Mercurial > repos > rliterman > csp2
diff CSP2/bin/fetchReads.py @ 28:893a6993efe3
"planemo upload"
author | rliterman |
---|---|
date | Wed, 04 Dec 2024 13:48:13 -0500 |
parents | 792274118b2e |
children |
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--- a/CSP2/bin/fetchReads.py Wed Dec 04 12:50:59 2024 -0500 +++ b/CSP2/bin/fetchReads.py Wed Dec 04 13:48:13 2024 -0500 @@ -11,7 +11,7 @@ parser.add_argument('--read_filetype',default='fastq.gz', type=str, help='read filetype information') parser.add_argument('--forward_suffix',default='_1.fastq.gz', type=str, help='forward suffix') parser.add_argument('--reverse_suffix',default = '_2.fastq.gz', type=str, help='reverse suffix') -parser.add_argument('--trim_name', type=str, default="", help='trim name') +parser.add_argument('--trim_name', nargs='?', const="", default="", type=str, help='Trim name') args = parser.parse_args() # Get path to directory containing read files