Mercurial > repos > rliterman > csp2

diff CSP2/bin/saveSNPDiffs.py @ 28:893a6993efe3

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload"
author rliterman
date Wed, 04 Dec 2024 13:48:13 -0500
parents 792274118b2e
children 93393808f415
line wrap: on
line diff
--- a/CSP2/bin/saveSNPDiffs.py	Wed Dec 04 12:50:59 2024 -0500
+++ b/CSP2/bin/saveSNPDiffs.py	Wed Dec 04 13:48:13 2024 -0500
@@ -30,7 +30,7 @@
 parser.add_argument("--snpdiffs_file", help="Path to the SNP diffs list file")
 parser.add_argument("--summary_file", help="Path to the summary file")
 parser.add_argument("--isolate_file", help="Path to the isolate data file")
-parser.add_argument('--trim_name', type=str, default="", help='trim name')
+parser.add_argument('--trim_name', nargs='?', const="", default="", type=str, help='Trim name')
 parser.add_argument("--ref_id_file", help="Path to the reference IDs file")
 args = parser.parse_args()