Mercurial > repos > rliterman > csp2

diff CSP2/subworkflows/fetchData/main.nf @ 15:0d775868ee62

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"planemo upload"
author rliterman
date Tue, 03 Dec 2024 12:23:38 -0500
parents 00aa43a565d1
children eda1a8a50746
line wrap: on
line diff
--- a/CSP2/subworkflows/fetchData/main.nf	Tue Dec 03 11:09:33 2024 -0500
+++ b/CSP2/subworkflows/fetchData/main.nf	Tue Dec 03 12:23:38 2024 -0500
@@ -493,8 +493,10 @@
     assembled_data = assembly_output.map{it->tuple(it[0],it[3])}
 }
 process skesaAssemble{
-    memory '12 GB' // Add readcount/memory check?
+    label 'skesaMem'
 
+    cpus = skesa_cpus
+    
     input:
     tuple val(sample_name),val(read_type),val(read_location)