Mercurial > repos > kkonganti > lexmapr2_from_cfsan

comparison cfsan_lexmapr2.xml @ 23:e4215818a909 tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload"
author kkonganti
date Wed, 09 Nov 2022 10:29:25 -0500
parents 880f156d0454
children
comparison
equal deleted inserted replaced
22:880f156d0454 23:e4215818a909
62 <param name="graph" truevalue="-g" type="boolean" checked="false" 62 <param name="graph" truevalue="-g" type="boolean" checked="false"
63 label="Visualize summary of mapping and binning" help="Default: false. Turning on this option may increase run time."/> 63 label="Visualize summary of mapping and binning" help="Default: false. Turning on this option may increase run time."/>
64 <param name="full" truevalue="-f" type="boolean" checked="true" 64 <param name="full" truevalue="-f" type="boolean" checked="true"
65 label="Generate full output format" help="Default: true"/> 65 label="Generate full output format" help="Default: true"/>
66 <param name="no_ancestors" truevalue="-a" type="boolean" checked="false" 66 <param name="no_ancestors" truevalue="-a" type="boolean" checked="false"
67 label="Remove ancestral terms from output" help="Default: false"/> 67 label="Remove ancestral terms from output" help="Default: false. Turning on this option may increase run time."/>
68 </inputs> 68 </inputs>
69 <outputs> 69 <outputs>
70 <data name="lexmapr2_output" format="tsv" label="Lexmapr2: Results On ${on_string}" from_work_dir="lexmapr2_output.tsv"/> 70 <data name="lexmapr2_output" format="tsv" label="Lexmapr2: Results On ${on_string}" from_work_dir="lexmapr2_output.tsv"/>
71 <collection name="plots" type="list" label="Lexmapr2: Plots on ${on_string}"> 71 <collection name="plots" type="list" label="Lexmapr2: Plots on ${on_string}">
72 <discover_datasets pattern="(?P&lt;designation&gt;.+)\.png" format="png" directory="lexmapr_figures"/> 72 <discover_datasets pattern="(?P&lt;designation&gt;.+)\.png" format="png" directory="lexmapr_figures"/>
132 132
133 ]]></help> 133 ]]></help>
134 <citations> 134 <citations>
135 <citation type="bibtex"> 135 <citation type="bibtex">
136 @misc{github, 136 @misc{github,
137 author = {Penn, Kayla}, 137 author = {Penn, Kayla and Konganti, Kranti},
138 year = {2022}, 138 year = {2022},
139 title = {LexMapr2}, 139 title = {LexMapr2},
140 publisher = {GitHub}, 140 publisher = {GitHub},
141 journal = {GitHub repository}, 141 journal = {GitHub repository},
142 url = {https://github.com/CFSAN-Biostatistics/LexMapr2}} 142 url = {https://github.com/CFSAN-Biostatistics/LexMapr2}}