Mercurial > repos > rliterman > csp2
comparison CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/include/mash/CommandInfo.h @ 69:33d812a61356
planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
| author | jpayne |
|---|---|
| date | Tue, 18 Mar 2025 17:55:14 -0400 |
| parents | |
| children |
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| 67:0e9998148a16 | 69:33d812a61356 |
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| 1 // Copyright © 2015, Battelle National Biodefense Institute (BNBI); | |
| 2 // all rights reserved. Authored by: Brian Ondov, Todd Treangen, | |
| 3 // Sergey Koren, and Adam Phillippy | |
| 4 // | |
| 5 // See the LICENSE.txt file included with this software for license information. | |
| 6 | |
| 7 #ifndef INCLUDED_CommandInfo | |
| 8 #define INCLUDED_CommandInfo | |
| 9 | |
| 10 #include "Command.h" | |
| 11 #include "Sketch.h" | |
| 12 | |
| 13 namespace mash { | |
| 14 | |
| 15 class CommandInfo : public Command | |
| 16 { | |
| 17 public: | |
| 18 | |
| 19 CommandInfo(); | |
| 20 | |
| 21 int run() const; // override | |
| 22 | |
| 23 private: | |
| 24 | |
| 25 int printCounts(const Sketch & sketch) const; | |
| 26 int writeJson(const Sketch & sketch) const; | |
| 27 }; | |
| 28 | |
| 29 } // namespace mash | |
| 30 | |
| 31 #endif |