Mercurial > repos > rliterman > csp2

diff CSP2/conf/CSP2.yaml @ 0:01431fa12065

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"planemo upload"
author rliterman
date Mon, 02 Dec 2024 10:40:55 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/CSP2/conf/CSP2.yaml	Mon Dec 02 10:40:55 2024 -0500
@@ -0,0 +1,21 @@
+name: csp2_env
+
+channels:
+  - bioconda
+  - conda-forge
+  - defaults
+
+dependencies:
+  - python=3.8.1
+  - bedtools
+  - mash
+  - skesa
+  - mummer
+  - bbmap
+  - pip
+  - pip:
+    - pybedtools
+    - scikit-learn
+    - pandas
+    - Bio
+    - datetime