Mercurial > repos > rliterman > csp2

diff CSP2/bin/userSNPDiffs.py @ 27:792274118b2e

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"planemo upload"
author rliterman
date Wed, 04 Dec 2024 12:50:59 -0500
parents 01431fa12065
children 893a6993efe3
line wrap: on
line diff
--- a/CSP2/bin/userSNPDiffs.py	Tue Dec 03 16:35:35 2024 -0500
+++ b/CSP2/bin/userSNPDiffs.py	Wed Dec 04 12:50:59 2024 -0500
@@ -31,7 +31,7 @@
 
 parser = argparse.ArgumentParser()
 parser.add_argument("--snpdiffs_file", help="Path to the SNP diffs list file")
-parser.add_argument("--trim_name", help="Trim name")
+parser.add_argument('--trim_name', type=str, default="", help='trim name')
 args = parser.parse_args()
 
 snpdiffs_list_file = args.snpdiffs_file