--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/mummer-3.23/scripts/tandem-repeat.awk	Tue Mar 18 17:55:14 2025 -0400
@@ -0,0 +1,23 @@
+# Usage:  awk -f tandem-repeat.awk
+#   Outputs tandem repeat regions based on repeat matches found
+#   by  repeat-match  program.  That program should be run with
+#   the  -t  option (for tandem repeats) or at least the -f
+#   option (fo forward strand only), and the output
+#   sorted by first and then second column (with the first two
+#   header lines removed).
+
+BEGIN   {
+         printf "%8s %8s %8s %10s\n", "Start", "Extent", "UnitLen", "Copies";
+        }
+
+        {
+         if  ($1 + $3 < $2)
+             next;
+         if  ($1 == prev)
+             next;
+         start = $1;
+         extent = $2 + $3 - $1;
+         unitlen = $2 - $1;
+         printf "%8d %8d %8d %10.1f\n", start, extent, unitlen, extent / unitlen;
+         prev = $1;
+        }