--- a/cfsan_lexmapr2.xml	Thu Sep 15 14:50:34 2022 -0400
+++ b/cfsan_lexmapr2.xml	Wed Nov 09 09:05:28 2022 -0500
@@ -56,10 +56,10 @@
             <when value="false">
             </when>
         </conditional>
-        <param name="bins" truevalue="-b" type="boolean" checked="true"
-            label="Classify samples into default bins" help="Default: true"/>
-        <param name="graph" truevalue="-g" type="boolean" checked="true"
-            label="Visualize summary of mapping and binning" help="Default: true"/>
+        <param name="bins" truevalue="-b" type="boolean" checked="false"
+            label="Classify samples into default bins" help="Default: false. Turning on this option may increase run time."/>
+        <param name="graph" truevalue="-g" type="boolean" checked="false"
+            label="Visualize summary of mapping and binning" help="Default: false. Turning on this option may increase run time."/>
         <param name="full" truevalue="-f" type="boolean" checked="true"
             label="Generate full output format" help="Default: true"/>
         <param name="no_ancestors" truevalue="-a" type="boolean" checked="false"