15 @@
 
 .. class:: infomark
 
-** Please note **
+**Please note**
 
-    ::
-    
-        - nowayout only works on Illumina short reads (paired or unpaired).
-        - nowayout uses a custom kma database named mitomine.
-        - The custom database will be incrementally augmented and refined over time.
-        - mitomine stats:
-            Contains ~ 2.93M non-redundant mitochondrial and voucher sequences.
-            Represents ~ 717K unique species.
-        - Other databases are also available but will be seldom updated.
+    - *nowayout* only works on Illumina short reads (paired or unpaired).
+    - *nowayout* uses a custom kma database named *mitomine*.
+    - The custom database will be incrementally augmented and refined over time.
+    - *mitomine* stats:
+        Contains ~ 2.93M non-redundant mitochondrial and voucher sequences.
+        Represents ~ 717K unique species.
+    - Other databases are also available but will be seldom updated.
 
 ----