Mercurial > repos > rliterman > csp2
diff CSP2/bin/screenSNPDiffs.py @ 28:893a6993efe3
"planemo upload"
author | rliterman |
---|---|
date | Wed, 04 Dec 2024 13:48:13 -0500 |
parents | 792274118b2e |
children | 93393808f415 |
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--- a/CSP2/bin/screenSNPDiffs.py Wed Dec 04 12:50:59 2024 -0500 +++ b/CSP2/bin/screenSNPDiffs.py Wed Dec 04 13:48:13 2024 -0500 @@ -555,7 +555,7 @@ parser.add_argument("--query_edge", default=150,type=int, help="Query edge") parser.add_argument("--density_windows",default="1000,125,15", help="Density windows (comma-separated)") parser.add_argument("--max_snps", default="3,2,1",help="Maximum SNPs (comma-separated)") -parser.add_argument('--trim_name', type=str, default="", help='trim name') +parser.add_argument('--trim_name', nargs='?', const="", default="", type=str, help='Trim name') parser.add_argument("--output_file", help="Output file") parser.add_argument("--ref_id", help="Reference IDs file") parser.add_argument("--tmp_dir",default="", help="TMP dir")