Mercurial > repos > rliterman > csp2
view CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/lib/python3.8/site-packages/pysam/libctabix.c @ 69:33d812a61356
planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
| author | jpayne |
|---|---|
| date | Tue, 18 Mar 2025 17:55:14 -0400 |
| parents | |
| children |
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/* Generated by Cython 3.0.11 */ /* BEGIN: Cython Metadata { "distutils": { "define_macros": [ [ "BUILDING_WHEEL", null ] ], "depends": [ "/project/htslib/htslib/bgzf.h", "/project/htslib/htslib/cram.h", "/project/htslib/htslib/faidx.h", "/project/htslib/htslib/hfile.h", "/project/htslib/htslib/hts.h", "/project/htslib/htslib/kstring.h", "/project/htslib/htslib/sam.h", "/project/htslib/htslib/tbx.h", "/project/htslib/htslib/vcf.h", "/project/htslib/htslib/vcfutils.h", "/project/pysam/htslib_util.h", "/project/pysam/pysam_stream.h" ], "extra_compile_args": [ "-Wno-unused", "-Wno-strict-prototypes", "-Wno-sign-compare", "-Wno-error=declaration-after-statement" ], "extra_link_args": [ "-Wl,-rpath,$ORIGIN" ], "include_dirs": [ "pysam", "/project/pysam", "/project/htslib", "/project/samtools", "/project/samtools/lz4", "/project/bcftools", "/project" ], "language": "c", "libraries": [ "z", "lzma", "bz2", "z", "m", "curl", "crypto", "chtslib.cpython-37m-x86_64-linux-gnu", "cutils.cpython-37m-x86_64-linux-gnu" ], "library_dirs": [ "/project/pysam", "/project", "build/lib.linux-x86_64-cpython-37/pysam", "build/lib.linux-x86_64-cpython-37/pysam", "build/lib.linux-x86_64-cpython-37/pysam", "build/lib.linux-x86_64-cpython-37/pysam", "build/lib.linux-x86_64-cpython-37/pysam", "build/lib.linux-x86_64-cpython-37/pysam", "build/lib.linux-x86_64-cpython-37/pysam", "build/lib.linux-x86_64-cpython-37/pysam" ], "name": "pysam.libctabix", "sources": [ "pysam/libctabix.pyx" ] }, "module_name": "pysam.libctabix" } END: Cython Metadata */ #ifndef PY_SSIZE_T_CLEAN #define PY_SSIZE_T_CLEAN #endif /* PY_SSIZE_T_CLEAN */ #if defined(CYTHON_LIMITED_API) && 0 #ifndef Py_LIMITED_API #if CYTHON_LIMITED_API+0 > 0x03030000 #define Py_LIMITED_API CYTHON_LIMITED_API #else #define Py_LIMITED_API 0x03030000 #endif #endif #endif #include "Python.h" #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyFloat_FromString(obj) PyFloat_FromString(obj) #else #define __Pyx_PyFloat_FromString(obj) PyFloat_FromString(obj, NULL) #endif #if PY_MAJOR_VERSION <= 2 #define PyDict_GetItemWithError _PyDict_GetItemWithError #endif #if (PY_VERSION_HEX < 0x030700b1 || (CYTHON_COMPILING_IN_PYPY && PYPY_VERSION_NUM < 0x07030600)) && !defined(PyContextVar_Get) #define PyContextVar_Get(var, d, v) ((d) ? ((void)(var), Py_INCREF(d), (v)[0] = (d), 0) : ((v)[0] = NULL, 0) ) #endif #ifndef Py_PYTHON_H #error Python headers needed to compile C extensions, please install development version of Python. #elif PY_VERSION_HEX < 0x02070000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03030000) #error Cython requires Python 2.7+ or Python 3.3+. #else #if defined(CYTHON_LIMITED_API) && CYTHON_LIMITED_API #define __PYX_EXTRA_ABI_MODULE_NAME "limited" #else #define __PYX_EXTRA_ABI_MODULE_NAME "" #endif #define CYTHON_ABI "3_0_11" __PYX_EXTRA_ABI_MODULE_NAME #define __PYX_ABI_MODULE_NAME "_cython_" CYTHON_ABI #define __PYX_TYPE_MODULE_PREFIX __PYX_ABI_MODULE_NAME "." #define CYTHON_HEX_VERSION 0x03000BF0 #define CYTHON_FUTURE_DIVISION 1 #include <stddef.h> #ifndef offsetof #define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) #endif #if !defined(_WIN32) && !defined(WIN32) && !defined(MS_WINDOWS) #ifndef __stdcall #define __stdcall #endif #ifndef __cdecl #define __cdecl #endif #ifndef __fastcall #define __fastcall #endif #endif #ifndef DL_IMPORT #define DL_IMPORT(t) t #endif #ifndef DL_EXPORT #define DL_EXPORT(t) t #endif #define __PYX_COMMA , #ifndef HAVE_LONG_LONG #define HAVE_LONG_LONG #endif #ifndef PY_LONG_LONG #define PY_LONG_LONG LONG_LONG #endif #ifndef Py_HUGE_VAL #define Py_HUGE_VAL HUGE_VAL #endif #define __PYX_LIMITED_VERSION_HEX PY_VERSION_HEX #if defined(GRAALVM_PYTHON) /* For very preliminary testing purposes. Most variables are set the same as PyPy. The existence of this section does not imply that anything works or is even tested */ #define CYTHON_COMPILING_IN_PYPY 0 #define CYTHON_COMPILING_IN_CPYTHON 0 #define CYTHON_COMPILING_IN_LIMITED_API 0 #define CYTHON_COMPILING_IN_GRAAL 1 #define CYTHON_COMPILING_IN_NOGIL 0 #undef CYTHON_USE_TYPE_SLOTS #define CYTHON_USE_TYPE_SLOTS 0 #undef CYTHON_USE_TYPE_SPECS #define CYTHON_USE_TYPE_SPECS 0 #undef CYTHON_USE_PYTYPE_LOOKUP #define CYTHON_USE_PYTYPE_LOOKUP 0 #if PY_VERSION_HEX < 0x03050000 #undef CYTHON_USE_ASYNC_SLOTS #define CYTHON_USE_ASYNC_SLOTS 0 #elif !defined(CYTHON_USE_ASYNC_SLOTS) #define CYTHON_USE_ASYNC_SLOTS 1 #endif #undef CYTHON_USE_PYLIST_INTERNALS #define CYTHON_USE_PYLIST_INTERNALS 0 #undef CYTHON_USE_UNICODE_INTERNALS #define CYTHON_USE_UNICODE_INTERNALS 0 #undef CYTHON_USE_UNICODE_WRITER #define CYTHON_USE_UNICODE_WRITER 0 #undef CYTHON_USE_PYLONG_INTERNALS #define CYTHON_USE_PYLONG_INTERNALS 0 #undef CYTHON_AVOID_BORROWED_REFS #define CYTHON_AVOID_BORROWED_REFS 1 #undef CYTHON_ASSUME_SAFE_MACROS #define CYTHON_ASSUME_SAFE_MACROS 0 #undef CYTHON_UNPACK_METHODS #define CYTHON_UNPACK_METHODS 0 #undef CYTHON_FAST_THREAD_STATE #define CYTHON_FAST_THREAD_STATE 0 #undef CYTHON_FAST_GIL #define CYTHON_FAST_GIL 0 #undef CYTHON_METH_FASTCALL #define CYTHON_METH_FASTCALL 0 #undef CYTHON_FAST_PYCALL #define CYTHON_FAST_PYCALL 0 #ifndef CYTHON_PEP487_INIT_SUBCLASS #define CYTHON_PEP487_INIT_SUBCLASS (PY_MAJOR_VERSION >= 3) #endif #undef CYTHON_PEP489_MULTI_PHASE_INIT #define CYTHON_PEP489_MULTI_PHASE_INIT 1 #undef CYTHON_USE_MODULE_STATE #define CYTHON_USE_MODULE_STATE 0 #undef CYTHON_USE_TP_FINALIZE #define CYTHON_USE_TP_FINALIZE 0 #undef CYTHON_USE_DICT_VERSIONS #define CYTHON_USE_DICT_VERSIONS 0 #undef CYTHON_USE_EXC_INFO_STACK #define CYTHON_USE_EXC_INFO_STACK 0 #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC #define CYTHON_UPDATE_DESCRIPTOR_DOC 0 #endif #undef CYTHON_USE_FREELISTS #define CYTHON_USE_FREELISTS 0 #elif defined(PYPY_VERSION) #define CYTHON_COMPILING_IN_PYPY 1 #define CYTHON_COMPILING_IN_CPYTHON 0 #define CYTHON_COMPILING_IN_LIMITED_API 0 #define CYTHON_COMPILING_IN_GRAAL 0 #define CYTHON_COMPILING_IN_NOGIL 0 #undef CYTHON_USE_TYPE_SLOTS #define CYTHON_USE_TYPE_SLOTS 0 #ifndef CYTHON_USE_TYPE_SPECS #define CYTHON_USE_TYPE_SPECS 0 #endif #undef CYTHON_USE_PYTYPE_LOOKUP #define CYTHON_USE_PYTYPE_LOOKUP 0 #if PY_VERSION_HEX < 0x03050000 #undef CYTHON_USE_ASYNC_SLOTS #define CYTHON_USE_ASYNC_SLOTS 0 #elif !defined(CYTHON_USE_ASYNC_SLOTS) #define CYTHON_USE_ASYNC_SLOTS 1 #endif #undef CYTHON_USE_PYLIST_INTERNALS #define CYTHON_USE_PYLIST_INTERNALS 0 #undef CYTHON_USE_UNICODE_INTERNALS #define CYTHON_USE_UNICODE_INTERNALS 0 #undef CYTHON_USE_UNICODE_WRITER #define CYTHON_USE_UNICODE_WRITER 0 #undef CYTHON_USE_PYLONG_INTERNALS #define CYTHON_USE_PYLONG_INTERNALS 0 #undef CYTHON_AVOID_BORROWED_REFS #define CYTHON_AVOID_BORROWED_REFS 1 #undef CYTHON_ASSUME_SAFE_MACROS #define CYTHON_ASSUME_SAFE_MACROS 0 #undef CYTHON_UNPACK_METHODS #define CYTHON_UNPACK_METHODS 0 #undef CYTHON_FAST_THREAD_STATE #define CYTHON_FAST_THREAD_STATE 0 #undef CYTHON_FAST_GIL #define CYTHON_FAST_GIL 0 #undef CYTHON_METH_FASTCALL #define CYTHON_METH_FASTCALL 0 #undef CYTHON_FAST_PYCALL #define CYTHON_FAST_PYCALL 0 #ifndef CYTHON_PEP487_INIT_SUBCLASS #define CYTHON_PEP487_INIT_SUBCLASS (PY_MAJOR_VERSION >= 3) #endif #if PY_VERSION_HEX < 0x03090000 #undef CYTHON_PEP489_MULTI_PHASE_INIT #define CYTHON_PEP489_MULTI_PHASE_INIT 0 #elif !defined(CYTHON_PEP489_MULTI_PHASE_INIT) #define CYTHON_PEP489_MULTI_PHASE_INIT 1 #endif #undef CYTHON_USE_MODULE_STATE #define CYTHON_USE_MODULE_STATE 0 #undef CYTHON_USE_TP_FINALIZE #define CYTHON_USE_TP_FINALIZE (PY_VERSION_HEX >= 0x030400a1 && PYPY_VERSION_NUM >= 0x07030C00) #undef CYTHON_USE_DICT_VERSIONS #define CYTHON_USE_DICT_VERSIONS 0 #undef CYTHON_USE_EXC_INFO_STACK #define CYTHON_USE_EXC_INFO_STACK 0 #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC #define CYTHON_UPDATE_DESCRIPTOR_DOC 0 #endif #undef CYTHON_USE_FREELISTS #define CYTHON_USE_FREELISTS 0 #elif defined(CYTHON_LIMITED_API) #ifdef Py_LIMITED_API #undef __PYX_LIMITED_VERSION_HEX #define __PYX_LIMITED_VERSION_HEX Py_LIMITED_API #endif #define CYTHON_COMPILING_IN_PYPY 0 #define CYTHON_COMPILING_IN_CPYTHON 0 #define CYTHON_COMPILING_IN_LIMITED_API 1 #define CYTHON_COMPILING_IN_GRAAL 0 #define CYTHON_COMPILING_IN_NOGIL 0 #undef CYTHON_CLINE_IN_TRACEBACK #define CYTHON_CLINE_IN_TRACEBACK 0 #undef CYTHON_USE_TYPE_SLOTS #define CYTHON_USE_TYPE_SLOTS 0 #undef CYTHON_USE_TYPE_SPECS #define CYTHON_USE_TYPE_SPECS 1 #undef CYTHON_USE_PYTYPE_LOOKUP #define CYTHON_USE_PYTYPE_LOOKUP 0 #undef CYTHON_USE_ASYNC_SLOTS #define CYTHON_USE_ASYNC_SLOTS 0 #undef CYTHON_USE_PYLIST_INTERNALS #define CYTHON_USE_PYLIST_INTERNALS 0 #undef CYTHON_USE_UNICODE_INTERNALS #define CYTHON_USE_UNICODE_INTERNALS 0 #ifndef CYTHON_USE_UNICODE_WRITER #define CYTHON_USE_UNICODE_WRITER 0 #endif #undef CYTHON_USE_PYLONG_INTERNALS #define CYTHON_USE_PYLONG_INTERNALS 0 #ifndef CYTHON_AVOID_BORROWED_REFS #define CYTHON_AVOID_BORROWED_REFS 0 #endif #undef CYTHON_ASSUME_SAFE_MACROS #define CYTHON_ASSUME_SAFE_MACROS 0 #undef CYTHON_UNPACK_METHODS #define CYTHON_UNPACK_METHODS 0 #undef CYTHON_FAST_THREAD_STATE #define CYTHON_FAST_THREAD_STATE 0 #undef CYTHON_FAST_GIL #define CYTHON_FAST_GIL 0 #undef CYTHON_METH_FASTCALL #define CYTHON_METH_FASTCALL 0 #undef CYTHON_FAST_PYCALL #define CYTHON_FAST_PYCALL 0 #ifndef CYTHON_PEP487_INIT_SUBCLASS #define CYTHON_PEP487_INIT_SUBCLASS 1 #endif #undef CYTHON_PEP489_MULTI_PHASE_INIT #define CYTHON_PEP489_MULTI_PHASE_INIT 0 #undef CYTHON_USE_MODULE_STATE #define CYTHON_USE_MODULE_STATE 1 #ifndef CYTHON_USE_TP_FINALIZE #define CYTHON_USE_TP_FINALIZE 0 #endif #undef CYTHON_USE_DICT_VERSIONS #define CYTHON_USE_DICT_VERSIONS 0 #undef CYTHON_USE_EXC_INFO_STACK #define CYTHON_USE_EXC_INFO_STACK 0 #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC #define CYTHON_UPDATE_DESCRIPTOR_DOC 0 #endif #undef CYTHON_USE_FREELISTS #define CYTHON_USE_FREELISTS 0 #elif defined(Py_GIL_DISABLED) || defined(Py_NOGIL) #define CYTHON_COMPILING_IN_PYPY 0 #define CYTHON_COMPILING_IN_CPYTHON 0 #define CYTHON_COMPILING_IN_LIMITED_API 0 #define CYTHON_COMPILING_IN_GRAAL 0 #define CYTHON_COMPILING_IN_NOGIL 1 #ifndef CYTHON_USE_TYPE_SLOTS #define CYTHON_USE_TYPE_SLOTS 1 #endif #ifndef CYTHON_USE_TYPE_SPECS #define CYTHON_USE_TYPE_SPECS 0 #endif #undef CYTHON_USE_PYTYPE_LOOKUP #define CYTHON_USE_PYTYPE_LOOKUP 0 #ifndef CYTHON_USE_ASYNC_SLOTS #define CYTHON_USE_ASYNC_SLOTS 1 #endif #ifndef CYTHON_USE_PYLONG_INTERNALS #define CYTHON_USE_PYLONG_INTERNALS 0 #endif #undef CYTHON_USE_PYLIST_INTERNALS #define CYTHON_USE_PYLIST_INTERNALS 0 #ifndef CYTHON_USE_UNICODE_INTERNALS #define CYTHON_USE_UNICODE_INTERNALS 1 #endif #undef CYTHON_USE_UNICODE_WRITER #define CYTHON_USE_UNICODE_WRITER 0 #ifndef CYTHON_AVOID_BORROWED_REFS #define CYTHON_AVOID_BORROWED_REFS 0 #endif #ifndef CYTHON_ASSUME_SAFE_MACROS #define CYTHON_ASSUME_SAFE_MACROS 1 #endif #ifndef CYTHON_UNPACK_METHODS #define CYTHON_UNPACK_METHODS 1 #endif #undef CYTHON_FAST_THREAD_STATE #define CYTHON_FAST_THREAD_STATE 0 #undef CYTHON_FAST_GIL #define CYTHON_FAST_GIL 0 #ifndef CYTHON_METH_FASTCALL #define CYTHON_METH_FASTCALL 1 #endif #undef CYTHON_FAST_PYCALL #define CYTHON_FAST_PYCALL 0 #ifndef CYTHON_PEP487_INIT_SUBCLASS #define CYTHON_PEP487_INIT_SUBCLASS 1 #endif #ifndef CYTHON_PEP489_MULTI_PHASE_INIT #define CYTHON_PEP489_MULTI_PHASE_INIT 1 #endif #ifndef CYTHON_USE_MODULE_STATE #define CYTHON_USE_MODULE_STATE 0 #endif #ifndef CYTHON_USE_TP_FINALIZE #define CYTHON_USE_TP_FINALIZE 1 #endif #undef CYTHON_USE_DICT_VERSIONS #define CYTHON_USE_DICT_VERSIONS 0 #undef CYTHON_USE_EXC_INFO_STACK #define CYTHON_USE_EXC_INFO_STACK 0 #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC #define CYTHON_UPDATE_DESCRIPTOR_DOC 1 #endif #ifndef CYTHON_USE_FREELISTS #define CYTHON_USE_FREELISTS 0 #endif #else #define CYTHON_COMPILING_IN_PYPY 0 #define CYTHON_COMPILING_IN_CPYTHON 1 #define CYTHON_COMPILING_IN_LIMITED_API 0 #define CYTHON_COMPILING_IN_GRAAL 0 #define CYTHON_COMPILING_IN_NOGIL 0 #ifndef CYTHON_USE_TYPE_SLOTS #define CYTHON_USE_TYPE_SLOTS 1 #endif #ifndef CYTHON_USE_TYPE_SPECS #define CYTHON_USE_TYPE_SPECS 0 #endif #ifndef CYTHON_USE_PYTYPE_LOOKUP #define CYTHON_USE_PYTYPE_LOOKUP 1 #endif #if PY_MAJOR_VERSION < 3 #undef CYTHON_USE_ASYNC_SLOTS #define CYTHON_USE_ASYNC_SLOTS 0 #elif !defined(CYTHON_USE_ASYNC_SLOTS) #define CYTHON_USE_ASYNC_SLOTS 1 #endif #ifndef CYTHON_USE_PYLONG_INTERNALS #define CYTHON_USE_PYLONG_INTERNALS 1 #endif #ifndef CYTHON_USE_PYLIST_INTERNALS #define CYTHON_USE_PYLIST_INTERNALS 1 #endif #ifndef CYTHON_USE_UNICODE_INTERNALS #define CYTHON_USE_UNICODE_INTERNALS 1 #endif #if PY_VERSION_HEX < 0x030300F0 || PY_VERSION_HEX >= 0x030B00A2 #undef CYTHON_USE_UNICODE_WRITER #define CYTHON_USE_UNICODE_WRITER 0 #elif !defined(CYTHON_USE_UNICODE_WRITER) #define CYTHON_USE_UNICODE_WRITER 1 #endif #ifndef CYTHON_AVOID_BORROWED_REFS #define CYTHON_AVOID_BORROWED_REFS 0 #endif #ifndef CYTHON_ASSUME_SAFE_MACROS #define CYTHON_ASSUME_SAFE_MACROS 1 #endif #ifndef CYTHON_UNPACK_METHODS #define CYTHON_UNPACK_METHODS 1 #endif #ifndef CYTHON_FAST_THREAD_STATE #define CYTHON_FAST_THREAD_STATE 1 #endif #ifndef CYTHON_FAST_GIL #define CYTHON_FAST_GIL (PY_MAJOR_VERSION < 3 || PY_VERSION_HEX >= 0x03060000 && PY_VERSION_HEX < 0x030C00A6) #endif #ifndef CYTHON_METH_FASTCALL #define CYTHON_METH_FASTCALL (PY_VERSION_HEX >= 0x030700A1) #endif #ifndef CYTHON_FAST_PYCALL #define CYTHON_FAST_PYCALL 1 #endif #ifndef CYTHON_PEP487_INIT_SUBCLASS #define CYTHON_PEP487_INIT_SUBCLASS 1 #endif #if PY_VERSION_HEX < 0x03050000 #undef CYTHON_PEP489_MULTI_PHASE_INIT #define CYTHON_PEP489_MULTI_PHASE_INIT 0 #elif !defined(CYTHON_PEP489_MULTI_PHASE_INIT) #define CYTHON_PEP489_MULTI_PHASE_INIT 1 #endif #ifndef CYTHON_USE_MODULE_STATE #define CYTHON_USE_MODULE_STATE 0 #endif #if PY_VERSION_HEX < 0x030400a1 #undef CYTHON_USE_TP_FINALIZE #define CYTHON_USE_TP_FINALIZE 0 #elif !defined(CYTHON_USE_TP_FINALIZE) #define CYTHON_USE_TP_FINALIZE 1 #endif #if PY_VERSION_HEX < 0x030600B1 #undef CYTHON_USE_DICT_VERSIONS #define CYTHON_USE_DICT_VERSIONS 0 #elif !defined(CYTHON_USE_DICT_VERSIONS) #define CYTHON_USE_DICT_VERSIONS (PY_VERSION_HEX < 0x030C00A5) #endif #if PY_VERSION_HEX < 0x030700A3 #undef CYTHON_USE_EXC_INFO_STACK #define CYTHON_USE_EXC_INFO_STACK 0 #elif !defined(CYTHON_USE_EXC_INFO_STACK) #define CYTHON_USE_EXC_INFO_STACK 1 #endif #ifndef CYTHON_UPDATE_DESCRIPTOR_DOC #define CYTHON_UPDATE_DESCRIPTOR_DOC 1 #endif #ifndef CYTHON_USE_FREELISTS #define CYTHON_USE_FREELISTS 1 #endif #endif #if !defined(CYTHON_FAST_PYCCALL) #define CYTHON_FAST_PYCCALL (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1) #endif #if !defined(CYTHON_VECTORCALL) #define CYTHON_VECTORCALL (CYTHON_FAST_PYCCALL && PY_VERSION_HEX >= 0x030800B1) #endif #define CYTHON_BACKPORT_VECTORCALL (CYTHON_METH_FASTCALL && PY_VERSION_HEX < 0x030800B1) #if CYTHON_USE_PYLONG_INTERNALS #if PY_MAJOR_VERSION < 3 #include "longintrepr.h" #endif #undef SHIFT #undef BASE #undef MASK #ifdef SIZEOF_VOID_P enum { __pyx_check_sizeof_voidp = 1 / (int)(SIZEOF_VOID_P == sizeof(void*)) }; #endif #endif #ifndef __has_attribute #define __has_attribute(x) 0 #endif #ifndef __has_cpp_attribute #define __has_cpp_attribute(x) 0 #endif #ifndef CYTHON_RESTRICT #if defined(__GNUC__) #define CYTHON_RESTRICT __restrict__ #elif defined(_MSC_VER) && _MSC_VER >= 1400 #define CYTHON_RESTRICT __restrict #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L #define CYTHON_RESTRICT restrict #else #define CYTHON_RESTRICT #endif #endif #ifndef CYTHON_UNUSED #if defined(__cplusplus) /* for clang __has_cpp_attribute(maybe_unused) is true even before C++17 * but leads to warnings with -pedantic, since it is a C++17 feature */ #if ((defined(_MSVC_LANG) && _MSVC_LANG >= 201703L) || __cplusplus >= 201703L) #if __has_cpp_attribute(maybe_unused) #define CYTHON_UNUSED [[maybe_unused]] #endif #endif #endif #endif #ifndef CYTHON_UNUSED # if defined(__GNUC__) # if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) # define CYTHON_UNUSED __attribute__ ((__unused__)) # else # define CYTHON_UNUSED # endif # elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) # define CYTHON_UNUSED __attribute__ ((__unused__)) # else # define CYTHON_UNUSED # endif #endif #ifndef CYTHON_UNUSED_VAR # if defined(__cplusplus) template<class T> void CYTHON_UNUSED_VAR( const T& ) { } # else # define CYTHON_UNUSED_VAR(x) (void)(x) # endif #endif #ifndef CYTHON_MAYBE_UNUSED_VAR #define CYTHON_MAYBE_UNUSED_VAR(x) CYTHON_UNUSED_VAR(x) #endif #ifndef CYTHON_NCP_UNUSED # if CYTHON_COMPILING_IN_CPYTHON # define CYTHON_NCP_UNUSED # else # define CYTHON_NCP_UNUSED CYTHON_UNUSED # endif #endif #ifndef CYTHON_USE_CPP_STD_MOVE #if defined(__cplusplus) && (\ __cplusplus >= 201103L || (defined(_MSC_VER) && _MSC_VER >= 1600)) #define CYTHON_USE_CPP_STD_MOVE 1 #else #define CYTHON_USE_CPP_STD_MOVE 0 #endif #endif #define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None) #ifdef _MSC_VER #ifndef _MSC_STDINT_H_ #if _MSC_VER < 1300 typedef unsigned char uint8_t; typedef unsigned short uint16_t; typedef unsigned int uint32_t; #else typedef unsigned __int8 uint8_t; typedef unsigned __int16 uint16_t; typedef unsigned __int32 uint32_t; #endif #endif #if _MSC_VER < 1300 #ifdef _WIN64 typedef unsigned long long __pyx_uintptr_t; #else typedef unsigned int __pyx_uintptr_t; #endif #else #ifdef _WIN64 typedef unsigned __int64 __pyx_uintptr_t; #else typedef unsigned __int32 __pyx_uintptr_t; #endif #endif #else #include <stdint.h> typedef uintptr_t __pyx_uintptr_t; #endif #ifndef CYTHON_FALLTHROUGH #if defined(__cplusplus) /* for clang __has_cpp_attribute(fallthrough) is true even before C++17 * but leads to warnings with -pedantic, since it is a C++17 feature */ #if ((defined(_MSVC_LANG) && _MSVC_LANG >= 201703L) || __cplusplus >= 201703L) #if __has_cpp_attribute(fallthrough) #define CYTHON_FALLTHROUGH [[fallthrough]] #endif #endif #ifndef CYTHON_FALLTHROUGH #if __has_cpp_attribute(clang::fallthrough) #define CYTHON_FALLTHROUGH [[clang::fallthrough]] #elif __has_cpp_attribute(gnu::fallthrough) #define CYTHON_FALLTHROUGH [[gnu::fallthrough]] #endif #endif #endif #ifndef CYTHON_FALLTHROUGH #if __has_attribute(fallthrough) #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) #else #define CYTHON_FALLTHROUGH #endif #endif #if defined(__clang__) && defined(__apple_build_version__) #if __apple_build_version__ < 7000000 #undef CYTHON_FALLTHROUGH #define CYTHON_FALLTHROUGH #endif #endif #endif #ifdef __cplusplus template <typename T> struct __PYX_IS_UNSIGNED_IMPL {static const bool value = T(0) < T(-1);}; #define __PYX_IS_UNSIGNED(type) (__PYX_IS_UNSIGNED_IMPL<type>::value) #else #define __PYX_IS_UNSIGNED(type) (((type)-1) > 0) #endif #if CYTHON_COMPILING_IN_PYPY == 1 #define __PYX_NEED_TP_PRINT_SLOT (PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x030A0000) #else #define __PYX_NEED_TP_PRINT_SLOT (PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x03090000) #endif #define __PYX_REINTERPRET_FUNCION(func_pointer, other_pointer) ((func_pointer)(void(*)(void))(other_pointer)) #ifndef CYTHON_INLINE #if defined(__clang__) #define CYTHON_INLINE __inline__ __attribute__ ((__unused__)) #elif defined(__GNUC__) #define CYTHON_INLINE __inline__ #elif defined(_MSC_VER) #define CYTHON_INLINE __inline #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L #define CYTHON_INLINE inline #else #define CYTHON_INLINE #endif #endif #define __PYX_BUILD_PY_SSIZE_T "n" #define CYTHON_FORMAT_SSIZE_T "z" #if PY_MAJOR_VERSION < 3 #define __Pyx_BUILTIN_MODULE_NAME "__builtin__" #define __Pyx_DefaultClassType PyClass_Type #define __Pyx_PyCode_New(a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a+k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #else #define __Pyx_BUILTIN_MODULE_NAME "builtins" #define __Pyx_DefaultClassType PyType_Type #if CYTHON_COMPILING_IN_LIMITED_API static CYTHON_INLINE PyObject* __Pyx_PyCode_New(int a, int p, int k, int l, int s, int f, PyObject *code, PyObject *c, PyObject* n, PyObject *v, PyObject *fv, PyObject *cell, PyObject* fn, PyObject *name, int fline, PyObject *lnos) { PyObject *exception_table = NULL; PyObject *types_module=NULL, *code_type=NULL, *result=NULL; #if __PYX_LIMITED_VERSION_HEX < 0x030B0000 PyObject *version_info; PyObject *py_minor_version = NULL; #endif long minor_version = 0; PyObject *type, *value, *traceback; PyErr_Fetch(&type, &value, &traceback); #if __PYX_LIMITED_VERSION_HEX >= 0x030B0000 minor_version = 11; #else if (!(version_info = PySys_GetObject("version_info"))) goto end; if (!(py_minor_version = PySequence_GetItem(version_info, 1))) goto end; minor_version = PyLong_AsLong(py_minor_version); Py_DECREF(py_minor_version); if (minor_version == -1 && PyErr_Occurred()) goto end; #endif if (!(types_module = PyImport_ImportModule("types"))) goto end; if (!(code_type = PyObject_GetAttrString(types_module, "CodeType"))) goto end; if (minor_version <= 7) { (void)p; result = PyObject_CallFunction(code_type, "iiiiiOOOOOOiOO", a, k, l, s, f, code, c, n, v, fn, name, fline, lnos, fv, cell); } else if (minor_version <= 10) { result = PyObject_CallFunction(code_type, "iiiiiiOOOOOOiOO", a,p, k, l, s, f, code, c, n, v, fn, name, fline, lnos, fv, cell); } else { if (!(exception_table = PyBytes_FromStringAndSize(NULL, 0))) goto end; result = PyObject_CallFunction(code_type, "iiiiiiOOOOOOOiOO", a,p, k, l, s, f, code, c, n, v, fn, name, name, fline, lnos, exception_table, fv, cell); } end: Py_XDECREF(code_type); Py_XDECREF(exception_table); Py_XDECREF(types_module); if (type) { PyErr_Restore(type, value, traceback); } return result; } #ifndef CO_OPTIMIZED #define CO_OPTIMIZED 0x0001 #endif #ifndef CO_NEWLOCALS #define CO_NEWLOCALS 0x0002 #endif #ifndef CO_VARARGS #define CO_VARARGS 0x0004 #endif #ifndef CO_VARKEYWORDS #define CO_VARKEYWORDS 0x0008 #endif #ifndef CO_ASYNC_GENERATOR #define CO_ASYNC_GENERATOR 0x0200 #endif #ifndef CO_GENERATOR #define CO_GENERATOR 0x0020 #endif #ifndef CO_COROUTINE #define CO_COROUTINE 0x0080 #endif #elif PY_VERSION_HEX >= 0x030B0000 static CYTHON_INLINE PyCodeObject* __Pyx_PyCode_New(int a, int p, int k, int l, int s, int f, PyObject *code, PyObject *c, PyObject* n, PyObject *v, PyObject *fv, PyObject *cell, PyObject* fn, PyObject *name, int fline, PyObject *lnos) { PyCodeObject *result; PyObject *empty_bytes = PyBytes_FromStringAndSize("", 0); if (!empty_bytes) return NULL; result = #if PY_VERSION_HEX >= 0x030C0000 PyUnstable_Code_NewWithPosOnlyArgs #else PyCode_NewWithPosOnlyArgs #endif (a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, name, fline, lnos, empty_bytes); Py_DECREF(empty_bytes); return result; } #elif PY_VERSION_HEX >= 0x030800B2 && !CYTHON_COMPILING_IN_PYPY #define __Pyx_PyCode_New(a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_NewWithPosOnlyArgs(a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #else #define __Pyx_PyCode_New(a, p, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #endif #endif #if PY_VERSION_HEX >= 0x030900A4 || defined(Py_IS_TYPE) #define __Pyx_IS_TYPE(ob, type) Py_IS_TYPE(ob, type) #else #define __Pyx_IS_TYPE(ob, type) (((const PyObject*)ob)->ob_type == (type)) #endif #if PY_VERSION_HEX >= 0x030A00B1 || defined(Py_Is) #define __Pyx_Py_Is(x, y) Py_Is(x, y) #else #define __Pyx_Py_Is(x, y) ((x) == (y)) #endif #if PY_VERSION_HEX >= 0x030A00B1 || defined(Py_IsNone) #define __Pyx_Py_IsNone(ob) Py_IsNone(ob) #else #define __Pyx_Py_IsNone(ob) __Pyx_Py_Is((ob), Py_None) #endif #if PY_VERSION_HEX >= 0x030A00B1 || defined(Py_IsTrue) #define __Pyx_Py_IsTrue(ob) Py_IsTrue(ob) #else #define __Pyx_Py_IsTrue(ob) __Pyx_Py_Is((ob), Py_True) #endif #if PY_VERSION_HEX >= 0x030A00B1 || defined(Py_IsFalse) #define __Pyx_Py_IsFalse(ob) Py_IsFalse(ob) #else #define __Pyx_Py_IsFalse(ob) __Pyx_Py_Is((ob), Py_False) #endif #define __Pyx_NoneAsNull(obj) (__Pyx_Py_IsNone(obj) ? NULL : (obj)) #if PY_VERSION_HEX >= 0x030900F0 && !CYTHON_COMPILING_IN_PYPY #define __Pyx_PyObject_GC_IsFinalized(o) PyObject_GC_IsFinalized(o) #else #define __Pyx_PyObject_GC_IsFinalized(o) _PyGC_FINALIZED(o) #endif #ifndef CO_COROUTINE #define CO_COROUTINE 0x80 #endif #ifndef CO_ASYNC_GENERATOR #define CO_ASYNC_GENERATOR 0x200 #endif #ifndef Py_TPFLAGS_CHECKTYPES #define Py_TPFLAGS_CHECKTYPES 0 #endif #ifndef Py_TPFLAGS_HAVE_INDEX #define Py_TPFLAGS_HAVE_INDEX 0 #endif #ifndef Py_TPFLAGS_HAVE_NEWBUFFER #define Py_TPFLAGS_HAVE_NEWBUFFER 0 #endif #ifndef Py_TPFLAGS_HAVE_FINALIZE #define Py_TPFLAGS_HAVE_FINALIZE 0 #endif #ifndef Py_TPFLAGS_SEQUENCE #define Py_TPFLAGS_SEQUENCE 0 #endif #ifndef Py_TPFLAGS_MAPPING #define Py_TPFLAGS_MAPPING 0 #endif #ifndef METH_STACKLESS #define METH_STACKLESS 0 #endif #if PY_VERSION_HEX <= 0x030700A3 || !defined(METH_FASTCALL) #ifndef METH_FASTCALL #define METH_FASTCALL 0x80 #endif typedef PyObject *(*__Pyx_PyCFunctionFast) (PyObject *self, PyObject *const *args, Py_ssize_t nargs); typedef PyObject *(*__Pyx_PyCFunctionFastWithKeywords) (PyObject *self, PyObject *const *args, Py_ssize_t nargs, PyObject *kwnames); #else #if PY_VERSION_HEX >= 0x030d00A4 # define __Pyx_PyCFunctionFast PyCFunctionFast # define __Pyx_PyCFunctionFastWithKeywords PyCFunctionFastWithKeywords #else # define __Pyx_PyCFunctionFast _PyCFunctionFast # define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords #endif #endif #if CYTHON_METH_FASTCALL #define __Pyx_METH_FASTCALL METH_FASTCALL #define __Pyx_PyCFunction_FastCall __Pyx_PyCFunctionFast #define __Pyx_PyCFunction_FastCallWithKeywords __Pyx_PyCFunctionFastWithKeywords #else #define __Pyx_METH_FASTCALL METH_VARARGS #define __Pyx_PyCFunction_FastCall PyCFunction #define __Pyx_PyCFunction_FastCallWithKeywords PyCFunctionWithKeywords #endif #if CYTHON_VECTORCALL #define __pyx_vectorcallfunc vectorcallfunc #define __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET PY_VECTORCALL_ARGUMENTS_OFFSET #define __Pyx_PyVectorcall_NARGS(n) PyVectorcall_NARGS((size_t)(n)) #elif CYTHON_BACKPORT_VECTORCALL typedef PyObject *(*__pyx_vectorcallfunc)(PyObject *callable, PyObject *const *args, size_t nargsf, PyObject *kwnames); #define __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET ((size_t)1 << (8 * sizeof(size_t) - 1)) #define __Pyx_PyVectorcall_NARGS(n) ((Py_ssize_t)(((size_t)(n)) & ~__Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET)) #else #define __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET 0 #define __Pyx_PyVectorcall_NARGS(n) ((Py_ssize_t)(n)) #endif #if PY_MAJOR_VERSION >= 0x030900B1 #define __Pyx_PyCFunction_CheckExact(func) PyCFunction_CheckExact(func) #else #define __Pyx_PyCFunction_CheckExact(func) PyCFunction_Check(func) #endif #define __Pyx_CyOrPyCFunction_Check(func) PyCFunction_Check(func) #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_CyOrPyCFunction_GET_FUNCTION(func) (((PyCFunctionObject*)(func))->m_ml->ml_meth) #elif !CYTHON_COMPILING_IN_LIMITED_API #define __Pyx_CyOrPyCFunction_GET_FUNCTION(func) PyCFunction_GET_FUNCTION(func) #endif #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_CyOrPyCFunction_GET_FLAGS(func) (((PyCFunctionObject*)(func))->m_ml->ml_flags) static CYTHON_INLINE PyObject* __Pyx_CyOrPyCFunction_GET_SELF(PyObject *func) { return (__Pyx_CyOrPyCFunction_GET_FLAGS(func) & METH_STATIC) ? NULL : ((PyCFunctionObject*)func)->m_self; } #endif static CYTHON_INLINE int __Pyx__IsSameCFunction(PyObject *func, void *cfunc) { #if CYTHON_COMPILING_IN_LIMITED_API return PyCFunction_Check(func) && PyCFunction_GetFunction(func) == (PyCFunction) cfunc; #else return PyCFunction_Check(func) && PyCFunction_GET_FUNCTION(func) == (PyCFunction) cfunc; #endif } #define __Pyx_IsSameCFunction(func, cfunc) __Pyx__IsSameCFunction(func, cfunc) #if __PYX_LIMITED_VERSION_HEX < 0x030900B1 #define __Pyx_PyType_FromModuleAndSpec(m, s, b) ((void)m, PyType_FromSpecWithBases(s, b)) typedef PyObject *(*__Pyx_PyCMethod)(PyObject *, PyTypeObject *, PyObject *const *, size_t, PyObject *); #else #define __Pyx_PyType_FromModuleAndSpec(m, s, b) PyType_FromModuleAndSpec(m, s, b) #define __Pyx_PyCMethod PyCMethod #endif #ifndef METH_METHOD #define METH_METHOD 0x200 #endif #if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Malloc) #define PyObject_Malloc(s) PyMem_Malloc(s) #define PyObject_Free(p) PyMem_Free(p) #define PyObject_Realloc(p) PyMem_Realloc(p) #endif #if CYTHON_COMPILING_IN_LIMITED_API #define __Pyx_PyCode_HasFreeVars(co) (PyCode_GetNumFree(co) > 0) #define __Pyx_PyFrame_SetLineNumber(frame, lineno) #else #define __Pyx_PyCode_HasFreeVars(co) (PyCode_GetNumFree(co) > 0) #define __Pyx_PyFrame_SetLineNumber(frame, lineno) (frame)->f_lineno = (lineno) #endif #if CYTHON_COMPILING_IN_LIMITED_API #define __Pyx_PyThreadState_Current PyThreadState_Get() #elif !CYTHON_FAST_THREAD_STATE #define __Pyx_PyThreadState_Current PyThreadState_GET() #elif PY_VERSION_HEX >= 0x030d00A1 #define __Pyx_PyThreadState_Current PyThreadState_GetUnchecked() #elif PY_VERSION_HEX >= 0x03060000 #define __Pyx_PyThreadState_Current _PyThreadState_UncheckedGet() #elif PY_VERSION_HEX >= 0x03000000 #define __Pyx_PyThreadState_Current PyThreadState_GET() #else #define __Pyx_PyThreadState_Current _PyThreadState_Current #endif #if CYTHON_COMPILING_IN_LIMITED_API static CYTHON_INLINE void *__Pyx_PyModule_GetState(PyObject *op) { void *result; result = PyModule_GetState(op); if (!result) Py_FatalError("Couldn't find the module state"); return result; } #endif #define __Pyx_PyObject_GetSlot(obj, name, func_ctype) __Pyx_PyType_GetSlot(Py_TYPE(obj), name, func_ctype) #if CYTHON_COMPILING_IN_LIMITED_API #define __Pyx_PyType_GetSlot(type, name, func_ctype) ((func_ctype) PyType_GetSlot((type), Py_##name)) #else #define __Pyx_PyType_GetSlot(type, name, func_ctype) ((type)->name) #endif #if PY_VERSION_HEX < 0x030700A2 && !defined(PyThread_tss_create) && !defined(Py_tss_NEEDS_INIT) #include "pythread.h" #define Py_tss_NEEDS_INIT 0 typedef int Py_tss_t; static CYTHON_INLINE int PyThread_tss_create(Py_tss_t *key) { *key = PyThread_create_key(); return 0; } static CYTHON_INLINE Py_tss_t * PyThread_tss_alloc(void) { Py_tss_t *key = (Py_tss_t *)PyObject_Malloc(sizeof(Py_tss_t)); *key = Py_tss_NEEDS_INIT; return key; } static CYTHON_INLINE void PyThread_tss_free(Py_tss_t *key) { PyObject_Free(key); } static CYTHON_INLINE int PyThread_tss_is_created(Py_tss_t *key) { return *key != Py_tss_NEEDS_INIT; } static CYTHON_INLINE void PyThread_tss_delete(Py_tss_t *key) { PyThread_delete_key(*key); *key = Py_tss_NEEDS_INIT; } static CYTHON_INLINE int PyThread_tss_set(Py_tss_t *key, void *value) { return PyThread_set_key_value(*key, value); } static CYTHON_INLINE void * PyThread_tss_get(Py_tss_t *key) { return PyThread_get_key_value(*key); } #endif #if PY_MAJOR_VERSION < 3 #if CYTHON_COMPILING_IN_PYPY #if PYPY_VERSION_NUM < 0x07030600 #if defined(__cplusplus) && __cplusplus >= 201402L [[deprecated("`with nogil:` inside a nogil function will not release the GIL in PyPy2 < 7.3.6")]] #elif defined(__GNUC__) || defined(__clang__) __attribute__ ((__deprecated__("`with nogil:` inside a nogil function will not release the GIL in PyPy2 < 7.3.6"))) #elif defined(_MSC_VER) __declspec(deprecated("`with nogil:` inside a nogil function will not release the GIL in PyPy2 < 7.3.6")) #endif static CYTHON_INLINE int PyGILState_Check(void) { return 0; } #else // PYPY_VERSION_NUM < 0x07030600 #endif // PYPY_VERSION_NUM < 0x07030600 #else static CYTHON_INLINE int PyGILState_Check(void) { PyThreadState * tstate = _PyThreadState_Current; return tstate && (tstate == PyGILState_GetThisThreadState()); } #endif #endif #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030d0000 || defined(_PyDict_NewPresized) #define __Pyx_PyDict_NewPresized(n) ((n <= 8) ? PyDict_New() : _PyDict_NewPresized(n)) #else #define __Pyx_PyDict_NewPresized(n) PyDict_New() #endif #if PY_MAJOR_VERSION >= 3 || CYTHON_FUTURE_DIVISION #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) #else #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) #endif #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX > 0x030600B4 && PY_VERSION_HEX < 0x030d0000 && CYTHON_USE_UNICODE_INTERNALS #define __Pyx_PyDict_GetItemStrWithError(dict, name) _PyDict_GetItem_KnownHash(dict, name, ((PyASCIIObject *) name)->hash) static CYTHON_INLINE PyObject * __Pyx_PyDict_GetItemStr(PyObject *dict, PyObject *name) { PyObject *res = __Pyx_PyDict_GetItemStrWithError(dict, name); if (res == NULL) PyErr_Clear(); return res; } #elif PY_MAJOR_VERSION >= 3 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07020000) #define __Pyx_PyDict_GetItemStrWithError PyDict_GetItemWithError #define __Pyx_PyDict_GetItemStr PyDict_GetItem #else static CYTHON_INLINE PyObject * __Pyx_PyDict_GetItemStrWithError(PyObject *dict, PyObject *name) { #if CYTHON_COMPILING_IN_PYPY return PyDict_GetItem(dict, name); #else PyDictEntry *ep; PyDictObject *mp = (PyDictObject*) dict; long hash = ((PyStringObject *) name)->ob_shash; assert(hash != -1); ep = (mp->ma_lookup)(mp, name, hash); if (ep == NULL) { return NULL; } return ep->me_value; #endif } #define __Pyx_PyDict_GetItemStr PyDict_GetItem #endif #if CYTHON_USE_TYPE_SLOTS #define __Pyx_PyType_GetFlags(tp) (((PyTypeObject *)tp)->tp_flags) #define __Pyx_PyType_HasFeature(type, feature) ((__Pyx_PyType_GetFlags(type) & (feature)) != 0) #define __Pyx_PyObject_GetIterNextFunc(obj) (Py_TYPE(obj)->tp_iternext) #else #define __Pyx_PyType_GetFlags(tp) (PyType_GetFlags((PyTypeObject *)tp)) #define __Pyx_PyType_HasFeature(type, feature) PyType_HasFeature(type, feature) #define __Pyx_PyObject_GetIterNextFunc(obj) PyIter_Next #endif #if CYTHON_COMPILING_IN_LIMITED_API #define __Pyx_SetItemOnTypeDict(tp, k, v) PyObject_GenericSetAttr((PyObject*)tp, k, v) #else #define __Pyx_SetItemOnTypeDict(tp, k, v) PyDict_SetItem(tp->tp_dict, k, v) #endif #if CYTHON_USE_TYPE_SPECS && PY_VERSION_HEX >= 0x03080000 #define __Pyx_PyHeapTypeObject_GC_Del(obj) {\ PyTypeObject *type = Py_TYPE((PyObject*)obj);\ assert(__Pyx_PyType_HasFeature(type, Py_TPFLAGS_HEAPTYPE));\ PyObject_GC_Del(obj);\ Py_DECREF(type);\ } #else #define __Pyx_PyHeapTypeObject_GC_Del(obj) PyObject_GC_Del(obj) #endif #if CYTHON_COMPILING_IN_LIMITED_API #define CYTHON_PEP393_ENABLED 1 #define __Pyx_PyUnicode_READY(op) (0) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GetLength(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_ReadChar(u, i) #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) ((void)u, 1114111U) #define __Pyx_PyUnicode_KIND(u) ((void)u, (0)) #define __Pyx_PyUnicode_DATA(u) ((void*)u) #define __Pyx_PyUnicode_READ(k, d, i) ((void)k, PyUnicode_ReadChar((PyObject*)(d), i)) #define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GetLength(u)) #elif PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND) #define CYTHON_PEP393_ENABLED 1 #if PY_VERSION_HEX >= 0x030C0000 #define __Pyx_PyUnicode_READY(op) (0) #else #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ?\ 0 : _PyUnicode_Ready((PyObject *)(op))) #endif #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i) #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) PyUnicode_MAX_CHAR_VALUE(u) #define __Pyx_PyUnicode_KIND(u) ((int)PyUnicode_KIND(u)) #define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u) #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i) #define __Pyx_PyUnicode_WRITE(k, d, i, ch) PyUnicode_WRITE(k, d, i, (Py_UCS4) ch) #if PY_VERSION_HEX >= 0x030C0000 #define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_LENGTH(u)) #else #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x03090000 #define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : ((PyCompactUnicodeObject *)(u))->wstr_length)) #else #define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : PyUnicode_GET_SIZE(u))) #endif #endif #else #define CYTHON_PEP393_ENABLED 0 #define PyUnicode_1BYTE_KIND 1 #define PyUnicode_2BYTE_KIND 2 #define PyUnicode_4BYTE_KIND 4 #define __Pyx_PyUnicode_READY(op) (0) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i])) #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) ((sizeof(Py_UNICODE) == 2) ? 65535U : 1114111U) #define __Pyx_PyUnicode_KIND(u) ((int)sizeof(Py_UNICODE)) #define __Pyx_PyUnicode_DATA(u) ((void*)PyUnicode_AS_UNICODE(u)) #define __Pyx_PyUnicode_READ(k, d, i) ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i])) #define __Pyx_PyUnicode_WRITE(k, d, i, ch) (((void)(k)), ((Py_UNICODE*)d)[i] = (Py_UNICODE) ch) #define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_SIZE(u)) #endif #if CYTHON_COMPILING_IN_PYPY #define __Pyx_PyUnicode_Concat(a, b) PyNumber_Add(a, b) #define __Pyx_PyUnicode_ConcatSafe(a, b) PyNumber_Add(a, b) #else #define __Pyx_PyUnicode_Concat(a, b) PyUnicode_Concat(a, b) #define __Pyx_PyUnicode_ConcatSafe(a, b) ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ?\ PyNumber_Add(a, b) : __Pyx_PyUnicode_Concat(a, b)) #endif #if CYTHON_COMPILING_IN_PYPY #if !defined(PyUnicode_DecodeUnicodeEscape) #define PyUnicode_DecodeUnicodeEscape(s, size, errors) PyUnicode_Decode(s, size, "unicode_escape", errors) #endif #if !defined(PyUnicode_Contains) || (PY_MAJOR_VERSION == 2 && PYPY_VERSION_NUM < 0x07030500) #undef PyUnicode_Contains #define PyUnicode_Contains(u, s) PySequence_Contains(u, s) #endif #if !defined(PyByteArray_Check) #define PyByteArray_Check(obj) PyObject_TypeCheck(obj, &PyByteArray_Type) #endif #if !defined(PyObject_Format) #define PyObject_Format(obj, fmt) PyObject_CallMethod(obj, "__format__", "O", fmt) #endif #endif #define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyString_Check(b) && !PyString_CheckExact(b)))) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) #define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyUnicode_Check(b) && !PyUnicode_CheckExact(b)))) ? 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Use 'CYTHON_EXTERN_C' instead.") #else #warning Please do not define the '__PYX_EXTERN_C' macro externally. Use 'CYTHON_EXTERN_C' instead. #endif #else #ifdef __cplusplus #define __PYX_EXTERN_C extern "C" #else #define __PYX_EXTERN_C extern #endif #endif #define __PYX_HAVE__pysam__libctabix #define __PYX_HAVE_API__pysam__libctabix /* Early includes */ #include <stdint.h> #include <string.h> #include <stdlib.h> #include <stdio.h> #include "fcntl.h" #include "unistd.h" #include <sys/types.h> #include "stdarg.h" #include "htslib/kstring.h" #include "htslib_util.h" #include "htslib/hfile.h" #include "htslib/bgzf.h" #include "htslib/hts.h" #include "htslib/sam.h" #include "htslib/faidx.h" #include "htslib/tbx.h" #include "htslib/vcf.h" #include "htslib/vcfutils.h" #include "htslib/cram.h" #include "pysam_stream.h" #include <errno.h> #include <unistd.h> #include <stddef.h> #include "pythread.h" #if CYTHON_COMPILING_IN_PYPY #ifdef _MSC_VER #pragma message ("This module uses CPython specific internals of 'array.array', which are not available in PyPy.") #else #warning This module uses CPython specific internals of 'array.array', which are not available in PyPy. #endif #endif #ifdef _OPENMP #include <omp.h> #endif /* _OPENMP */ #if defined(PYREX_WITHOUT_ASSERTIONS) && !defined(CYTHON_WITHOUT_ASSERTIONS) #define CYTHON_WITHOUT_ASSERTIONS #endif typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; #define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0 #define __PYX_DEFAULT_STRING_ENCODING_IS_UTF8 0 #define __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT (PY_MAJOR_VERSION >= 3 && __PYX_DEFAULT_STRING_ENCODING_IS_UTF8) #define __PYX_DEFAULT_STRING_ENCODING "" #define __Pyx_PyObject_FromString __Pyx_PyBytes_FromString #define __Pyx_PyObject_FromStringAndSize __Pyx_PyBytes_FromStringAndSize #define __Pyx_uchar_cast(c) ((unsigned char)c) #define __Pyx_long_cast(x) ((long)x) #define __Pyx_fits_Py_ssize_t(v, type, is_signed) (\ (sizeof(type) < sizeof(Py_ssize_t)) ||\ (sizeof(type) > sizeof(Py_ssize_t) &&\ likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX) &&\ (!is_signed || likely(v > (type)PY_SSIZE_T_MIN ||\ v == (type)PY_SSIZE_T_MIN))) ||\ (sizeof(type) == sizeof(Py_ssize_t) &&\ (is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX))) ) static CYTHON_INLINE int __Pyx_is_valid_index(Py_ssize_t i, Py_ssize_t limit) { return (size_t) i < (size_t) limit; } #if defined (__cplusplus) && __cplusplus >= 201103L #include <cstdlib> #define __Pyx_sst_abs(value) std::abs(value) #elif SIZEOF_INT >= SIZEOF_SIZE_T #define __Pyx_sst_abs(value) abs(value) #elif SIZEOF_LONG >= SIZEOF_SIZE_T #define __Pyx_sst_abs(value) labs(value) #elif defined (_MSC_VER) #define __Pyx_sst_abs(value) ((Py_ssize_t)_abs64(value)) #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L #define __Pyx_sst_abs(value) llabs(value) #elif defined (__GNUC__) #define __Pyx_sst_abs(value) __builtin_llabs(value) #else #define __Pyx_sst_abs(value) ((value<0) ? -value : value) #endif static CYTHON_INLINE Py_ssize_t __Pyx_ssize_strlen(const char *s); static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject*); static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); static CYTHON_INLINE PyObject* __Pyx_PyByteArray_FromString(const char*); #define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l) #define __Pyx_PyBytes_FromString PyBytes_FromString #define __Pyx_PyBytes_FromStringAndSize PyBytes_FromStringAndSize static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*); #if PY_MAJOR_VERSION < 3 #define __Pyx_PyStr_FromString __Pyx_PyBytes_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyBytes_FromStringAndSize #else #define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize #endif #define __Pyx_PyBytes_AsWritableString(s) ((char*) PyBytes_AS_STRING(s)) #define __Pyx_PyBytes_AsWritableSString(s) ((signed char*) PyBytes_AS_STRING(s)) #define __Pyx_PyBytes_AsWritableUString(s) ((unsigned char*) PyBytes_AS_STRING(s)) #define __Pyx_PyBytes_AsString(s) ((const char*) PyBytes_AS_STRING(s)) #define __Pyx_PyBytes_AsSString(s) ((const signed char*) PyBytes_AS_STRING(s)) #define __Pyx_PyBytes_AsUString(s) ((const unsigned char*) PyBytes_AS_STRING(s)) #define __Pyx_PyObject_AsWritableString(s) ((char*)(__pyx_uintptr_t) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_AsWritableSString(s) ((signed char*)(__pyx_uintptr_t) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_AsWritableUString(s) ((unsigned char*)(__pyx_uintptr_t) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_AsSString(s) ((const signed char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_AsUString(s) ((const unsigned char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s) #define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s) #define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s) #define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s) #define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s) #define __Pyx_PyUnicode_FromOrdinal(o) PyUnicode_FromOrdinal((int)o) #define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) #define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None) static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b); static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*); static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject*); static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x); #define __Pyx_PySequence_Tuple(obj)\ (likely(PyTuple_CheckExact(obj)) ? __Pyx_NewRef(obj) : PySequence_Tuple(obj)) static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*); static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t); static CYTHON_INLINE Py_hash_t __Pyx_PyIndex_AsHash_t(PyObject*); #if CYTHON_ASSUME_SAFE_MACROS #define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x)) #else #define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x) #endif #define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x)) #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x)) #else #define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x)) #endif #if CYTHON_USE_PYLONG_INTERNALS #if PY_VERSION_HEX >= 0x030C00A7 #ifndef _PyLong_SIGN_MASK #define _PyLong_SIGN_MASK 3 #endif #ifndef _PyLong_NON_SIZE_BITS #define _PyLong_NON_SIZE_BITS 3 #endif #define __Pyx_PyLong_Sign(x) (((PyLongObject*)x)->long_value.lv_tag & _PyLong_SIGN_MASK) #define __Pyx_PyLong_IsNeg(x) ((__Pyx_PyLong_Sign(x) & 2) != 0) #define __Pyx_PyLong_IsNonNeg(x) (!__Pyx_PyLong_IsNeg(x)) #define __Pyx_PyLong_IsZero(x) (__Pyx_PyLong_Sign(x) & 1) #define __Pyx_PyLong_IsPos(x) (__Pyx_PyLong_Sign(x) == 0) #define __Pyx_PyLong_CompactValueUnsigned(x) (__Pyx_PyLong_Digits(x)[0]) #define __Pyx_PyLong_DigitCount(x) ((Py_ssize_t) (((PyLongObject*)x)->long_value.lv_tag >> _PyLong_NON_SIZE_BITS)) #define __Pyx_PyLong_SignedDigitCount(x)\ ((1 - (Py_ssize_t) __Pyx_PyLong_Sign(x)) * __Pyx_PyLong_DigitCount(x)) #if defined(PyUnstable_Long_IsCompact) && defined(PyUnstable_Long_CompactValue) #define __Pyx_PyLong_IsCompact(x) PyUnstable_Long_IsCompact((PyLongObject*) x) #define __Pyx_PyLong_CompactValue(x) PyUnstable_Long_CompactValue((PyLongObject*) x) #else #define __Pyx_PyLong_IsCompact(x) (((PyLongObject*)x)->long_value.lv_tag < (2 << _PyLong_NON_SIZE_BITS)) #define __Pyx_PyLong_CompactValue(x) ((1 - (Py_ssize_t) __Pyx_PyLong_Sign(x)) * (Py_ssize_t) __Pyx_PyLong_Digits(x)[0]) #endif typedef Py_ssize_t __Pyx_compact_pylong; typedef size_t __Pyx_compact_upylong; #else #define __Pyx_PyLong_IsNeg(x) (Py_SIZE(x) < 0) #define __Pyx_PyLong_IsNonNeg(x) (Py_SIZE(x) >= 0) #define __Pyx_PyLong_IsZero(x) (Py_SIZE(x) == 0) #define __Pyx_PyLong_IsPos(x) (Py_SIZE(x) > 0) #define __Pyx_PyLong_CompactValueUnsigned(x) ((Py_SIZE(x) == 0) ? 0 : __Pyx_PyLong_Digits(x)[0]) #define __Pyx_PyLong_DigitCount(x) __Pyx_sst_abs(Py_SIZE(x)) #define __Pyx_PyLong_SignedDigitCount(x) Py_SIZE(x) #define __Pyx_PyLong_IsCompact(x) (Py_SIZE(x) == 0 || Py_SIZE(x) == 1 || Py_SIZE(x) == -1) #define __Pyx_PyLong_CompactValue(x)\ ((Py_SIZE(x) == 0) ? (sdigit) 0 : ((Py_SIZE(x) < 0) ? -(sdigit)__Pyx_PyLong_Digits(x)[0] : (sdigit)__Pyx_PyLong_Digits(x)[0])) typedef sdigit __Pyx_compact_pylong; typedef digit __Pyx_compact_upylong; #endif #if PY_VERSION_HEX >= 0x030C00A5 #define __Pyx_PyLong_Digits(x) (((PyLongObject*)x)->long_value.ob_digit) #else #define __Pyx_PyLong_Digits(x) (((PyLongObject*)x)->ob_digit) #endif #endif #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII #include <string.h> static int __Pyx_sys_getdefaultencoding_not_ascii; static int __Pyx_init_sys_getdefaultencoding_params(void) { PyObject* sys; PyObject* default_encoding = NULL; PyObject* ascii_chars_u = NULL; PyObject* ascii_chars_b = NULL; const char* default_encoding_c; sys = PyImport_ImportModule("sys"); if (!sys) goto bad; default_encoding = PyObject_CallMethod(sys, (char*) "getdefaultencoding", NULL); Py_DECREF(sys); if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; if (strcmp(default_encoding_c, "ascii") == 0) { __Pyx_sys_getdefaultencoding_not_ascii = 0; } else { char ascii_chars[128]; int c; for (c = 0; c < 128; c++) { ascii_chars[c] = (char) c; } __Pyx_sys_getdefaultencoding_not_ascii = 1; ascii_chars_u = PyUnicode_DecodeASCII(ascii_chars, 128, NULL); if (!ascii_chars_u) goto bad; ascii_chars_b = PyUnicode_AsEncodedString(ascii_chars_u, default_encoding_c, NULL); if (!ascii_chars_b || !PyBytes_Check(ascii_chars_b) || memcmp(ascii_chars, PyBytes_AS_STRING(ascii_chars_b), 128) != 0) { PyErr_Format( PyExc_ValueError, "This module compiled with c_string_encoding=ascii, but default encoding '%.200s' is not a superset of ascii.", default_encoding_c); goto bad; } Py_DECREF(ascii_chars_u); Py_DECREF(ascii_chars_b); } Py_DECREF(default_encoding); return 0; bad: Py_XDECREF(default_encoding); Py_XDECREF(ascii_chars_u); Py_XDECREF(ascii_chars_b); return -1; } #endif #if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT && PY_MAJOR_VERSION >= 3 #define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_DecodeUTF8(c_str, size, NULL) #else #define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_Decode(c_str, size, __PYX_DEFAULT_STRING_ENCODING, NULL) #if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT #include <string.h> static char* __PYX_DEFAULT_STRING_ENCODING; static int __Pyx_init_sys_getdefaultencoding_params(void) { PyObject* sys; PyObject* default_encoding = NULL; char* default_encoding_c; sys = PyImport_ImportModule("sys"); if (!sys) goto bad; default_encoding = PyObject_CallMethod(sys, (char*) (const char*) "getdefaultencoding", NULL); Py_DECREF(sys); if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c) + 1); if (!__PYX_DEFAULT_STRING_ENCODING) goto bad; strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c); Py_DECREF(default_encoding); return 0; bad: Py_XDECREF(default_encoding); return -1; } #endif #endif /* Test for GCC > 2.95 */ #if defined(__GNUC__) && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95))) #define likely(x) __builtin_expect(!!(x), 1) #define unlikely(x) __builtin_expect(!!(x), 0) #else /* !__GNUC__ or GCC < 2.95 */ #define likely(x) (x) #define unlikely(x) (x) #endif /* __GNUC__ */ static CYTHON_INLINE void __Pyx_pretend_to_initialize(void* ptr) { (void)ptr; } #if !CYTHON_USE_MODULE_STATE static PyObject *__pyx_m = NULL; #endif static int __pyx_lineno; static int __pyx_clineno = 0; static const char * __pyx_cfilenm = __FILE__; static const char *__pyx_filename; /* #### Code section: filename_table ### */ static const char *__pyx_f[] = { "pysam/libctabix.pyx", "<stringsource>", "contextvars.pxd", "array.pxd", "pysam/libctabix.pxd", "type.pxd", "bool.pxd", "complex.pxd", "pysam/libctabixproxies.pxd", }; /* #### Code section: utility_code_proto_before_types ### */ /* ForceInitThreads.proto */ #ifndef __PYX_FORCE_INIT_THREADS #define __PYX_FORCE_INIT_THREADS 0 #endif /* NoFastGil.proto */ #define __Pyx_PyGILState_Ensure PyGILState_Ensure #define __Pyx_PyGILState_Release PyGILState_Release #define __Pyx_FastGIL_Remember() #define __Pyx_FastGIL_Forget() #define __Pyx_FastGilFuncInit() /* #### Code section: numeric_typedefs ### */ /* #### Code section: complex_type_declarations ### */ /* #### Code section: type_declarations ### */ /*--- Type declarations ---*/ #ifndef _ARRAYARRAY_H struct arrayobject; typedef struct arrayobject arrayobject; #endif struct __pyx_obj_5pysam_10libchtslib_HTSFile; struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy; struct __pyx_obj_5pysam_16libctabixproxies_TupleProxyIterator; struct __pyx_obj_5pysam_16libctabixproxies_NamedTupleProxy; struct __pyx_obj_5pysam_16libctabixproxies_GTFProxy; struct __pyx_obj_5pysam_16libctabixproxies_GFF3Proxy; struct __pyx_obj_5pysam_16libctabixproxies_BedProxy; struct __pyx_obj_5pysam_16libctabixproxies_VCFProxy; struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator; struct __pyx_obj_5pysam_9libctabix_TabixFile; struct __pyx_obj_5pysam_9libctabix_Parser; struct __pyx_obj_5pysam_9libctabix_asTuple; struct __pyx_obj_5pysam_9libctabix_asGTF; struct __pyx_obj_5pysam_9libctabix_asGFF3; struct __pyx_obj_5pysam_9libctabix_asBed; struct __pyx_obj_5pysam_9libctabix_asVCF; struct __pyx_obj_5pysam_9libctabix_TabixIterator; struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed; struct __pyx_obj_5pysam_9libctabix_GZIterator; struct __pyx_obj_5pysam_9libctabix_GZIteratorHead; struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed; struct __pyx_obj_5pysam_9libctabix_Tabixfile; struct __pyx_opt_args_7cpython_11contextvars_get_value; struct __pyx_opt_args_7cpython_11contextvars_get_value_no_default; /* "cpython/contextvars.pxd":112 * * * cdef inline object get_value(var, default_value=None): # <<<<<<<<<<<<<< * """Return a new reference to the value of the context variable, * or the default value of the context variable, */ struct __pyx_opt_args_7cpython_11contextvars_get_value { int __pyx_n; PyObject *default_value; }; /* "cpython/contextvars.pxd":129 * * * cdef inline object get_value_no_default(var, default_value=None): # <<<<<<<<<<<<<< * """Return a new reference to the value of the context variable, * or the provided default value if no such value was found. */ struct __pyx_opt_args_7cpython_11contextvars_get_value_no_default { int __pyx_n; PyObject *default_value; }; struct __pyx_opt_args_5pysam_16libctabixproxies_10TupleProxy_copy; /* "pysam/libctabixproxies.pxd":23 * cdef take(self, char * buffer, size_t nbytes) * cdef present(self, char * buffer, size_t nbytes) * cdef copy(self, char * buffer, size_t nbytes, bint reset=*) # <<<<<<<<<<<<<< * cdef update(self, char * buffer, size_t nbytes) * */ struct __pyx_opt_args_5pysam_16libctabixproxies_10TupleProxy_copy { int __pyx_n; int reset; }; struct __pyx_opt_args_5pysam_9libcutils_parse_region; struct __pyx_opt_args_5pysam_9libcutils_qualitystring_to_array; struct __pyx_opt_args_5pysam_9libcutils_array_to_qualitystring; struct __pyx_opt_args_5pysam_9libcutils_qualities_to_qualitystring; struct __pyx_opt_args_5pysam_9libcutils_charptr_to_str; struct __pyx_opt_args_5pysam_9libcutils_charptr_to_bytes; struct __pyx_opt_args_5pysam_9libcutils_charptr_to_str_w_len; struct __pyx_opt_args_5pysam_9libcutils_force_str; struct __pyx_opt_args_5pysam_9libcutils_force_bytes; struct __pyx_opt_args_5pysam_9libcutils_decode_bytes; /* "pysam/libcutils.pxd":8 * from cpython cimport array as c_array * * cpdef parse_region(contig=*, start=*, stop=*, region=*, reference=*, end=*) # <<<<<<<<<<<<<< * * cdef int libc_whence_from_io(int whence) */ struct __pyx_opt_args_5pysam_9libcutils_parse_region { int __pyx_n; PyObject *contig; PyObject *start; PyObject *stop; PyObject *region; PyObject *reference; PyObject *end; }; /* "pysam/libcutils.pxd":15 * # Utility functions for quality string conversions * * cpdef c_array.array qualitystring_to_array(input_str, int offset=*) # <<<<<<<<<<<<<< * cpdef array_to_qualitystring(c_array.array arr, int offset=*) * cpdef qualities_to_qualitystring(qualities, int offset=*) */ struct __pyx_opt_args_5pysam_9libcutils_qualitystring_to_array { int __pyx_n; int offset; }; /* "pysam/libcutils.pxd":16 * * cpdef c_array.array qualitystring_to_array(input_str, int offset=*) * cpdef array_to_qualitystring(c_array.array arr, int offset=*) # <<<<<<<<<<<<<< * cpdef qualities_to_qualitystring(qualities, int offset=*) * */ struct __pyx_opt_args_5pysam_9libcutils_array_to_qualitystring { int __pyx_n; int offset; }; /* "pysam/libcutils.pxd":17 * cpdef c_array.array qualitystring_to_array(input_str, int offset=*) * cpdef array_to_qualitystring(c_array.array arr, int offset=*) * cpdef qualities_to_qualitystring(qualities, int offset=*) # <<<<<<<<<<<<<< * * ######################################################################## */ struct __pyx_opt_args_5pysam_9libcutils_qualities_to_qualitystring { int __pyx_n; int offset; }; /* "pysam/libcutils.pxd":29 * ## Python 3 compatibility functions * ######################################################################## * cdef charptr_to_str(const char *s, encoding=*, errors=*) # <<<<<<<<<<<<<< * cdef bytes charptr_to_bytes(const char *s, encoding=*, errors=*) * cdef charptr_to_str_w_len(const char* s, size_t n, encoding=*, errors=*) */ struct __pyx_opt_args_5pysam_9libcutils_charptr_to_str { int __pyx_n; PyObject *encoding; PyObject *errors; }; /* "pysam/libcutils.pxd":30 * ######################################################################## * cdef charptr_to_str(const char *s, encoding=*, errors=*) * cdef bytes charptr_to_bytes(const char *s, encoding=*, errors=*) # <<<<<<<<<<<<<< * cdef charptr_to_str_w_len(const char* s, size_t n, encoding=*, errors=*) * cdef force_str(object s, encoding=*, errors=*) */ struct __pyx_opt_args_5pysam_9libcutils_charptr_to_bytes { int __pyx_n; PyObject *encoding; PyObject *errors; }; /* "pysam/libcutils.pxd":31 * cdef charptr_to_str(const char *s, encoding=*, errors=*) * cdef bytes charptr_to_bytes(const char *s, encoding=*, errors=*) * cdef charptr_to_str_w_len(const char* s, size_t n, encoding=*, errors=*) # <<<<<<<<<<<<<< * cdef force_str(object s, encoding=*, errors=*) * cdef bytes force_bytes(object s, encoding=*, errors=*) */ struct __pyx_opt_args_5pysam_9libcutils_charptr_to_str_w_len { int __pyx_n; PyObject *encoding; PyObject *errors; }; /* "pysam/libcutils.pxd":32 * cdef bytes charptr_to_bytes(const char *s, encoding=*, errors=*) * cdef charptr_to_str_w_len(const char* s, size_t n, encoding=*, errors=*) * cdef force_str(object s, encoding=*, errors=*) # <<<<<<<<<<<<<< * cdef bytes force_bytes(object s, encoding=*, errors=*) * cdef decode_bytes(bytes s, encoding=*, errors=*) */ struct __pyx_opt_args_5pysam_9libcutils_force_str { int __pyx_n; PyObject *encoding; PyObject *errors; }; /* "pysam/libcutils.pxd":33 * cdef charptr_to_str_w_len(const char* s, size_t n, encoding=*, errors=*) * cdef force_str(object s, encoding=*, errors=*) * cdef bytes force_bytes(object s, encoding=*, errors=*) # <<<<<<<<<<<<<< * cdef decode_bytes(bytes s, encoding=*, errors=*) * cdef bytes encode_filename(object filename) */ struct __pyx_opt_args_5pysam_9libcutils_force_bytes { int __pyx_n; PyObject *encoding; PyObject *errors; }; /* "pysam/libcutils.pxd":34 * cdef force_str(object s, encoding=*, errors=*) * cdef bytes force_bytes(object s, encoding=*, errors=*) * cdef decode_bytes(bytes s, encoding=*, errors=*) # <<<<<<<<<<<<<< * cdef bytes encode_filename(object filename) * cdef from_string_and_size(const char *s, size_t length) */ struct __pyx_opt_args_5pysam_9libcutils_decode_bytes { int __pyx_n; PyObject *encoding; PyObject *errors; }; /* "pysam/libchtslib.pxd":2706 * * * cdef class HTSFile(object): # <<<<<<<<<<<<<< * cdef htsFile *htsfile # pointer to htsFile structure * cdef int64_t start_offset # BGZF offset of first record */ struct __pyx_obj_5pysam_10libchtslib_HTSFile { PyObject_HEAD struct __pyx_vtabstruct_5pysam_10libchtslib_HTSFile *__pyx_vtab; htsFile *htsfile; int64_t start_offset; PyObject *filename; PyObject *mode; PyObject *threads; PyObject *index_filename; int is_stream; int is_remote; int duplicate_filehandle; }; /* "pysam/libctabixproxies.pxd":5 * from libc.stdint cimport uint8_t, int32_t, uint32_t, int64_t, uint64_t * * cdef class TupleProxy: # <<<<<<<<<<<<<< * * cdef: */ struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy { PyObject_HEAD struct __pyx_vtabstruct_5pysam_16libctabixproxies_TupleProxy *__pyx_vtab; char *data; char **fields; int nfields; int nbytes; int offset; int is_modified; PyObject *encoding; }; /* "pysam/libctabixproxies.pxd":27 * * * cdef class TupleProxyIterator: # <<<<<<<<<<<<<< * cdef TupleProxy proxy * cdef int index */ struct __pyx_obj_5pysam_16libctabixproxies_TupleProxyIterator { PyObject_HEAD struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy *proxy; int index; }; /* "pysam/libctabixproxies.pxd":32 * * * cdef class NamedTupleProxy(TupleProxy): # <<<<<<<<<<<<<< * pass * */ struct __pyx_obj_5pysam_16libctabixproxies_NamedTupleProxy { struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy __pyx_base; }; /* "pysam/libctabixproxies.pxd":36 * * * cdef class GTFProxy(NamedTupleProxy): # <<<<<<<<<<<<<< * cdef object attribute_dict * cpdef int getMaxFields(self) */ struct __pyx_obj_5pysam_16libctabixproxies_GTFProxy { struct __pyx_obj_5pysam_16libctabixproxies_NamedTupleProxy __pyx_base; PyObject *attribute_dict; }; /* "pysam/libctabixproxies.pxd":42 * * * cdef class GFF3Proxy(GTFProxy): # <<<<<<<<<<<<<< * pass * */ struct __pyx_obj_5pysam_16libctabixproxies_GFF3Proxy { struct __pyx_obj_5pysam_16libctabixproxies_GTFProxy __pyx_base; }; /* "pysam/libctabixproxies.pxd":46 * * * cdef class BedProxy(NamedTupleProxy): # <<<<<<<<<<<<<< * * cdef: */ struct __pyx_obj_5pysam_16libctabixproxies_BedProxy { struct __pyx_obj_5pysam_16libctabixproxies_NamedTupleProxy __pyx_base; char *contig; uint32_t start; uint32_t end; int bedfields; }; /* "pysam/libctabixproxies.pxd":58 * cdef update(self, char * buffer, size_t nbytes) * * cdef class VCFProxy(NamedTupleProxy) : # <<<<<<<<<<<<<< * * cdef: */ struct __pyx_obj_5pysam_16libctabixproxies_VCFProxy { struct __pyx_obj_5pysam_16libctabixproxies_NamedTupleProxy __pyx_base; char *contig; uint32_t pos; }; /* "pysam/libctabix.pxd":48 * * * cdef class tabix_file_iterator: # <<<<<<<<<<<<<< * cdef BGZF * fh * cdef kstream_t * kstream */ struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator { PyObject_HEAD struct __pyx_vtabstruct_5pysam_9libctabix_tabix_file_iterator *__pyx_vtab; BGZF *fh; kstream_t *kstream; kstring_t buffer; size_t size; struct __pyx_obj_5pysam_9libctabix_Parser *parser; int fd; int duplicated_fd; PyObject *infile; }; /* "pysam/libctabix.pxd":61 * * * cdef class TabixFile(HTSFile): # <<<<<<<<<<<<<< * # pointer to index structure * cdef tbx_t * index */ struct __pyx_obj_5pysam_9libctabix_TabixFile { struct __pyx_obj_5pysam_10libchtslib_HTSFile __pyx_base; tbx_t *index; PyObject *filename_index; struct __pyx_obj_5pysam_9libctabix_Parser *parser; PyObject *encoding; }; /* "pysam/libctabix.pxd":72 * * * cdef class Parser: # <<<<<<<<<<<<<< * cdef encoding * cdef parse(self, char * buffer, int len) */ struct __pyx_obj_5pysam_9libctabix_Parser { PyObject_HEAD struct __pyx_vtabstruct_5pysam_9libctabix_Parser *__pyx_vtab; PyObject *encoding; }; /* "pysam/libctabix.pxd":77 * * * cdef class asTuple(Parser): # <<<<<<<<<<<<<< * cdef parse(self, char * buffer, int len) * */ struct __pyx_obj_5pysam_9libctabix_asTuple { struct __pyx_obj_5pysam_9libctabix_Parser __pyx_base; }; /* "pysam/libctabix.pxd":81 * * * cdef class asGTF(Parser): # <<<<<<<<<<<<<< * pass * */ struct __pyx_obj_5pysam_9libctabix_asGTF { struct __pyx_obj_5pysam_9libctabix_Parser __pyx_base; }; /* "pysam/libctabix.pxd":85 * * * cdef class asGFF3(Parser): # <<<<<<<<<<<<<< * pass * */ struct __pyx_obj_5pysam_9libctabix_asGFF3 { struct __pyx_obj_5pysam_9libctabix_Parser __pyx_base; }; /* "pysam/libctabix.pxd":89 * * * cdef class asBed(Parser): # <<<<<<<<<<<<<< * pass * */ struct __pyx_obj_5pysam_9libctabix_asBed { struct __pyx_obj_5pysam_9libctabix_Parser __pyx_base; }; /* "pysam/libctabix.pxd":93 * * * cdef class asVCF(Parser): # <<<<<<<<<<<<<< * pass * */ struct __pyx_obj_5pysam_9libctabix_asVCF { struct __pyx_obj_5pysam_9libctabix_Parser __pyx_base; }; /* "pysam/libctabix.pxd":97 * * * cdef class TabixIterator: # <<<<<<<<<<<<<< * cdef hts_itr_t * iterator * cdef TabixFile tabixfile */ struct __pyx_obj_5pysam_9libctabix_TabixIterator { PyObject_HEAD struct __pyx_vtabstruct_5pysam_9libctabix_TabixIterator *__pyx_vtab; hts_itr_t *iterator; struct __pyx_obj_5pysam_9libctabix_TabixFile *tabixfile; kstring_t buffer; PyObject *encoding; }; /* "pysam/libctabix.pxd":105 * * * cdef class TabixIteratorParsed(TabixIterator): # <<<<<<<<<<<<<< * cdef Parser parser * */ struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed { struct __pyx_obj_5pysam_9libctabix_TabixIterator __pyx_base; struct __pyx_obj_5pysam_9libctabix_Parser *parser; }; /* "pysam/libctabix.pxd":109 * * * cdef class GZIterator: # <<<<<<<<<<<<<< * cdef object _filename * cdef BGZF * gzipfile */ struct __pyx_obj_5pysam_9libctabix_GZIterator { PyObject_HEAD struct __pyx_vtabstruct_5pysam_9libctabix_GZIterator *__pyx_vtab; PyObject *_filename; BGZF *gzipfile; kstream_t *kstream; kstring_t buffer; PyObject *encoding; }; /* "pysam/libctabix.pxd":118 * * * cdef class GZIteratorHead(GZIterator): # <<<<<<<<<<<<<< * pass * */ struct __pyx_obj_5pysam_9libctabix_GZIteratorHead { struct __pyx_obj_5pysam_9libctabix_GZIterator __pyx_base; }; /* "pysam/libctabix.pxd":122 * * * cdef class GZIteratorParsed(GZIterator): # <<<<<<<<<<<<<< * cdef Parser parser * */ struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed { struct __pyx_obj_5pysam_9libctabix_GZIterator __pyx_base; struct __pyx_obj_5pysam_9libctabix_Parser *parser; }; /* "pysam/libctabix.pxd":127 * * # Compatibility Layer for pysam < 0.8 * cdef class Tabixfile(TabixFile): # <<<<<<<<<<<<<< * pass */ struct __pyx_obj_5pysam_9libctabix_Tabixfile { struct __pyx_obj_5pysam_9libctabix_TabixFile __pyx_base; }; /* "pysam/libchtslib.pxd":2706 * * * cdef class HTSFile(object): # <<<<<<<<<<<<<< * cdef htsFile *htsfile # pointer to htsFile structure * cdef int64_t start_offset # BGZF offset of first record */ struct __pyx_vtabstruct_5pysam_10libchtslib_HTSFile { htsFile *(*_open_htsfile)(struct __pyx_obj_5pysam_10libchtslib_HTSFile *); }; static struct __pyx_vtabstruct_5pysam_10libchtslib_HTSFile *__pyx_vtabptr_5pysam_10libchtslib_HTSFile; /* "pysam/libctabixproxies.pxd":5 * from libc.stdint cimport uint8_t, int32_t, uint32_t, int64_t, uint64_t * * cdef class TupleProxy: # <<<<<<<<<<<<<< * * cdef: */ struct __pyx_vtabstruct_5pysam_16libctabixproxies_TupleProxy { int (*getMaxFields)(struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy *, int __pyx_skip_dispatch); int (*getMinFields)(struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy *, int __pyx_skip_dispatch); PyObject *(*take)(struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy *, char *, size_t); PyObject *(*present)(struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy *, char *, size_t); PyObject *(*copy)(struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy *, char *, size_t, struct __pyx_opt_args_5pysam_16libctabixproxies_10TupleProxy_copy *__pyx_optional_args); PyObject *(*update)(struct __pyx_obj_5pysam_16libctabixproxies_TupleProxy *, char *, size_t); }; static struct __pyx_vtabstruct_5pysam_16libctabixproxies_TupleProxy *__pyx_vtabptr_5pysam_16libctabixproxies_TupleProxy; /* "pysam/libctabixproxies.pxd":32 * * * cdef class NamedTupleProxy(TupleProxy): # <<<<<<<<<<<<<< * pass * */ struct __pyx_vtabstruct_5pysam_16libctabixproxies_NamedTupleProxy { struct __pyx_vtabstruct_5pysam_16libctabixproxies_TupleProxy __pyx_base; }; static struct __pyx_vtabstruct_5pysam_16libctabixproxies_NamedTupleProxy *__pyx_vtabptr_5pysam_16libctabixproxies_NamedTupleProxy; /* "pysam/libctabixproxies.pxd":36 * * * cdef class GTFProxy(NamedTupleProxy): # <<<<<<<<<<<<<< * cdef object attribute_dict * cpdef int getMaxFields(self) */ struct __pyx_vtabstruct_5pysam_16libctabixproxies_GTFProxy { struct __pyx_vtabstruct_5pysam_16libctabixproxies_NamedTupleProxy __pyx_base; }; static struct __pyx_vtabstruct_5pysam_16libctabixproxies_GTFProxy *__pyx_vtabptr_5pysam_16libctabixproxies_GTFProxy; /* "pysam/libctabixproxies.pxd":42 * * * cdef class GFF3Proxy(GTFProxy): # <<<<<<<<<<<<<< * pass * */ struct __pyx_vtabstruct_5pysam_16libctabixproxies_GFF3Proxy { struct __pyx_vtabstruct_5pysam_16libctabixproxies_GTFProxy __pyx_base; }; static struct __pyx_vtabstruct_5pysam_16libctabixproxies_GFF3Proxy *__pyx_vtabptr_5pysam_16libctabixproxies_GFF3Proxy; /* "pysam/libctabixproxies.pxd":46 * * * cdef class BedProxy(NamedTupleProxy): # <<<<<<<<<<<<<< * * cdef: */ struct __pyx_vtabstruct_5pysam_16libctabixproxies_BedProxy { struct __pyx_vtabstruct_5pysam_16libctabixproxies_NamedTupleProxy __pyx_base; }; static struct __pyx_vtabstruct_5pysam_16libctabixproxies_BedProxy *__pyx_vtabptr_5pysam_16libctabixproxies_BedProxy; /* "pysam/libctabixproxies.pxd":58 * cdef update(self, char * buffer, size_t nbytes) * * cdef class VCFProxy(NamedTupleProxy) : # <<<<<<<<<<<<<< * * cdef: */ struct __pyx_vtabstruct_5pysam_16libctabixproxies_VCFProxy { struct __pyx_vtabstruct_5pysam_16libctabixproxies_NamedTupleProxy __pyx_base; }; static struct __pyx_vtabstruct_5pysam_16libctabixproxies_VCFProxy *__pyx_vtabptr_5pysam_16libctabixproxies_VCFProxy; /* "pysam/libctabix.pyx":1098 * * * cdef class tabix_file_iterator: # <<<<<<<<<<<<<< * '''iterate over a compressed or uncompressed ``infile``. * ''' */ struct __pyx_vtabstruct_5pysam_9libctabix_tabix_file_iterator { PyObject *(*__pyx___cnext__)(struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *); }; static struct __pyx_vtabstruct_5pysam_9libctabix_tabix_file_iterator *__pyx_vtabptr_5pysam_9libctabix_tabix_file_iterator; /* "pysam/libctabix.pyx":287 * * * cdef class TabixFile: # <<<<<<<<<<<<<< * """Random access to bgzf formatted files that * have been indexed by :term:`tabix`. */ struct __pyx_vtabstruct_5pysam_9libctabix_TabixFile { struct __pyx_vtabstruct_5pysam_10libchtslib_HTSFile __pyx_base; }; static struct __pyx_vtabstruct_5pysam_9libctabix_TabixFile *__pyx_vtabptr_5pysam_9libctabix_TabixFile; /* "pysam/libctabix.pyx":82 * from pysam.libcutils cimport encode_filename, from_string_and_size * * cdef class Parser: # <<<<<<<<<<<<<< * * def __init__(self, encoding="ascii"): */ struct __pyx_vtabstruct_5pysam_9libctabix_Parser { PyObject *(*parse)(struct __pyx_obj_5pysam_9libctabix_Parser *, char *, int); }; static struct __pyx_vtabstruct_5pysam_9libctabix_Parser *__pyx_vtabptr_5pysam_9libctabix_Parser; /* "pysam/libctabix.pyx":101 * * * cdef class asTuple(Parser): # <<<<<<<<<<<<<< * '''converts a :term:`tabix row` into a python tuple. * */ struct __pyx_vtabstruct_5pysam_9libctabix_asTuple { struct __pyx_vtabstruct_5pysam_9libctabix_Parser __pyx_base; 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/* ParseKeywords.proto */ static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject *const *kwvalues, PyObject **argnames[], PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args, const char* function_name); /* RaiseArgTupleInvalid.proto */ static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact, Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found); /* Profile.proto */ #ifndef CYTHON_PROFILE #if CYTHON_COMPILING_IN_LIMITED_API || CYTHON_COMPILING_IN_PYPY #define CYTHON_PROFILE 0 #else #define CYTHON_PROFILE 1 #endif #endif #ifndef CYTHON_TRACE_NOGIL #define CYTHON_TRACE_NOGIL 0 #else #if CYTHON_TRACE_NOGIL && !defined(CYTHON_TRACE) #define CYTHON_TRACE 1 #endif #endif #ifndef CYTHON_TRACE #define CYTHON_TRACE 0 #endif #if CYTHON_TRACE #undef CYTHON_PROFILE_REUSE_FRAME #endif #ifndef CYTHON_PROFILE_REUSE_FRAME #define CYTHON_PROFILE_REUSE_FRAME 0 #endif #if CYTHON_PROFILE || CYTHON_TRACE #include "compile.h" #include "frameobject.h" #include "traceback.h" #if PY_VERSION_HEX >= 0x030b00a6 #ifndef Py_BUILD_CORE #define Py_BUILD_CORE 1 #endif #include "internal/pycore_frame.h" #endif #if CYTHON_PROFILE_REUSE_FRAME #define CYTHON_FRAME_MODIFIER static #define CYTHON_FRAME_DEL(frame) #else #define CYTHON_FRAME_MODIFIER #define CYTHON_FRAME_DEL(frame) Py_CLEAR(frame) #endif #define __Pyx_TraceDeclarations\ static PyCodeObject *__pyx_frame_code = NULL;\ CYTHON_FRAME_MODIFIER PyFrameObject *__pyx_frame = NULL;\ int __Pyx_use_tracing = 0; #define __Pyx_TraceFrameInit(codeobj)\ if (codeobj) __pyx_frame_code = (PyCodeObject*) codeobj; #if PY_VERSION_HEX >= 0x030b00a2 #if PY_VERSION_HEX >= 0x030C00b1 #define __Pyx_IsTracing(tstate, check_tracing, check_funcs)\ ((!(check_tracing) || !(tstate)->tracing) &&\ (!(check_funcs) || (tstate)->c_profilefunc || (CYTHON_TRACE && (tstate)->c_tracefunc))) #else #define __Pyx_IsTracing(tstate, check_tracing, check_funcs)\ (unlikely((tstate)->cframe->use_tracing) &&\ (!(check_tracing) || !(tstate)->tracing) &&\ (!(check_funcs) || (tstate)->c_profilefunc || (CYTHON_TRACE && (tstate)->c_tracefunc))) #endif #define __Pyx_EnterTracing(tstate) PyThreadState_EnterTracing(tstate) #define __Pyx_LeaveTracing(tstate) PyThreadState_LeaveTracing(tstate) #elif PY_VERSION_HEX >= 0x030a00b1 #define __Pyx_IsTracing(tstate, check_tracing, check_funcs)\ (unlikely((tstate)->cframe->use_tracing) &&\ (!(check_tracing) || !(tstate)->tracing) &&\ (!(check_funcs) || (tstate)->c_profilefunc || (CYTHON_TRACE && (tstate)->c_tracefunc))) #define __Pyx_EnterTracing(tstate)\ do { tstate->tracing++; tstate->cframe->use_tracing = 0; } while (0) #define __Pyx_LeaveTracing(tstate)\ do {\ tstate->tracing--;\ tstate->cframe->use_tracing = ((CYTHON_TRACE && tstate->c_tracefunc != NULL)\ || tstate->c_profilefunc != NULL);\ } while (0) #else #define __Pyx_IsTracing(tstate, check_tracing, check_funcs)\ (unlikely((tstate)->use_tracing) &&\ (!(check_tracing) || !(tstate)->tracing) &&\ (!(check_funcs) || (tstate)->c_profilefunc || (CYTHON_TRACE && (tstate)->c_tracefunc))) #define __Pyx_EnterTracing(tstate)\ do { tstate->tracing++; tstate->use_tracing = 0; } while (0) #define __Pyx_LeaveTracing(tstate)\ do {\ tstate->tracing--;\ tstate->use_tracing = ((CYTHON_TRACE && tstate->c_tracefunc != NULL)\ || tstate->c_profilefunc != NULL);\ } while (0) #endif #ifdef WITH_THREAD #define __Pyx_TraceCall(funcname, srcfile, firstlineno, nogil, goto_error)\ if (nogil) {\ if (CYTHON_TRACE_NOGIL) {\ PyThreadState *tstate;\ PyGILState_STATE state = PyGILState_Ensure();\ tstate = __Pyx_PyThreadState_Current;\ if (__Pyx_IsTracing(tstate, 1, 1)) {\ __Pyx_use_tracing = __Pyx_TraceSetupAndCall(&__pyx_frame_code, &__pyx_frame, tstate, funcname, srcfile, firstlineno);\ }\ PyGILState_Release(state);\ if (unlikely(__Pyx_use_tracing < 0)) goto_error;\ }\ } else {\ PyThreadState* tstate = PyThreadState_GET();\ if (__Pyx_IsTracing(tstate, 1, 1)) {\ __Pyx_use_tracing = __Pyx_TraceSetupAndCall(&__pyx_frame_code, &__pyx_frame, tstate, funcname, srcfile, firstlineno);\ if (unlikely(__Pyx_use_tracing < 0)) goto_error;\ }\ } #else #define __Pyx_TraceCall(funcname, srcfile, firstlineno, nogil, goto_error)\ { PyThreadState* tstate = PyThreadState_GET();\ if (__Pyx_IsTracing(tstate, 1, 1)) {\ __Pyx_use_tracing = __Pyx_TraceSetupAndCall(&__pyx_frame_code, &__pyx_frame, tstate, funcname, srcfile, firstlineno);\ if (unlikely(__Pyx_use_tracing < 0)) goto_error;\ }\ } #endif #define __Pyx_TraceException()\ if (likely(!__Pyx_use_tracing)); else {\ PyThreadState* tstate = __Pyx_PyThreadState_Current;\ if (__Pyx_IsTracing(tstate, 0, 1)) {\ __Pyx_EnterTracing(tstate);\ PyObject *exc_info = __Pyx_GetExceptionTuple(tstate);\ if (exc_info) {\ if (CYTHON_TRACE && tstate->c_tracefunc)\ tstate->c_tracefunc(\ tstate->c_traceobj, __pyx_frame, PyTrace_EXCEPTION, exc_info);\ tstate->c_profilefunc(\ tstate->c_profileobj, __pyx_frame, PyTrace_EXCEPTION, exc_info);\ Py_DECREF(exc_info);\ }\ __Pyx_LeaveTracing(tstate);\ }\ } static void __Pyx_call_return_trace_func(PyThreadState *tstate, PyFrameObject *frame, PyObject *result) { PyObject *type, *value, *traceback; __Pyx_ErrFetchInState(tstate, &type, &value, &traceback); __Pyx_EnterTracing(tstate); if (CYTHON_TRACE && tstate->c_tracefunc) tstate->c_tracefunc(tstate->c_traceobj, frame, PyTrace_RETURN, result); if (tstate->c_profilefunc) tstate->c_profilefunc(tstate->c_profileobj, frame, PyTrace_RETURN, result); CYTHON_FRAME_DEL(frame); __Pyx_LeaveTracing(tstate); __Pyx_ErrRestoreInState(tstate, type, value, traceback); } #ifdef WITH_THREAD #define __Pyx_TraceReturn(result, nogil)\ if (likely(!__Pyx_use_tracing)); else {\ if (nogil) {\ if (CYTHON_TRACE_NOGIL) {\ PyThreadState *tstate;\ PyGILState_STATE state = PyGILState_Ensure();\ tstate = __Pyx_PyThreadState_Current;\ if (__Pyx_IsTracing(tstate, 0, 0)) {\ __Pyx_call_return_trace_func(tstate, __pyx_frame, (PyObject*)result);\ }\ PyGILState_Release(state);\ }\ } else {\ PyThreadState* tstate = __Pyx_PyThreadState_Current;\ if (__Pyx_IsTracing(tstate, 0, 0)) {\ __Pyx_call_return_trace_func(tstate, __pyx_frame, (PyObject*)result);\ }\ }\ } #else #define __Pyx_TraceReturn(result, nogil)\ if (likely(!__Pyx_use_tracing)); else {\ PyThreadState* tstate = __Pyx_PyThreadState_Current;\ if (__Pyx_IsTracing(tstate, 0, 0)) {\ __Pyx_call_return_trace_func(tstate, __pyx_frame, (PyObject*)result);\ }\ } #endif static PyCodeObject *__Pyx_createFrameCodeObject(const char *funcname, const char *srcfile, int firstlineno); static int __Pyx_TraceSetupAndCall(PyCodeObject** code, PyFrameObject** frame, PyThreadState* tstate, const char *funcname, const char *srcfile, int firstlineno); #else #define __Pyx_TraceDeclarations #define __Pyx_TraceFrameInit(codeobj) #define __Pyx_TraceCall(funcname, srcfile, firstlineno, nogil, goto_error) if ((1)); else goto_error; #define __Pyx_TraceException() #define __Pyx_TraceReturn(result, nogil) #endif #if CYTHON_TRACE static int __Pyx_call_line_trace_func(PyThreadState *tstate, PyFrameObject *frame, int lineno) { int ret; PyObject *type, *value, *traceback; __Pyx_ErrFetchInState(tstate, &type, &value, &traceback); __Pyx_PyFrame_SetLineNumber(frame, lineno); __Pyx_EnterTracing(tstate); ret = tstate->c_tracefunc(tstate->c_traceobj, frame, PyTrace_LINE, NULL); __Pyx_LeaveTracing(tstate); if (likely(!ret)) { __Pyx_ErrRestoreInState(tstate, type, value, traceback); } else { Py_XDECREF(type); Py_XDECREF(value); Py_XDECREF(traceback); } return ret; } #ifdef WITH_THREAD #define __Pyx_TraceLine(lineno, nogil, goto_error)\ if (likely(!__Pyx_use_tracing)); else {\ if (nogil) {\ if (CYTHON_TRACE_NOGIL) {\ int ret = 0;\ PyThreadState *tstate;\ PyGILState_STATE state = __Pyx_PyGILState_Ensure();\ tstate = __Pyx_PyThreadState_Current;\ if (__Pyx_IsTracing(tstate, 0, 0) && tstate->c_tracefunc && __pyx_frame->f_trace) {\ ret = __Pyx_call_line_trace_func(tstate, __pyx_frame, lineno);\ }\ __Pyx_PyGILState_Release(state);\ if (unlikely(ret)) goto_error;\ }\ } else {\ PyThreadState* tstate = __Pyx_PyThreadState_Current;\ if (__Pyx_IsTracing(tstate, 0, 0) && tstate->c_tracefunc && __pyx_frame->f_trace) {\ int ret = __Pyx_call_line_trace_func(tstate, __pyx_frame, lineno);\ if (unlikely(ret)) goto_error;\ }\ }\ } #else #define __Pyx_TraceLine(lineno, nogil, goto_error)\ if (likely(!__Pyx_use_tracing)); else {\ PyThreadState* tstate = __Pyx_PyThreadState_Current;\ if (__Pyx_IsTracing(tstate, 0, 0) && tstate->c_tracefunc && __pyx_frame->f_trace) {\ int ret = __Pyx_call_line_trace_func(tstate, __pyx_frame, lineno);\ if (unlikely(ret)) goto_error;\ }\ } #endif #else #define __Pyx_TraceLine(lineno, nogil, goto_error) if ((1)); else goto_error; #endif /* KeywordStringCheck.proto */ static int __Pyx_CheckKeywordStrings(PyObject *kw, const char* function_name, int kw_allowed); /* PyObject_Unicode.proto */ #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyObject_Unicode(obj)\ (likely(PyUnicode_CheckExact(obj)) ? __Pyx_NewRef(obj) : PyObject_Str(obj)) #else #define __Pyx_PyObject_Unicode(obj)\ (likely(PyUnicode_CheckExact(obj)) ? __Pyx_NewRef(obj) : PyObject_Unicode(obj)) #endif /* PyFunctionFastCall.proto */ #if CYTHON_FAST_PYCALL #if !CYTHON_VECTORCALL #define __Pyx_PyFunction_FastCall(func, args, nargs)\ __Pyx_PyFunction_FastCallDict((func), (args), (nargs), NULL) static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, Py_ssize_t nargs, PyObject *kwargs); #endif #define __Pyx_BUILD_ASSERT_EXPR(cond)\ (sizeof(char [1 - 2*!(cond)]) - 1) #ifndef Py_MEMBER_SIZE #define Py_MEMBER_SIZE(type, member) sizeof(((type *)0)->member) #endif #if !CYTHON_VECTORCALL #if PY_VERSION_HEX >= 0x03080000 #include "frameobject.h" #if PY_VERSION_HEX >= 0x030b00a6 && !CYTHON_COMPILING_IN_LIMITED_API #ifndef Py_BUILD_CORE #define Py_BUILD_CORE 1 #endif #include "internal/pycore_frame.h" #endif #define __Pxy_PyFrame_Initialize_Offsets() #define __Pyx_PyFrame_GetLocalsplus(frame) ((frame)->f_localsplus) #else static size_t __pyx_pyframe_localsplus_offset = 0; #include "frameobject.h" #define __Pxy_PyFrame_Initialize_Offsets()\ ((void)__Pyx_BUILD_ASSERT_EXPR(sizeof(PyFrameObject) == offsetof(PyFrameObject, f_localsplus) + Py_MEMBER_SIZE(PyFrameObject, f_localsplus)),\ (void)(__pyx_pyframe_localsplus_offset = ((size_t)PyFrame_Type.tp_basicsize) - Py_MEMBER_SIZE(PyFrameObject, f_localsplus))) #define __Pyx_PyFrame_GetLocalsplus(frame)\ (assert(__pyx_pyframe_localsplus_offset), (PyObject **)(((char *)(frame)) + __pyx_pyframe_localsplus_offset)) #endif #endif #endif /* PyObjectCall.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); #else #define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw) #endif /* PyObjectCallMethO.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); #endif /* PyObjectFastCall.proto */ #define __Pyx_PyObject_FastCall(func, args, nargs) __Pyx_PyObject_FastCallDict(func, args, (size_t)(nargs), NULL) static CYTHON_INLINE PyObject* __Pyx_PyObject_FastCallDict(PyObject *func, PyObject **args, size_t nargs, PyObject *kwargs); /* PyObjectCallOneArg.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); /* RaiseException.proto */ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); /* GetAttr3.proto */ static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *, PyObject *, PyObject *); /* PyDictVersioning.proto */ #if CYTHON_USE_DICT_VERSIONS && CYTHON_USE_TYPE_SLOTS #define __PYX_DICT_VERSION_INIT ((PY_UINT64_T) -1) #define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag) #define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)\ (version_var) = __PYX_GET_DICT_VERSION(dict);\ (cache_var) = (value); #define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) {\ static PY_UINT64_T __pyx_dict_version = 0;\ static PyObject *__pyx_dict_cached_value = NULL;\ if (likely(__PYX_GET_DICT_VERSION(DICT) == __pyx_dict_version)) {\ (VAR) = __pyx_dict_cached_value;\ } else {\ (VAR) = __pyx_dict_cached_value = (LOOKUP);\ __pyx_dict_version = __PYX_GET_DICT_VERSION(DICT);\ }\ } static CYTHON_INLINE PY_UINT64_T __Pyx_get_tp_dict_version(PyObject *obj); static CYTHON_INLINE PY_UINT64_T __Pyx_get_object_dict_version(PyObject *obj); static CYTHON_INLINE int __Pyx_object_dict_version_matches(PyObject* obj, PY_UINT64_T tp_dict_version, PY_UINT64_T obj_dict_version); #else #define __PYX_GET_DICT_VERSION(dict) (0) #define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var) #define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) (VAR) = (LOOKUP); #endif /* GetModuleGlobalName.proto */ #if CYTHON_USE_DICT_VERSIONS #define __Pyx_GetModuleGlobalName(var, name) do {\ static PY_UINT64_T __pyx_dict_version = 0;\ static PyObject *__pyx_dict_cached_value = NULL;\ (var) = (likely(__pyx_dict_version == __PYX_GET_DICT_VERSION(__pyx_d))) ?\ (likely(__pyx_dict_cached_value) ? __Pyx_NewRef(__pyx_dict_cached_value) : __Pyx_GetBuiltinName(name)) :\ __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ } while(0) #define __Pyx_GetModuleGlobalNameUncached(var, name) do {\ PY_UINT64_T __pyx_dict_version;\ PyObject *__pyx_dict_cached_value;\ (var) = __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ } while(0) static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value); #else #define __Pyx_GetModuleGlobalName(var, name) (var) = __Pyx__GetModuleGlobalName(name) #define __Pyx_GetModuleGlobalNameUncached(var, name) (var) = __Pyx__GetModuleGlobalName(name) static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name); #endif /* RaiseUnexpectedTypeError.proto */ static int __Pyx_RaiseUnexpectedTypeError(const char *expected, PyObject *obj); /* ExtTypeTest.proto */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); /* PyIntBinop.proto */ #if !CYTHON_COMPILING_IN_PYPY static PyObject* __Pyx_PyInt_AddObjC(PyObject *op1, PyObject *op2, long intval, int inplace, int zerodivision_check); #else #define __Pyx_PyInt_AddObjC(op1, op2, intval, inplace, zerodivision_check)\ (inplace ? PyNumber_InPlaceAdd(op1, op2) : PyNumber_Add(op1, op2)) #endif /* ListAppend.proto */ #if CYTHON_USE_PYLIST_INTERNALS && CYTHON_ASSUME_SAFE_MACROS static CYTHON_INLINE int __Pyx_PyList_Append(PyObject* list, PyObject* x) { PyListObject* L = (PyListObject*) list; Py_ssize_t len = Py_SIZE(list); if (likely(L->allocated > len) & likely(len > (L->allocated >> 1))) { Py_INCREF(x); #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030d0000 L->ob_item[len] = x; #else PyList_SET_ITEM(list, len, x); #endif __Pyx_SET_SIZE(list, len + 1); return 0; } return PyList_Append(list, x); } #else #define __Pyx_PyList_Append(L,x) PyList_Append(L,x) #endif /* WriteUnraisableException.proto */ static void __Pyx_WriteUnraisable(const char *name, int clineno, int lineno, const char *filename, int full_traceback, int nogil); /* PyObjectCallNoArg.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallNoArg(PyObject *func); /* ArgTypeTest.proto */ #define __Pyx_ArgTypeTest(obj, type, none_allowed, name, exact)\ ((likely(__Pyx_IS_TYPE(obj, type) | (none_allowed && (obj == Py_None)))) ? 1 :\ __Pyx__ArgTypeTest(obj, type, name, exact)) static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact); /* PyObjectFormatAndDecref.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_FormatSimpleAndDecref(PyObject* s, PyObject* f); static CYTHON_INLINE PyObject* __Pyx_PyObject_FormatAndDecref(PyObject* s, PyObject* f); /* JoinPyUnicode.proto */ static PyObject* __Pyx_PyUnicode_Join(PyObject* value_tuple, Py_ssize_t value_count, Py_ssize_t result_ulength, Py_UCS4 max_char); /* DictGetItem.proto */ #if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key); #define __Pyx_PyObject_Dict_GetItem(obj, name)\ (likely(PyDict_CheckExact(obj)) ?\ __Pyx_PyDict_GetItem(obj, name) : PyObject_GetItem(obj, name)) #else #define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) #define __Pyx_PyObject_Dict_GetItem(obj, name) PyObject_GetItem(obj, name) #endif /* GetTopmostException.proto */ #if CYTHON_USE_EXC_INFO_STACK && CYTHON_FAST_THREAD_STATE static _PyErr_StackItem * __Pyx_PyErr_GetTopmostException(PyThreadState *tstate); #endif /* SaveResetException.proto */ #if CYTHON_FAST_THREAD_STATE #define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb) static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); #define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb) static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); #else #define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb) #define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb) #endif /* GetException.proto */ #if CYTHON_FAST_THREAD_STATE #define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb) static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); #else static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); #endif /* py_dict_keys.proto */ static CYTHON_INLINE PyObject* __Pyx_PyDict_Keys(PyObject* d); /* UnpackUnboundCMethod.proto */ typedef struct { PyObject *type; PyObject **method_name; PyCFunction func; PyObject *method; int flag; } __Pyx_CachedCFunction; /* CallUnboundCMethod0.proto */ static PyObject* __Pyx__CallUnboundCMethod0(__Pyx_CachedCFunction* cfunc, PyObject* self); #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_CallUnboundCMethod0(cfunc, self)\ (likely((cfunc)->func) ?\ (likely((cfunc)->flag == METH_NOARGS) ? (*((cfunc)->func))(self, NULL) :\ (PY_VERSION_HEX >= 0x030600B1 && likely((cfunc)->flag == METH_FASTCALL) ?\ (PY_VERSION_HEX >= 0x030700A0 ?\ (*(__Pyx_PyCFunctionFast)(void*)(PyCFunction)(cfunc)->func)(self, &__pyx_empty_tuple, 0) :\ (*(__Pyx_PyCFunctionFastWithKeywords)(void*)(PyCFunction)(cfunc)->func)(self, &__pyx_empty_tuple, 0, NULL)) :\ (PY_VERSION_HEX >= 0x030700A0 && (cfunc)->flag == (METH_FASTCALL | METH_KEYWORDS) ?\ (*(__Pyx_PyCFunctionFastWithKeywords)(void*)(PyCFunction)(cfunc)->func)(self, &__pyx_empty_tuple, 0, NULL) :\ (likely((cfunc)->flag == (METH_VARARGS | METH_KEYWORDS)) ? ((*(PyCFunctionWithKeywords)(void*)(PyCFunction)(cfunc)->func)(self, __pyx_empty_tuple, NULL)) :\ ((cfunc)->flag == METH_VARARGS ? (*((cfunc)->func))(self, __pyx_empty_tuple) :\ __Pyx__CallUnboundCMethod0(cfunc, self)))))) :\ __Pyx__CallUnboundCMethod0(cfunc, self)) #else #define __Pyx_CallUnboundCMethod0(cfunc, self) __Pyx__CallUnboundCMethod0(cfunc, self) #endif /* UnicodeAsUCS4.proto */ static CYTHON_INLINE Py_UCS4 __Pyx_PyUnicode_AsPy_UCS4(PyObject*); /* object_ord.proto */ #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyObject_Ord(c)\ (likely(PyUnicode_Check(c)) ? (long)__Pyx_PyUnicode_AsPy_UCS4(c) : __Pyx__PyObject_Ord(c)) #else #define __Pyx_PyObject_Ord(c) __Pyx__PyObject_Ord(c) #endif static long __Pyx__PyObject_Ord(PyObject* c); /* RaiseTooManyValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected); /* RaiseNeedMoreValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index); /* IterFinish.proto */ static CYTHON_INLINE int __Pyx_IterFinish(void); /* UnpackItemEndCheck.proto */ static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected); /* PyObjectSetAttrStr.proto */ #if CYTHON_USE_TYPE_SLOTS #define __Pyx_PyObject_DelAttrStr(o,n) __Pyx_PyObject_SetAttrStr(o, n, NULL) static CYTHON_INLINE int __Pyx_PyObject_SetAttrStr(PyObject* obj, PyObject* attr_name, PyObject* value); #else #define __Pyx_PyObject_DelAttrStr(o,n) PyObject_DelAttr(o,n) #define __Pyx_PyObject_SetAttrStr(o,n,v) PyObject_SetAttr(o,n,v) #endif /* AssertionsEnabled.proto */ #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 && !defined(Py_OptimizeFlag) #define __Pyx_init_assertions_enabled() (0) #define __pyx_assertions_enabled() (1) #elif CYTHON_COMPILING_IN_LIMITED_API || (CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030C0000) static int __pyx_assertions_enabled_flag; #define __pyx_assertions_enabled() (__pyx_assertions_enabled_flag) static int __Pyx_init_assertions_enabled(void) { PyObject *builtins, *debug, *debug_str; int flag; builtins = PyEval_GetBuiltins(); if (!builtins) goto bad; debug_str = PyUnicode_FromStringAndSize("__debug__", 9); if (!debug_str) goto bad; debug = PyObject_GetItem(builtins, debug_str); Py_DECREF(debug_str); if (!debug) goto bad; flag = PyObject_IsTrue(debug); Py_DECREF(debug); if (flag == -1) goto bad; __pyx_assertions_enabled_flag = flag; return 0; bad: __pyx_assertions_enabled_flag = 1; return -1; } #else #define __Pyx_init_assertions_enabled() (0) #define __pyx_assertions_enabled() (!Py_OptimizeFlag) #endif /* PySequenceContains.proto */ static CYTHON_INLINE int __Pyx_PySequence_ContainsTF(PyObject* item, PyObject* seq, int eq) { int result = PySequence_Contains(seq, item); return unlikely(result < 0) ? result : (result == (eq == Py_EQ)); } /* Import.proto */ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); /* ImportFrom.proto */ static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name); /* GetItemInt.proto */ #define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\ __Pyx_GetItemInt_Generic(o, to_py_func(i)))) #define __Pyx_GetItemInt_List(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ __Pyx_GetItemInt_List_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL)) static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, int wraparound, int boundscheck); #define __Pyx_GetItemInt_Tuple(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ __Pyx_GetItemInt_Tuple_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ (PyErr_SetString(PyExc_IndexError, "tuple index out of range"), (PyObject*)NULL)) static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, int wraparound, int boundscheck); static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j); static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, int wraparound, int boundscheck); /* GetAttr.proto */ static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *, PyObject *); /* HasAttr.proto */ static CYTHON_INLINE int __Pyx_HasAttr(PyObject *, PyObject *); /* CallNextTpDealloc.proto */ static void __Pyx_call_next_tp_dealloc(PyObject* obj, destructor current_tp_dealloc); /* CallNextTpTraverse.proto */ static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse); /* CallNextTpClear.proto */ static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear); /* IncludeStructmemberH.proto */ #include <structmember.h> /* FixUpExtensionType.proto */ #if CYTHON_USE_TYPE_SPECS static int __Pyx_fix_up_extension_type_from_spec(PyType_Spec *spec, PyTypeObject *type); #endif /* PyObjectGetMethod.proto */ static int __Pyx_PyObject_GetMethod(PyObject *obj, PyObject *name, PyObject **method); /* PyObjectCallMethod0.proto */ static PyObject* __Pyx_PyObject_CallMethod0(PyObject* obj, PyObject* method_name); /* ValidateBasesTuple.proto */ #if CYTHON_COMPILING_IN_CPYTHON || CYTHON_COMPILING_IN_LIMITED_API || CYTHON_USE_TYPE_SPECS static int __Pyx_validate_bases_tuple(const char *type_name, Py_ssize_t dictoffset, PyObject *bases); #endif /* PyType_Ready.proto */ CYTHON_UNUSED static int __Pyx_PyType_Ready(PyTypeObject *t); /* PyObject_GenericGetAttrNoDict.proto */ #if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name); #else #define __Pyx_PyObject_GenericGetAttrNoDict PyObject_GenericGetAttr #endif /* PyObject_GenericGetAttr.proto */ #if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name); #else #define __Pyx_PyObject_GenericGetAttr PyObject_GenericGetAttr #endif /* SetVTable.proto */ static int __Pyx_SetVtable(PyTypeObject* typeptr , void* vtable); /* GetVTable.proto */ static void* __Pyx_GetVtable(PyTypeObject *type); /* MergeVTables.proto */ #if !CYTHON_COMPILING_IN_LIMITED_API static int __Pyx_MergeVtables(PyTypeObject *type); #endif /* SetupReduce.proto */ #if !CYTHON_COMPILING_IN_LIMITED_API static int __Pyx_setup_reduce(PyObject* type_obj); #endif /* TypeImport.proto */ #ifndef __PYX_HAVE_RT_ImportType_proto_3_0_11 #define __PYX_HAVE_RT_ImportType_proto_3_0_11 #if defined (__STDC_VERSION__) && __STDC_VERSION__ >= 201112L #include <stdalign.h> #endif #if (defined (__STDC_VERSION__) && __STDC_VERSION__ >= 201112L) || __cplusplus >= 201103L #define __PYX_GET_STRUCT_ALIGNMENT_3_0_11(s) alignof(s) #else #define __PYX_GET_STRUCT_ALIGNMENT_3_0_11(s) sizeof(void*) #endif enum __Pyx_ImportType_CheckSize_3_0_11 { __Pyx_ImportType_CheckSize_Error_3_0_11 = 0, __Pyx_ImportType_CheckSize_Warn_3_0_11 = 1, __Pyx_ImportType_CheckSize_Ignore_3_0_11 = 2 }; static PyTypeObject *__Pyx_ImportType_3_0_11(PyObject* module, const char *module_name, const char *class_name, size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_11 check_size); #endif /* ImportDottedModule.proto */ static PyObject *__Pyx_ImportDottedModule(PyObject *name, PyObject *parts_tuple); #if PY_MAJOR_VERSION >= 3 static PyObject *__Pyx_ImportDottedModule_WalkParts(PyObject *module, PyObject *name, PyObject *parts_tuple); #endif /* FetchSharedCythonModule.proto */ static PyObject *__Pyx_FetchSharedCythonABIModule(void); /* FetchCommonType.proto */ #if !CYTHON_USE_TYPE_SPECS static PyTypeObject* __Pyx_FetchCommonType(PyTypeObject* type); #else static PyTypeObject* __Pyx_FetchCommonTypeFromSpec(PyObject *module, PyType_Spec *spec, PyObject *bases); #endif /* PyMethodNew.proto */ #if CYTHON_COMPILING_IN_LIMITED_API static PyObject *__Pyx_PyMethod_New(PyObject *func, PyObject *self, PyObject *typ) { PyObject *typesModule=NULL, *methodType=NULL, *result=NULL; CYTHON_UNUSED_VAR(typ); if (!self) return __Pyx_NewRef(func); typesModule = PyImport_ImportModule("types"); if (!typesModule) return NULL; methodType = PyObject_GetAttrString(typesModule, "MethodType"); Py_DECREF(typesModule); if (!methodType) return NULL; result = PyObject_CallFunctionObjArgs(methodType, func, self, NULL); Py_DECREF(methodType); return result; } #elif PY_MAJOR_VERSION >= 3 static PyObject *__Pyx_PyMethod_New(PyObject *func, PyObject *self, PyObject *typ) { CYTHON_UNUSED_VAR(typ); if (!self) return __Pyx_NewRef(func); return PyMethod_New(func, self); } #else #define __Pyx_PyMethod_New PyMethod_New #endif /* PyVectorcallFastCallDict.proto */ #if CYTHON_METH_FASTCALL static CYTHON_INLINE PyObject *__Pyx_PyVectorcall_FastCallDict(PyObject *func, __pyx_vectorcallfunc vc, PyObject *const *args, size_t nargs, PyObject *kw); #endif /* CythonFunctionShared.proto */ #define __Pyx_CyFunction_USED #define __Pyx_CYFUNCTION_STATICMETHOD 0x01 #define __Pyx_CYFUNCTION_CLASSMETHOD 0x02 #define __Pyx_CYFUNCTION_CCLASS 0x04 #define __Pyx_CYFUNCTION_COROUTINE 0x08 #define __Pyx_CyFunction_GetClosure(f)\ (((__pyx_CyFunctionObject *) (f))->func_closure) #if PY_VERSION_HEX < 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API #define __Pyx_CyFunction_GetClassObj(f)\ (((__pyx_CyFunctionObject *) (f))->func_classobj) #else #define __Pyx_CyFunction_GetClassObj(f)\ ((PyObject*) ((PyCMethodObject *) (f))->mm_class) #endif #define __Pyx_CyFunction_SetClassObj(f, classobj)\ __Pyx__CyFunction_SetClassObj((__pyx_CyFunctionObject *) (f), (classobj)) #define __Pyx_CyFunction_Defaults(type, f)\ ((type *)(((__pyx_CyFunctionObject *) (f))->defaults)) #define __Pyx_CyFunction_SetDefaultsGetter(f, g)\ ((__pyx_CyFunctionObject *) (f))->defaults_getter = (g) typedef struct { #if CYTHON_COMPILING_IN_LIMITED_API PyObject_HEAD PyObject *func; #elif PY_VERSION_HEX < 0x030900B1 PyCFunctionObject func; #else PyCMethodObject func; #endif #if CYTHON_BACKPORT_VECTORCALL __pyx_vectorcallfunc func_vectorcall; #endif #if PY_VERSION_HEX < 0x030500A0 || CYTHON_COMPILING_IN_LIMITED_API PyObject *func_weakreflist; #endif PyObject *func_dict; PyObject *func_name; PyObject *func_qualname; PyObject *func_doc; PyObject *func_globals; PyObject *func_code; PyObject *func_closure; #if PY_VERSION_HEX < 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API PyObject *func_classobj; #endif void *defaults; int defaults_pyobjects; size_t defaults_size; int flags; PyObject *defaults_tuple; PyObject *defaults_kwdict; PyObject *(*defaults_getter)(PyObject *); PyObject *func_annotations; PyObject *func_is_coroutine; } __pyx_CyFunctionObject; #undef __Pyx_CyOrPyCFunction_Check #define __Pyx_CyFunction_Check(obj) __Pyx_TypeCheck(obj, __pyx_CyFunctionType) #define __Pyx_CyOrPyCFunction_Check(obj) __Pyx_TypeCheck2(obj, __pyx_CyFunctionType, &PyCFunction_Type) #define __Pyx_CyFunction_CheckExact(obj) __Pyx_IS_TYPE(obj, __pyx_CyFunctionType) static CYTHON_INLINE int __Pyx__IsSameCyOrCFunction(PyObject *func, void *cfunc); #undef __Pyx_IsSameCFunction #define __Pyx_IsSameCFunction(func, cfunc) __Pyx__IsSameCyOrCFunction(func, cfunc) static PyObject *__Pyx_CyFunction_Init(__pyx_CyFunctionObject* op, PyMethodDef *ml, int flags, PyObject* qualname, PyObject *closure, PyObject *module, PyObject *globals, PyObject* code); static CYTHON_INLINE void __Pyx__CyFunction_SetClassObj(__pyx_CyFunctionObject* f, PyObject* classobj); static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *m, size_t size, int pyobjects); static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *m, PyObject *tuple); static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *m, PyObject *dict); static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *m, PyObject *dict); static int __pyx_CyFunction_init(PyObject *module); #if CYTHON_METH_FASTCALL static PyObject * __Pyx_CyFunction_Vectorcall_NOARGS(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames); static PyObject * __Pyx_CyFunction_Vectorcall_O(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames); static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames); static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS_METHOD(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames); #if CYTHON_BACKPORT_VECTORCALL #define __Pyx_CyFunction_func_vectorcall(f) (((__pyx_CyFunctionObject*)f)->func_vectorcall) #else #define __Pyx_CyFunction_func_vectorcall(f) (((PyCFunctionObject*)f)->vectorcall) #endif #endif /* CythonFunction.proto */ static PyObject *__Pyx_CyFunction_New(PyMethodDef *ml, int flags, PyObject* qualname, PyObject *closure, PyObject *module, PyObject *globals, PyObject* code); /* SetNameInClass.proto */ #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 && PY_VERSION_HEX < 0x030d0000 #define __Pyx_SetNameInClass(ns, name, value)\ (likely(PyDict_CheckExact(ns)) ? _PyDict_SetItem_KnownHash(ns, name, value, ((PyASCIIObject *) name)->hash) : PyObject_SetItem(ns, name, value)) #elif CYTHON_COMPILING_IN_CPYTHON #define __Pyx_SetNameInClass(ns, name, value)\ (likely(PyDict_CheckExact(ns)) ? PyDict_SetItem(ns, name, value) : PyObject_SetItem(ns, name, value)) #else #define __Pyx_SetNameInClass(ns, name, value) PyObject_SetItem(ns, name, value) #endif /* CalculateMetaclass.proto */ static PyObject *__Pyx_CalculateMetaclass(PyTypeObject *metaclass, PyObject *bases); /* PyObjectCall2Args.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2); /* PyObjectLookupSpecial.proto */ #if CYTHON_USE_PYTYPE_LOOKUP && CYTHON_USE_TYPE_SLOTS #define __Pyx_PyObject_LookupSpecialNoError(obj, attr_name) __Pyx__PyObject_LookupSpecial(obj, attr_name, 0) #define __Pyx_PyObject_LookupSpecial(obj, attr_name) __Pyx__PyObject_LookupSpecial(obj, attr_name, 1) static CYTHON_INLINE PyObject* __Pyx__PyObject_LookupSpecial(PyObject* obj, PyObject* attr_name, int with_error); #else #define __Pyx_PyObject_LookupSpecialNoError(o,n) __Pyx_PyObject_GetAttrStrNoError(o,n) #define __Pyx_PyObject_LookupSpecial(o,n) __Pyx_PyObject_GetAttrStr(o,n) #endif /* Py3ClassCreate.proto */ static PyObject *__Pyx_Py3MetaclassPrepare(PyObject *metaclass, PyObject *bases, PyObject *name, PyObject *qualname, PyObject *mkw, PyObject *modname, PyObject *doc); static PyObject *__Pyx_Py3ClassCreate(PyObject *metaclass, PyObject *name, PyObject *bases, PyObject *dict, PyObject *mkw, int calculate_metaclass, int allow_py2_metaclass); /* CLineInTraceback.proto */ #ifdef CYTHON_CLINE_IN_TRACEBACK #define __Pyx_CLineForTraceback(tstate, c_line) (((CYTHON_CLINE_IN_TRACEBACK)) ? c_line : 0) #else static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line); #endif /* CodeObjectCache.proto */ #if !CYTHON_COMPILING_IN_LIMITED_API typedef struct { PyCodeObject* code_object; int code_line; } __Pyx_CodeObjectCacheEntry; struct __Pyx_CodeObjectCache { int count; int max_count; __Pyx_CodeObjectCacheEntry* entries; }; static struct __Pyx_CodeObjectCache __pyx_code_cache = {0,0,NULL}; static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line); static PyCodeObject *__pyx_find_code_object(int code_line); static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object); #endif /* AddTraceback.proto */ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename); /* GCCDiagnostics.proto */ #if !defined(__INTEL_COMPILER) && defined(__GNUC__) && (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 6)) #define __Pyx_HAS_GCC_DIAGNOSTIC #endif /* ArrayAPI.proto */ #ifndef _ARRAYARRAY_H #define _ARRAYARRAY_H typedef struct arraydescr { int typecode; int itemsize; PyObject * (*getitem)(struct arrayobject *, Py_ssize_t); int (*setitem)(struct arrayobject *, Py_ssize_t, PyObject *); #if PY_MAJOR_VERSION >= 3 char *formats; #endif } arraydescr; struct arrayobject { PyObject_HEAD Py_ssize_t ob_size; union { char *ob_item; float *as_floats; double *as_doubles; int *as_ints; unsigned int *as_uints; unsigned char *as_uchars; signed char *as_schars; char *as_chars; unsigned long *as_ulongs; long *as_longs; #if PY_MAJOR_VERSION >= 3 unsigned long long *as_ulonglongs; long long *as_longlongs; #endif short *as_shorts; unsigned short *as_ushorts; Py_UNICODE *as_pyunicodes; void *as_voidptr; } data; Py_ssize_t allocated; struct arraydescr *ob_descr; PyObject *weakreflist; #if PY_MAJOR_VERSION >= 3 int ob_exports; #endif }; #ifndef NO_NEWARRAY_INLINE static CYTHON_INLINE PyObject * newarrayobject(PyTypeObject *type, Py_ssize_t size, struct arraydescr *descr) { arrayobject *op; size_t nbytes; if (size < 0) { PyErr_BadInternalCall(); return NULL; } nbytes = size * descr->itemsize; if (nbytes / descr->itemsize != (size_t)size) { return PyErr_NoMemory(); } op = (arrayobject *) type->tp_alloc(type, 0); if (op == NULL) { return NULL; } op->ob_descr = descr; op->allocated = size; op->weakreflist = NULL; __Pyx_SET_SIZE(op, size); if (size <= 0) { op->data.ob_item = NULL; } else { op->data.ob_item = PyMem_NEW(char, nbytes); if (op->data.ob_item == NULL) { Py_DECREF(op); return PyErr_NoMemory(); } } return (PyObject *) op; } #else PyObject* newarrayobject(PyTypeObject *type, Py_ssize_t size, struct arraydescr *descr); #endif static CYTHON_INLINE int resize(arrayobject *self, Py_ssize_t n) { void *items = (void*) self->data.ob_item; PyMem_Resize(items, char, (size_t)(n * self->ob_descr->itemsize)); if (items == NULL) { PyErr_NoMemory(); return -1; } self->data.ob_item = (char*) items; __Pyx_SET_SIZE(self, n); self->allocated = n; return 0; } static CYTHON_INLINE int resize_smart(arrayobject *self, Py_ssize_t n) { void *items = (void*) self->data.ob_item; Py_ssize_t newsize; if (n < self->allocated && n*4 > self->allocated) { __Pyx_SET_SIZE(self, n); return 0; } newsize = n + (n / 2) + 1; if (newsize <= n) { PyErr_NoMemory(); return -1; } PyMem_Resize(items, char, (size_t)(newsize * self->ob_descr->itemsize)); if (items == NULL) { PyErr_NoMemory(); return -1; } self->data.ob_item = (char*) items; __Pyx_SET_SIZE(self, n); self->allocated = newsize; return 0; } #endif /* CIntFromPy.proto */ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); /* CIntFromPy.proto */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); /* CIntFromPy.proto */ static CYTHON_INLINE int64_t __Pyx_PyInt_As_int64_t(PyObject *); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int32_t(int32_t value); /* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); /* CIntFromPy.proto */ static CYTHON_INLINE int32_t __Pyx_PyInt_As_int32_t(PyObject *); /* FormatTypeName.proto */ #if CYTHON_COMPILING_IN_LIMITED_API typedef PyObject *__Pyx_TypeName; #define __Pyx_FMT_TYPENAME "%U" static __Pyx_TypeName __Pyx_PyType_GetName(PyTypeObject* tp); #define __Pyx_DECREF_TypeName(obj) Py_XDECREF(obj) #else typedef const char *__Pyx_TypeName; #define __Pyx_FMT_TYPENAME "%.200s" #define __Pyx_PyType_GetName(tp) ((tp)->tp_name) #define __Pyx_DECREF_TypeName(obj) #endif /* FastTypeChecks.proto */ #if CYTHON_COMPILING_IN_CPYTHON #define __Pyx_TypeCheck(obj, type) __Pyx_IsSubtype(Py_TYPE(obj), (PyTypeObject *)type) #define __Pyx_TypeCheck2(obj, type1, type2) __Pyx_IsAnySubtype2(Py_TYPE(obj), (PyTypeObject *)type1, (PyTypeObject *)type2) static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b); static CYTHON_INLINE int __Pyx_IsAnySubtype2(PyTypeObject *cls, PyTypeObject *a, PyTypeObject *b); static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject *type); static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *type1, PyObject *type2); #else #define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) #define __Pyx_TypeCheck2(obj, type1, type2) (PyObject_TypeCheck(obj, (PyTypeObject *)type1) || PyObject_TypeCheck(obj, (PyTypeObject *)type2)) #define __Pyx_PyErr_GivenExceptionMatches(err, type) PyErr_GivenExceptionMatches(err, type) #define __Pyx_PyErr_GivenExceptionMatches2(err, type1, type2) (PyErr_GivenExceptionMatches(err, type1) || PyErr_GivenExceptionMatches(err, type2)) #endif #define __Pyx_PyErr_ExceptionMatches2(err1, err2) __Pyx_PyErr_GivenExceptionMatches2(__Pyx_PyErr_CurrentExceptionType(), err1, err2) #define __Pyx_PyException_Check(obj) __Pyx_TypeCheck(obj, PyExc_Exception) /* CheckBinaryVersion.proto */ static unsigned long __Pyx_get_runtime_version(void); static int __Pyx_check_binary_version(unsigned long ct_version, unsigned long rt_version, int allow_newer); /* FunctionImport.proto */ static int __Pyx_ImportFunction_3_0_11(PyObject *module, const char *funcname, void (**f)(void), const char *sig); /* InitStrings.proto */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); /* #### Code section: module_declarations ### */ static CYTHON_INLINE double __pyx_f_7cpython_7complex_7complex_4real_real(PyComplexObject *__pyx_v_self); /* proto*/ static CYTHON_INLINE double __pyx_f_7cpython_7complex_7complex_4imag_imag(PyComplexObject *__pyx_v_self); /* proto*/ static PyObject *__pyx_f_5pysam_9libctabix_6Parser_parse(struct __pyx_obj_5pysam_9libctabix_Parser *__pyx_v_self, CYTHON_UNUSED char *__pyx_v_buffer, CYTHON_UNUSED int __pyx_v_length); /* proto*/ static PyObject *__pyx_f_5pysam_9libctabix_7asTuple_parse(struct __pyx_obj_5pysam_9libctabix_asTuple *__pyx_v_self, char *__pyx_v_buffer, int __pyx_v_len); /* proto*/ static PyObject *__pyx_f_5pysam_9libctabix_6asGFF3_parse(struct __pyx_obj_5pysam_9libctabix_asGFF3 *__pyx_v_self, char *__pyx_v_buffer, int __pyx_v_len); /* proto*/ static PyObject *__pyx_f_5pysam_9libctabix_5asGTF_parse(struct __pyx_obj_5pysam_9libctabix_asGTF *__pyx_v_self, char *__pyx_v_buffer, int __pyx_v_len); /* proto*/ static PyObject *__pyx_f_5pysam_9libctabix_5asBed_parse(struct __pyx_obj_5pysam_9libctabix_asBed *__pyx_v_self, char *__pyx_v_buffer, int __pyx_v_len); /* proto*/ static PyObject *__pyx_f_5pysam_9libctabix_5asVCF_parse(struct __pyx_obj_5pysam_9libctabix_asVCF *__pyx_v_self, char *__pyx_v_buffer, int __pyx_v_len); /* proto*/ static int __pyx_f_5pysam_9libctabix_13TabixIterator___cnext__(struct __pyx_obj_5pysam_9libctabix_TabixIterator *__pyx_v_self); /* proto*/ static int __pyx_f_5pysam_9libctabix_10GZIterator___cnext__(struct __pyx_obj_5pysam_9libctabix_GZIterator *__pyx_v_self); /* proto*/ static PyObject *__pyx_f_5pysam_9libctabix_19tabix_file_iterator___cnext__(struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *__pyx_v_self); /* proto*/ /* Module declarations from "libc.stdint" */ /* Module declarations from "libc.string" */ /* Module declarations from "libc.stdlib" */ /* Module declarations from "libc.stdio" */ /* Module declarations from "posix.types" */ /* Module declarations from "pysam.libchtslib" */ /* Module declarations from "libc.errno" */ /* Module declarations from "posix.unistd" */ /* Module declarations from "cpython.version" */ /* Module declarations from "__builtin__" */ /* Module declarations from "cpython.type" */ /* Module declarations from "cpython.object" */ /* Module declarations from "cpython.ref" */ /* Module declarations from "cpython.exc" */ /* Module declarations from "cpython.module" */ /* Module declarations from "cpython.mem" */ /* Module declarations from "cpython.tuple" */ /* Module declarations from "cpython.list" */ /* Module declarations from "cpython.sequence" */ /* Module declarations from "cpython.mapping" */ /* Module declarations from "cpython.iterator" */ /* Module declarations from "cpython.number" */ /* Module declarations from "cpython.int" */ /* Module declarations from "__builtin__" */ /* Module declarations from "cpython.bool" */ /* Module declarations from "cpython.long" */ /* Module declarations from "cpython.float" */ /* Module declarations from "__builtin__" */ /* Module declarations from "cpython.complex" */ /* Module declarations from "cpython.string" */ /* Module declarations from "libc.stddef" */ /* Module declarations from "cpython.unicode" */ /* Module declarations from "cpython.pyport" */ /* Module declarations from "cpython.dict" */ /* Module declarations from "cpython.instance" */ /* Module declarations from "cpython.function" */ /* Module declarations from "cpython.method" */ /* Module declarations from "cpython.weakref" */ /* Module declarations from "cpython.getargs" */ /* Module declarations from "cpython.pythread" */ /* Module declarations from "cpython.pystate" */ /* Module declarations from "cpython.cobject" */ /* Module declarations from "cpython.oldbuffer" */ /* Module declarations from "cpython.set" */ /* Module declarations from "cpython.buffer" */ /* Module declarations from "cpython.bytes" */ /* Module declarations from "cpython.pycapsule" */ /* Module declarations from "cpython.contextvars" */ /* Module declarations from "cpython" */ /* Module declarations from "pysam.libctabixproxies" */ /* Module declarations from "cython" */ /* Module declarations from "array" */ /* Module declarations from "cpython.array" */ static CYTHON_INLINE int __pyx_f_7cpython_5array_extend_buffer(arrayobject *, char *, Py_ssize_t); /*proto*/ /* Module declarations from "pysam.libcutils" */ static PyObject *(*__pyx_f_5pysam_9libcutils_charptr_to_str)(char const *, struct __pyx_opt_args_5pysam_9libcutils_charptr_to_str *__pyx_optional_args); /*proto*/ static PyObject *(*__pyx_f_5pysam_9libcutils_force_str)(PyObject *, struct __pyx_opt_args_5pysam_9libcutils_force_str *__pyx_optional_args); /*proto*/ static PyObject *(*__pyx_f_5pysam_9libcutils_force_bytes)(PyObject *, struct __pyx_opt_args_5pysam_9libcutils_force_bytes *__pyx_optional_args); /*proto*/ static PyObject *(*__pyx_f_5pysam_9libcutils_encode_filename)(PyObject *); /*proto*/ static PyObject *(*__pyx_f_5pysam_9libcutils_from_string_and_size)(char const *, size_t); /*proto*/ /* Module declarations from "pysam.libctabix" */ static PyObject *__pyx_f_5pysam_9libctabix___pyx_unpickle_Parser__set_state(struct __pyx_obj_5pysam_9libctabix_Parser *, PyObject *); /*proto*/ static PyObject *__pyx_f_5pysam_9libctabix___pyx_unpickle_asTuple__set_state(struct __pyx_obj_5pysam_9libctabix_asTuple *, PyObject *); /*proto*/ static PyObject *__pyx_f_5pysam_9libctabix___pyx_unpickle_asGFF3__set_state(struct __pyx_obj_5pysam_9libctabix_asGFF3 *, PyObject *); /*proto*/ static PyObject *__pyx_f_5pysam_9libctabix___pyx_unpickle_asGTF__set_state(struct __pyx_obj_5pysam_9libctabix_asGTF *, PyObject *); /*proto*/ static PyObject *__pyx_f_5pysam_9libctabix___pyx_unpickle_asBed__set_state(struct __pyx_obj_5pysam_9libctabix_asBed *, PyObject *); /*proto*/ static PyObject *__pyx_f_5pysam_9libctabix___pyx_unpickle_asVCF__set_state(struct __pyx_obj_5pysam_9libctabix_asVCF *, PyObject *); /*proto*/ /* #### Code section: typeinfo ### */ /* #### Code section: before_global_var ### */ #define __Pyx_MODULE_NAME "pysam.libctabix" extern int __pyx_module_is_main_pysam__libctabix; int __pyx_module_is_main_pysam__libctabix = 0; /* Implementation of "pysam.libctabix" */ /* #### Code section: global_var ### */ static PyObject *__pyx_builtin_NotImplementedError; static PyObject *__pyx_builtin_ValueError; static PyObject *__pyx_builtin_IOError; static PyObject *__pyx_builtin_OSError; static PyObject *__pyx_builtin_TypeError; static PyObject *__pyx_builtin_StopIteration; static PyObject *__pyx_builtin_super; static PyObject *__pyx_builtin_KeyError; static PyObject *__pyx_builtin_AssertionError; static PyObject *__pyx_builtin_MemoryError; /* #### Code section: string_decls ### */ static const char __pyx_k_a[] = "a"; static const char __pyx_k_b[] = "b"; static const char __pyx_k_c[] = "c"; static const char __pyx_k_r[] = "r"; static const char __pyx_k_s[] = "%s"; static const char __pyx_k_fn[] = "fn"; static const char __pyx_k_fp[] = "fp"; static const char __pyx_k_gc[] = "gc"; static const char __pyx_k_gz[] = ".gz"; static const char __pyx_k_os[] = "os"; static const char __pyx_k__16[] = "-"; static const char __pyx_k__39[] = "#"; static const char __pyx_k__42[] = "': "; static const char __pyx_k__43[] = ","; static const char __pyx_k__44[] = "'"; static const char __pyx_k__56[] = "."; static const char __pyx_k__62[] = "*"; static const char __pyx_k__78[] = "?"; static const char __pyx_k_all[] = "__all__"; static const char __pyx_k_bcf[] = "bcf"; static const char __pyx_k_bed[] = "bed"; static const char __pyx_k_cfn[] = "cfn"; static const char __pyx_k_cpy[] = "cpy"; static const char __pyx_k_csi[] = "csi"; static const char __pyx_k_doc[] = "__doc__"; static const char __pyx_k_dup[] = "_dup"; static const char __pyx_k_end[] = "end"; static const char __pyx_k_fmt[] = "fmt"; static const char __pyx_k_gff[] = "gff"; static const char __pyx_k_itr[] = "itr"; static const char __pyx_k_new[] = "__new__"; static const char __pyx_k_s_2[] = "s"; static const char __pyx_k_s_i[] = "%s:%i"; static const char __pyx_k_sam[] = "sam"; static const char __pyx_k_sys[] = "sys"; static const char __pyx_k_tbi[] = ".tbi"; static const char __pyx_k_vcf[] = "vcf"; static const char __pyx_k_conf[] = "conf"; static const char __pyx_k_cstr[] = "cstr"; static const char __pyx_k_dict[] = "__dict__"; static const char __pyx_k_init[] = "__init__"; static const char __pyx_k_iter[] = "__iter__"; static const char __pyx_k_keys[] = "keys"; static const char __pyx_k_line[] = "line"; static const char __pyx_k_main[] = "__main__"; static const char __pyx_k_mode[] = "mode"; static const char __pyx_k_name[] = "__name__"; static const char __pyx_k_next[] = "__next__"; static const char __pyx_k_open[] = "_open"; static const char __pyx_k_path[] = "path"; static const char __pyx_k_self[] = "self"; static const char __pyx_k_spec[] = "__spec__"; static const char __pyx_k_tell[] = "tell"; static const char __pyx_k_test[] = "__test__"; static const char __pyx_k_asBed[] = "asBed"; static const char __pyx_k_asGTF[] = "asGTF"; static const char __pyx_k_asVCF[] = "asVCF"; static const char __pyx_k_ascii[] = "ascii"; static const char __pyx_k_close[] = "close"; static const char __pyx_k_csi_2[] = ".csi"; static const char __pyx_k_fetch[] = "fetch"; static const char __pyx_k_fnidx[] = "fnidx"; static const char __pyx_k_force[] = "force"; static const char __pyx_k_index[] = "index"; static const char __pyx_k_s_i_i[] = "%s:%i-%i"; static const char __pyx_k_start[] = "start"; static const char __pyx_k_state[] = "state"; static const char __pyx_k_super[] = "super"; static const char __pyx_k_Parser[] = "Parser"; static const char __pyx_k_asGFF3[] = "asGFF3"; static const char __pyx_k_buffer[] = "buffer"; static const char __pyx_k_closed[] = "closed"; static const char __pyx_k_dict_2[] = "_dict"; static const char __pyx_k_enable[] = "enable"; static const char __pyx_k_exists[] = "exists"; static const char __pyx_k_fd_src[] = "fd_src"; static const char __pyx_k_format[] = "format"; static const char __pyx_k_import[] = "__import__"; static const char __pyx_k_infile[] = "infile"; static const char __pyx_k_length[] = "length"; static const char __pyx_k_module[] = "__module__"; static const char __pyx_k_nbytes[] = "nbytes"; static const char __pyx_k_parser[] = "parser"; static const char __pyx_k_pickle[] = "pickle"; static const char __pyx_k_preset[] = "preset"; static const char __pyx_k_psltbl[] = "psltbl"; static const char __pyx_k_reduce[] = "__reduce__"; static const char __pyx_k_region[] = "region"; static const char __pyx_k_retval[] = "retval"; static const char __pyx_k_suffix[] = "suffix"; static const char __pyx_k_unlink[] = "unlink"; static const char __pyx_k_update[] = "update"; static const char __pyx_k_IOError[] = "IOError"; static const char __pyx_k_OSError[] = "OSError"; static const char __pyx_k_asTuple[] = "asTuple"; static const char __pyx_k_contigs[] = "contigs"; static const char __pyx_k_disable[] = "disable"; static const char __pyx_k_end_col[] = "end_col"; static const char __pyx_k_fileobj[] = "fileobj"; static const char __pyx_k_is_open[] = "is_open"; static const char __pyx_k_prepare[] = "__prepare__"; static const char __pyx_k_seq_col[] = "seq_col"; static const char __pyx_k_threads[] = "threads"; static const char __pyx_k_KeyError[] = "KeyError"; static const char __pyx_k_O_RDONLY[] = "O_RDONLY"; static const char __pyx_k_encoding[] = "encoding"; static const char __pyx_k_filename[] = "filename"; static const char __pyx_k_fn_index[] = "fn_index"; static const char __pyx_k_getstate[] = "__getstate__"; static const char __pyx_k_is_empty[] = "is_empty"; static const char __pyx_k_pyx_type[] = "__pyx_type"; static const char __pyx_k_qualname[] = "__qualname__"; static const char __pyx_k_readline[] = "readline"; static const char __pyx_k_set_name[] = "__set_name__"; static const char __pyx_k_setstate[] = "__setstate__"; static const char __pyx_k_TabixFile[] = "TabixFile"; static const char __pyx_k_Tabixfile[] = "Tabixfile"; static const char __pyx_k_TypeError[] = "TypeError"; static const char __pyx_k_bytes_cpy[] = "bytes_cpy"; static const char __pyx_k_cfilename[] = "cfilename"; static const char __pyx_k_conf_data[] = "conf_data"; static const char __pyx_k_isenabled[] = "isenabled"; static const char __pyx_k_line_skip[] = "line_skip"; static const char __pyx_k_meta_char[] = "meta_char"; static const char __pyx_k_metaclass[] = "__metaclass__"; static const char __pyx_k_min_shift[] = "min_shift"; static const char __pyx_k_pyx_state[] = "__pyx_state"; static const char __pyx_k_reduce_ex[] = "__reduce_ex__"; static const char __pyx_k_reference[] = "reference"; static const char __pyx_k_start_col[] = "start_col"; static const char __pyx_k_zerobased[] = "zerobased"; static const char __pyx_k_GZIterator[] = "GZIterator"; static const char __pyx_k_ValueError[] = "ValueError"; static const char __pyx_k_pyx_result[] = "__pyx_result"; static const char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; static const char __pyx_k_MemoryError[] = "MemoryError"; static const char __pyx_k_PickleError[] = "PickleError"; static const char __pyx_k_WINDOW_SIZE[] = "WINDOW_SIZE"; static const char __pyx_k_buffer_size[] = "buffer_size"; static const char __pyx_k_filename_in[] = "filename_in"; static const char __pyx_k_preset2conf[] = "preset2conf"; static const char __pyx_k_tabix_index[] = "tabix_index"; static const char __pyx_k_filename_out[] = "filename_out"; static const char __pyx_k_get_encoding[] = "get_encoding"; static const char __pyx_k_initializing[] = "_initializing"; static const char __pyx_k_is_coroutine[] = "_is_coroutine"; static const char __pyx_k_pyx_checksum[] = "__pyx_checksum"; static const char __pyx_k_set_encoding[] = "set_encoding"; static const char __pyx_k_stringsource[] = "<stringsource>"; static const char __pyx_k_use_setstate[] = "use_setstate"; static const char __pyx_k_EmptyIterator[] = "EmptyIterator"; static const char __pyx_k_StopIteration[] = "StopIteration"; static const char __pyx_k_TabixIterator[] = "TabixIterator"; static const char __pyx_k_init_subclass[] = "__init_subclass__"; static const char __pyx_k_keep_original[] = "keep_original"; static const char __pyx_k_reduce_cython[] = "__reduce_cython__"; static const char __pyx_k_start_i_end_i[] = "start (%i) >= end (%i)"; static const char __pyx_k_AssertionError[] = "AssertionError"; static const char __pyx_k_GZIteratorHead[] = "GZIteratorHead"; static const char __pyx_k_TabixFile__dup[] = "TabixFile._dup"; static const char __pyx_k_empty_iterator[] = "empty iterator"; static const char __pyx_k_filename_index[] = "filename_index"; static const char __pyx_k_tabix_compress[] = "tabix_compress"; static const char __pyx_k_tabix_iterator[] = "tabix_iterator"; static const char __pyx_k_unknown_preset[] = "unknown preset '"; static const char __pyx_k_writing_failed[] = "writing failed"; static const char __pyx_k_TabixFile__open[] = "TabixFile._open"; static const char __pyx_k_TabixFile_close[] = "TabixFile.close"; static const char __pyx_k_TabixFile_fetch[] = "TabixFile.fetch"; static const char __pyx_k_cfilename_index[] = "cfilename_index"; static const char __pyx_k_pysam_libctabix[] = "pysam.libctabix"; static const char __pyx_k_pyx_PickleError[] = "__pyx_PickleError"; static const char __pyx_k_setstate_cython[] = "__setstate_cython__"; static const char __pyx_k_GZIteratorParsed[] = "GZIteratorParsed"; static const char __pyx_k_file_s_not_found[] = "file `%s` not found"; static const char __pyx_k_index_s_not_found[] = "index `%s` not found"; static const char __pyx_k_valid_presets_are[] = "', valid presets are '"; static const char __pyx_k_asyncio_coroutines[] = "asyncio.coroutines"; static const char __pyx_k_cline_in_traceback[] = "cline_in_traceback"; static const char __pyx_k_end_out_of_range_i[] = "end out of range (%i)"; static const char __pyx_k_multiple_iterators[] = "multiple_iterators"; static const char __pyx_k_pyx_unpickle_asBed[] = "__pyx_unpickle_asBed"; static const char __pyx_k_pyx_unpickle_asGTF[] = "__pyx_unpickle_asGTF"; static const char __pyx_k_pyx_unpickle_asVCF[] = "__pyx_unpickle_asVCF"; static const char __pyx_k_Could_not_open_file[] = "Could not open file '"; static const char __pyx_k_NotImplementedError[] = "NotImplementedError"; static const char __pyx_k_Parser_get_encoding[] = "Parser.get_encoding"; static const char __pyx_k_Parser_set_encoding[] = "Parser.set_encoding"; static const char __pyx_k_TabixIteratorParsed[] = "TabixIteratorParsed"; static const char __pyx_k_pysam_libctabix_pyx[] = "pysam/libctabix.pyx"; static const char __pyx_k_pyx_unpickle_Parser[] = "__pyx_unpickle_Parser"; static const char __pyx_k_pyx_unpickle_asGFF3[] = "__pyx_unpickle_asGFF3"; static const char __pyx_k_tabix_file_iterator[] = "tabix_file_iterator"; static const char __pyx_k_EmptyIterator___iter[] = "EmptyIterator.__iter__"; static const char __pyx_k_EmptyIterator___next[] = "EmptyIterator.__next__"; static const char __pyx_k_incomplete_line_at_s[] = "incomplete line at %s"; static const char __pyx_k_pyx_unpickle_asTuple[] = "__pyx_unpickle_asTuple"; static const char __pyx_k_start_out_of_range_i[] = "start out of range (%i)"; static const char __pyx_k_asBed___reduce_cython[] = "asBed.__reduce_cython__"; static const char __pyx_k_asGTF___reduce_cython[] = "asGTF.__reduce_cython__"; static const char __pyx_k_asVCF___reduce_cython[] = "asVCF.__reduce_cython__"; static const char __pyx_k_could_not_open_file_s[] = "could not open file `%s`"; static const char __pyx_k_Parser___reduce_cython[] = "Parser.__reduce_cython__"; static const char __pyx_k_asGFF3___reduce_cython[] = "asGFF3.__reduce_cython__"; static const char __pyx_k_tabix_generic_iterator[] = "tabix_generic_iterator"; static const char __pyx_k_asBed___setstate_cython[] = "asBed.__setstate_cython__"; static const char __pyx_k_asGTF___setstate_cython[] = "asGTF.__setstate_cython__"; static const char __pyx_k_asTuple___reduce_cython[] = "asTuple.__reduce_cython__"; static const char __pyx_k_asVCF___setstate_cython[] = "asVCF.__setstate_cython__"; static const char __pyx_k_Parser___setstate_cython[] = "Parser.__setstate_cython__"; static const char __pyx_k_asGFF3___setstate_cython[] = "asGFF3.__setstate_cython__"; static const char __pyx_k_iteration_on_closed_file[] = "iteration on closed file"; static const char __pyx_k_TabixFile___reduce_cython[] = "TabixFile.__reduce_cython__"; static const char __pyx_k_Tabixfile___reduce_cython[] = "Tabixfile.__reduce_cython__"; static const char __pyx_k_asTuple___setstate_cython[] = "asTuple.__setstate_cython__"; static const char __pyx_k_GZIterator___reduce_cython[] = "GZIterator.__reduce_cython__"; static const char __pyx_k_could_not_open_index_for_s[] = "could not open index for `%s`"; static const char __pyx_k_No_such_file_or_directory_s[] = "No such file or directory: %s"; static const char __pyx_k_TabixFile___setstate_cython[] = "TabixFile.__setstate_cython__"; static const char __pyx_k_Tabixfile___setstate_cython[] = "Tabixfile.__setstate_cython__"; static const char __pyx_k_error_i_when_closing_file_s[] = "error %i when closing file %s"; static const char __pyx_k_invalid_file_opening_mode_s[] = "invalid file opening mode `%s`"; static const char __pyx_k_GZIterator___setstate_cython[] = "GZIterator.__setstate_cython__"; static const char __pyx_k_I_O_operation_on_closed_file[] = "I/O operation on closed file"; static const char __pyx_k_building_of_index_for_failed[] = "building of index for {} failed"; static const char __pyx_k_could_not_open_s_for_reading[] = "could not open '%s' for reading"; static const char __pyx_k_could_not_open_s_for_writing[] = "could not open '%s' for writing"; static const char __pyx_k_TabixIterator___reduce_cython[] = "TabixIterator.__reduce_cython__"; static const char __pyx_k_tabix_generic_iterator___init[] = "tabix_generic_iterator.__init__"; static const char __pyx_k_tabix_generic_iterator___iter[] = "tabix_generic_iterator.__iter__"; static const char __pyx_k_tabix_generic_iterator___next[] = "tabix_generic_iterator.__next__"; static const char __pyx_k_GZIteratorHead___reduce_cython[] = "GZIteratorHead.__reduce_cython__"; static const char __pyx_k_I_O_operation_on_closed_file_2[] = "I/O operation on closed file."; static const char __pyx_k_error_i_when_writing_to_file_s[] = "error %i when writing to file %s"; static const char __pyx_k_TabixIterator___setstate_cython[] = "TabixIterator.__setstate_cython__"; static const char __pyx_k_could_not_load_tbi_csi_index_of[] = "could not load .tbi/.csi index of {}"; static const char __pyx_k_iterate_over_infile_Permits_the[] = "iterate over ``infile``.\n \n Permits the use of file-like objects for example from the gzip module.\n "; static const char __pyx_k_Filename_s_already_exists_use_fo[] = "Filename '%s' already exists, use *force* to overwrite"; static const char __pyx_k_GZIteratorHead___setstate_cython[] = "GZIteratorHead.__setstate_cython__"; static const char __pyx_k_GZIteratorParsed___reduce_cython[] = "GZIteratorParsed.__reduce_cython__"; static const char __pyx_k_GZIteratorParsed___setstate_cyth[] = "GZIteratorParsed.__setstate_cython__"; static const char __pyx_k_Incompatible_checksums_0x_x_vs_0[] = "Incompatible checksums (0x%x vs (0xe8424ea, 0x14a9dc0, 0x84bea1f) = (encoding))"; static const char __pyx_k_TabixIteratorParsed___reduce_cyt[] = "TabixIteratorParsed.__reduce_cython__"; static const char __pyx_k_TabixIteratorParsed___setstate_c[] = "TabixIteratorParsed.__setstate_cython__"; static const char __pyx_k_could_not_create_iterator_for_re[] = "could not create iterator for region '%s'"; static const char __pyx_k_could_not_create_iterator_possib[] = "could not create iterator, possible tabix version mismatch"; static const char __pyx_k_could_not_open_for_reading_heade[] = "could not open {} for reading header"; static const char __pyx_k_filename_s_already_exists_use_fo[] = "filename '%s' already exists, use *force* to overwrite"; static const char __pyx_k_neither_preset_nor_seq_col_start[] = "neither preset nor seq_col,start_col and end_col given"; static const char __pyx_k_no_default___reduce___due_to_non[] = "no default __reduce__ due to non-trivial __cinit__"; static const char __pyx_k_parse_method_of_s_not_implemente[] = "parse method of %s not implemented"; static const char __pyx_k_self_gzipfile_self_kstream_canno[] = "self.gzipfile,self.kstream cannot be converted to a Python object for pickling"; static const char __pyx_k_self_iterator_cannot_be_converte[] = "self.iterator cannot be converted to a Python object for pickling"; static const char __pyx_k_tabix_file_iterator___reduce_cyt[] = "tabix_file_iterator.__reduce_cython__"; static const char __pyx_k_tabix_file_iterator___setstate_c[] = "tabix_file_iterator.__setstate_cython__"; /* #### Code section: decls ### */ static int __pyx_pf_7cpython_5array_5array___getbuffer__(arrayobject *__pyx_v_self, Py_buffer *__pyx_v_info, CYTHON_UNUSED int __pyx_v_flags); /* proto */ static void __pyx_pf_7cpython_5array_5array_2__releasebuffer__(CYTHON_UNUSED arrayobject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */ static int __pyx_pf_5pysam_9libctabix_6Parser___init__(struct __pyx_obj_5pysam_9libctabix_Parser *__pyx_v_self, PyObject *__pyx_v_encoding); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_6Parser_2set_encoding(struct __pyx_obj_5pysam_9libctabix_Parser *__pyx_v_self, PyObject *__pyx_v_encoding); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_6Parser_4get_encoding(struct __pyx_obj_5pysam_9libctabix_Parser *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_6Parser_6__call__(struct __pyx_obj_5pysam_9libctabix_Parser *__pyx_v_self, char *__pyx_v_buffer, int __pyx_v_length); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_6Parser_8__reduce_cython__(struct __pyx_obj_5pysam_9libctabix_Parser *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_6Parser_10__setstate_cython__(struct __pyx_obj_5pysam_9libctabix_Parser *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_7asTuple___reduce_cython__(struct __pyx_obj_5pysam_9libctabix_asTuple *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_7asTuple_2__setstate_cython__(struct __pyx_obj_5pysam_9libctabix_asTuple *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_6asGFF3___reduce_cython__(struct __pyx_obj_5pysam_9libctabix_asGFF3 *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_6asGFF3_2__setstate_cython__(struct __pyx_obj_5pysam_9libctabix_asGFF3 *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_5asGTF___reduce_cython__(struct __pyx_obj_5pysam_9libctabix_asGTF *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_5asGTF_2__setstate_cython__(struct __pyx_obj_5pysam_9libctabix_asGTF *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_5asBed___reduce_cython__(struct __pyx_obj_5pysam_9libctabix_asBed *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_5asBed_2__setstate_cython__(struct __pyx_obj_5pysam_9libctabix_asBed *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_5asVCF___reduce_cython__(struct __pyx_obj_5pysam_9libctabix_asVCF *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_5asVCF_2__setstate_cython__(struct __pyx_obj_5pysam_9libctabix_asVCF *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ static int __pyx_pf_5pysam_9libctabix_9TabixFile___cinit__(struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self, PyObject *__pyx_v_filename, PyObject *__pyx_v_mode, PyObject *__pyx_v_parser, PyObject *__pyx_v_index, PyObject *__pyx_v_encoding, PyObject *__pyx_v_threads, PyObject *__pyx_v_args, PyObject *__pyx_v_kwargs); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9TabixFile_2_open(struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self, PyObject *__pyx_v_filename, PyObject *__pyx_v_mode, PyObject *__pyx_v_index, PyObject *__pyx_v_threads); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9TabixFile_4_dup(struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9TabixFile_6fetch(struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self, PyObject *__pyx_v_reference, PyObject *__pyx_v_start, PyObject *__pyx_v_end, PyObject *__pyx_v_region, PyObject *__pyx_v_parser, PyObject *__pyx_v_multiple_iterators); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9TabixFile_6header___get__(struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9TabixFile_7contigs___get__(struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9TabixFile_8close(struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self); /* proto */ static void __pyx_pf_5pysam_9libctabix_9TabixFile_10__dealloc__(struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9TabixFile_14filename_index___get__(struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9TabixFile_12__reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9TabixFile_14__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_TabixFile *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static int __pyx_pf_5pysam_9libctabix_13TabixIterator___init__(struct __pyx_obj_5pysam_9libctabix_TabixIterator *__pyx_v_self, PyObject *__pyx_v_encoding); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_13TabixIterator_2__iter__(struct __pyx_obj_5pysam_9libctabix_TabixIterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_13TabixIterator_4__next__(struct __pyx_obj_5pysam_9libctabix_TabixIterator *__pyx_v_self); /* proto */ static void __pyx_pf_5pysam_9libctabix_13TabixIterator_6__dealloc__(struct __pyx_obj_5pysam_9libctabix_TabixIterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_13TabixIterator_8__reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_TabixIterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_13TabixIterator_10__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_TabixIterator *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_13EmptyIterator___iter__(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_13EmptyIterator_2__next__(CYTHON_UNUSED PyObject *__pyx_self, CYTHON_UNUSED PyObject *__pyx_v_self); /* proto */ static int __pyx_pf_5pysam_9libctabix_19TabixIteratorParsed___init__(struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *__pyx_v_self, struct __pyx_obj_5pysam_9libctabix_Parser *__pyx_v_parser); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_19TabixIteratorParsed_2__next__(struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_19TabixIteratorParsed_4__reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_19TabixIteratorParsed_6__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static int __pyx_pf_5pysam_9libctabix_10GZIterator___init__(struct __pyx_obj_5pysam_9libctabix_GZIterator *__pyx_v_self, PyObject *__pyx_v_filename, int __pyx_v_buffer_size, PyObject *__pyx_v_encoding); /* proto */ static void __pyx_pf_5pysam_9libctabix_10GZIterator_2__dealloc__(struct __pyx_obj_5pysam_9libctabix_GZIterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_10GZIterator_4__iter__(struct __pyx_obj_5pysam_9libctabix_GZIterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_10GZIterator_6__next__(struct __pyx_obj_5pysam_9libctabix_GZIterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_10GZIterator_8__reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_GZIterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_10GZIterator_10__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_GZIterator *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_14GZIteratorHead___next__(struct __pyx_obj_5pysam_9libctabix_GZIteratorHead *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_14GZIteratorHead_2__reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_GZIteratorHead *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_14GZIteratorHead_4__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_GZIteratorHead *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static int __pyx_pf_5pysam_9libctabix_16GZIteratorParsed___init__(struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *__pyx_v_self, PyObject *__pyx_v_parser); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_16GZIteratorParsed_2__next__(struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_16GZIteratorParsed_4__reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_16GZIteratorParsed_6__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_tabix_compress(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_filename_in, PyObject *__pyx_v_filename_out, PyObject *__pyx_v_force); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_2tabix_index(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_filename, PyObject *__pyx_v_force, PyObject *__pyx_v_seq_col, PyObject *__pyx_v_start_col, PyObject *__pyx_v_end_col, PyObject *__pyx_v_preset, PyObject *__pyx_v_meta_char, int __pyx_v_line_skip, PyObject *__pyx_v_zerobased, int __pyx_v_min_shift, PyObject *__pyx_v_index, PyObject *__pyx_v_keep_original, PyObject *__pyx_v_csi); /* proto */ static int __pyx_pf_5pysam_9libctabix_19tabix_file_iterator___cinit__(struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *__pyx_v_self, PyObject *__pyx_v_infile, struct __pyx_obj_5pysam_9libctabix_Parser *__pyx_v_parser, int __pyx_v_buffer_size); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_19tabix_file_iterator_2__iter__(struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *__pyx_v_self); /* proto */ static void __pyx_pf_5pysam_9libctabix_19tabix_file_iterator_4__dealloc__(struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_19tabix_file_iterator_6__next__(struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_19tabix_file_iterator_8__reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_19tabix_file_iterator_10__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_22tabix_generic_iterator___init__(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_self, PyObject *__pyx_v_infile, PyObject *__pyx_v_parser); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_22tabix_generic_iterator_2__iter__(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_22tabix_generic_iterator_4__next__(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_4tabix_iterator(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v_infile, PyObject *__pyx_v_parser); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9Tabixfile___reduce_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_Tabixfile *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_9Tabixfile_2__setstate_cython__(CYTHON_UNUSED struct __pyx_obj_5pysam_9libctabix_Tabixfile *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_6__pyx_unpickle_Parser(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_8__pyx_unpickle_asTuple(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_10__pyx_unpickle_asGFF3(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_12__pyx_unpickle_asGTF(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_14__pyx_unpickle_asBed(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_pf_5pysam_9libctabix_16__pyx_unpickle_asVCF(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_tp_new_5pysam_9libctabix_tabix_file_iterator(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_TabixFile(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_Parser(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_asTuple(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_asGTF(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_asGFF3(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_asBed(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_asVCF(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_TabixIterator(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_TabixIteratorParsed(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_GZIterator(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_GZIteratorHead(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_GZIteratorParsed(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_5pysam_9libctabix_Tabixfile(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static __Pyx_CachedCFunction __pyx_umethod_PyDict_Type_keys = {0, 0, 0, 0, 0}; /* #### Code section: late_includes ### */ /* #### Code section: module_state ### */ typedef struct { PyObject *__pyx_d; PyObject *__pyx_b; PyObject *__pyx_cython_runtime; PyObject *__pyx_empty_tuple; PyObject *__pyx_empty_bytes; PyObject *__pyx_empty_unicode; #ifdef __Pyx_CyFunction_USED PyTypeObject *__pyx_CyFunctionType; #endif #ifdef __Pyx_FusedFunction_USED PyTypeObject *__pyx_FusedFunctionType; #endif #ifdef __Pyx_Generator_USED PyTypeObject *__pyx_GeneratorType; #endif #ifdef __Pyx_IterableCoroutine_USED PyTypeObject *__pyx_IterableCoroutineType; #endif #ifdef __Pyx_Coroutine_USED PyTypeObject *__pyx_CoroutineAwaitType; #endif #ifdef __Pyx_Coroutine_USED PyTypeObject *__pyx_CoroutineType; #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif PyTypeObject *__pyx_ptype_5pysam_10libchtslib_HTSFile; #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif PyTypeObject *__pyx_ptype_7cpython_4type_type; #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif PyTypeObject *__pyx_ptype_7cpython_4bool_bool; #if CYTHON_USE_MODULE_STATE #endif #if 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Py_CLEAR(clear_module_state->__pyx_ptype_5pysam_9libctabix_GZIteratorParsed); Py_CLEAR(clear_module_state->__pyx_type_5pysam_9libctabix_GZIteratorParsed); Py_CLEAR(clear_module_state->__pyx_ptype_5pysam_9libctabix_Tabixfile); Py_CLEAR(clear_module_state->__pyx_type_5pysam_9libctabix_Tabixfile); Py_CLEAR(clear_module_state->__pyx_n_s_AssertionError); Py_CLEAR(clear_module_state->__pyx_kp_u_Could_not_open_file); Py_CLEAR(clear_module_state->__pyx_n_s_EmptyIterator); Py_CLEAR(clear_module_state->__pyx_n_s_EmptyIterator___iter); Py_CLEAR(clear_module_state->__pyx_n_s_EmptyIterator___next); Py_CLEAR(clear_module_state->__pyx_kp_u_Filename_s_already_exists_use_fo); Py_CLEAR(clear_module_state->__pyx_n_s_GZIterator); Py_CLEAR(clear_module_state->__pyx_n_u_GZIterator); Py_CLEAR(clear_module_state->__pyx_n_s_GZIteratorHead); Py_CLEAR(clear_module_state->__pyx_n_u_GZIteratorHead); Py_CLEAR(clear_module_state->__pyx_n_s_GZIteratorHead___reduce_cython); 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Py_CLEAR(clear_module_state->__pyx_n_s_O_RDONLY); Py_CLEAR(clear_module_state->__pyx_n_s_Parser); Py_CLEAR(clear_module_state->__pyx_n_s_Parser___reduce_cython); Py_CLEAR(clear_module_state->__pyx_n_s_Parser___setstate_cython); Py_CLEAR(clear_module_state->__pyx_n_s_Parser_get_encoding); Py_CLEAR(clear_module_state->__pyx_n_s_Parser_set_encoding); Py_CLEAR(clear_module_state->__pyx_n_s_PickleError); Py_CLEAR(clear_module_state->__pyx_n_s_StopIteration); Py_CLEAR(clear_module_state->__pyx_n_s_TabixFile); Py_CLEAR(clear_module_state->__pyx_n_u_TabixFile); Py_CLEAR(clear_module_state->__pyx_n_s_TabixFile___reduce_cython); Py_CLEAR(clear_module_state->__pyx_n_s_TabixFile___setstate_cython); Py_CLEAR(clear_module_state->__pyx_n_s_TabixFile__dup); Py_CLEAR(clear_module_state->__pyx_n_s_TabixFile__open); Py_CLEAR(clear_module_state->__pyx_n_s_TabixFile_close); Py_CLEAR(clear_module_state->__pyx_n_s_TabixFile_fetch); Py_CLEAR(clear_module_state->__pyx_n_s_TabixIterator); Py_CLEAR(clear_module_state->__pyx_n_s_TabixIteratorParsed); Py_CLEAR(clear_module_state->__pyx_n_s_TabixIteratorParsed___reduce_cyt); Py_CLEAR(clear_module_state->__pyx_n_s_TabixIteratorParsed___setstate_c); Py_CLEAR(clear_module_state->__pyx_n_s_TabixIterator___reduce_cython); Py_CLEAR(clear_module_state->__pyx_n_s_TabixIterator___setstate_cython); Py_CLEAR(clear_module_state->__pyx_n_s_Tabixfile); Py_CLEAR(clear_module_state->__pyx_n_u_Tabixfile); Py_CLEAR(clear_module_state->__pyx_n_s_Tabixfile___reduce_cython); Py_CLEAR(clear_module_state->__pyx_n_s_Tabixfile___setstate_cython); Py_CLEAR(clear_module_state->__pyx_n_s_TypeError); Py_CLEAR(clear_module_state->__pyx_n_s_ValueError); Py_CLEAR(clear_module_state->__pyx_n_s_WINDOW_SIZE); Py_CLEAR(clear_module_state->__pyx_kp_b__16); Py_CLEAR(clear_module_state->__pyx_kp_u__39); Py_CLEAR(clear_module_state->__pyx_kp_u__42); Py_CLEAR(clear_module_state->__pyx_kp_u__43); Py_CLEAR(clear_module_state->__pyx_kp_u__44); Py_CLEAR(clear_module_state->__pyx_kp_u__56); Py_CLEAR(clear_module_state->__pyx_n_s__62); Py_CLEAR(clear_module_state->__pyx_n_s__78); Py_CLEAR(clear_module_state->__pyx_n_s_a); Py_CLEAR(clear_module_state->__pyx_n_s_all); Py_CLEAR(clear_module_state->__pyx_n_s_asBed); Py_CLEAR(clear_module_state->__pyx_n_u_asBed); Py_CLEAR(clear_module_state->__pyx_n_s_asBed___reduce_cython); Py_CLEAR(clear_module_state->__pyx_n_s_asBed___setstate_cython); Py_CLEAR(clear_module_state->__pyx_n_s_asGFF3); Py_CLEAR(clear_module_state->__pyx_n_u_asGFF3); Py_CLEAR(clear_module_state->__pyx_n_s_asGFF3___reduce_cython); Py_CLEAR(clear_module_state->__pyx_n_s_asGFF3___setstate_cython); Py_CLEAR(clear_module_state->__pyx_n_s_asGTF); Py_CLEAR(clear_module_state->__pyx_n_u_asGTF); Py_CLEAR(clear_module_state->__pyx_n_s_asGTF___reduce_cython); Py_CLEAR(clear_module_state->__pyx_n_s_asGTF___setstate_cython); Py_CLEAR(clear_module_state->__pyx_n_s_asTuple); Py_CLEAR(clear_module_state->__pyx_n_u_asTuple); 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CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #define __pyx_ptype_7cpython_4bool_bool __pyx_mstate_global->__pyx_ptype_7cpython_4bool_bool #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #define __pyx_ptype_7cpython_7complex_complex __pyx_mstate_global->__pyx_ptype_7cpython_7complex_complex #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #define __pyx_ptype_5pysam_16libctabixproxies_TupleProxy __pyx_mstate_global->__pyx_ptype_5pysam_16libctabixproxies_TupleProxy #define __pyx_ptype_5pysam_16libctabixproxies_TupleProxyIterator __pyx_mstate_global->__pyx_ptype_5pysam_16libctabixproxies_TupleProxyIterator #define __pyx_ptype_5pysam_16libctabixproxies_NamedTupleProxy __pyx_mstate_global->__pyx_ptype_5pysam_16libctabixproxies_NamedTupleProxy #define __pyx_ptype_5pysam_16libctabixproxies_GTFProxy __pyx_mstate_global->__pyx_ptype_5pysam_16libctabixproxies_GTFProxy #define __pyx_ptype_5pysam_16libctabixproxies_GFF3Proxy __pyx_mstate_global->__pyx_ptype_5pysam_16libctabixproxies_GFF3Proxy #define __pyx_ptype_5pysam_16libctabixproxies_BedProxy __pyx_mstate_global->__pyx_ptype_5pysam_16libctabixproxies_BedProxy #define __pyx_ptype_5pysam_16libctabixproxies_VCFProxy __pyx_mstate_global->__pyx_ptype_5pysam_16libctabixproxies_VCFProxy #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #endif #define __pyx_ptype_7cpython_5array_array __pyx_mstate_global->__pyx_ptype_7cpython_5array_array #if CYTHON_USE_MODULE_STATE #endif #if CYTHON_USE_MODULE_STATE #define __pyx_type_5pysam_9libctabix_tabix_file_iterator __pyx_mstate_global->__pyx_type_5pysam_9libctabix_tabix_file_iterator #define __pyx_type_5pysam_9libctabix_TabixFile __pyx_mstate_global->__pyx_type_5pysam_9libctabix_TabixFile #define __pyx_type_5pysam_9libctabix_Parser __pyx_mstate_global->__pyx_type_5pysam_9libctabix_Parser #define __pyx_type_5pysam_9libctabix_asTuple __pyx_mstate_global->__pyx_type_5pysam_9libctabix_asTuple #define __pyx_type_5pysam_9libctabix_asGTF __pyx_mstate_global->__pyx_type_5pysam_9libctabix_asGTF #define __pyx_type_5pysam_9libctabix_asGFF3 __pyx_mstate_global->__pyx_type_5pysam_9libctabix_asGFF3 #define __pyx_type_5pysam_9libctabix_asBed __pyx_mstate_global->__pyx_type_5pysam_9libctabix_asBed #define __pyx_type_5pysam_9libctabix_asVCF __pyx_mstate_global->__pyx_type_5pysam_9libctabix_asVCF #define __pyx_type_5pysam_9libctabix_TabixIterator __pyx_mstate_global->__pyx_type_5pysam_9libctabix_TabixIterator #define __pyx_type_5pysam_9libctabix_TabixIteratorParsed __pyx_mstate_global->__pyx_type_5pysam_9libctabix_TabixIteratorParsed #define __pyx_type_5pysam_9libctabix_GZIterator __pyx_mstate_global->__pyx_type_5pysam_9libctabix_GZIterator #define __pyx_type_5pysam_9libctabix_GZIteratorHead __pyx_mstate_global->__pyx_type_5pysam_9libctabix_GZIteratorHead #define __pyx_type_5pysam_9libctabix_GZIteratorParsed __pyx_mstate_global->__pyx_type_5pysam_9libctabix_GZIteratorParsed #define __pyx_type_5pysam_9libctabix_Tabixfile __pyx_mstate_global->__pyx_type_5pysam_9libctabix_Tabixfile #endif #define __pyx_ptype_5pysam_9libctabix_tabix_file_iterator __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_tabix_file_iterator #define __pyx_ptype_5pysam_9libctabix_TabixFile __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_TabixFile #define __pyx_ptype_5pysam_9libctabix_Parser __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_Parser #define __pyx_ptype_5pysam_9libctabix_asTuple __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_asTuple #define __pyx_ptype_5pysam_9libctabix_asGTF __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_asGTF #define __pyx_ptype_5pysam_9libctabix_asGFF3 __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_asGFF3 #define __pyx_ptype_5pysam_9libctabix_asBed __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_asBed #define __pyx_ptype_5pysam_9libctabix_asVCF __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_asVCF #define __pyx_ptype_5pysam_9libctabix_TabixIterator __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_TabixIterator #define __pyx_ptype_5pysam_9libctabix_TabixIteratorParsed __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_TabixIteratorParsed #define __pyx_ptype_5pysam_9libctabix_GZIterator __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_GZIterator #define __pyx_ptype_5pysam_9libctabix_GZIteratorHead __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_GZIteratorHead #define __pyx_ptype_5pysam_9libctabix_GZIteratorParsed __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_GZIteratorParsed #define __pyx_ptype_5pysam_9libctabix_Tabixfile __pyx_mstate_global->__pyx_ptype_5pysam_9libctabix_Tabixfile #define __pyx_n_s_AssertionError __pyx_mstate_global->__pyx_n_s_AssertionError #define __pyx_kp_u_Could_not_open_file __pyx_mstate_global->__pyx_kp_u_Could_not_open_file #define __pyx_n_s_EmptyIterator __pyx_mstate_global->__pyx_n_s_EmptyIterator #define __pyx_n_s_EmptyIterator___iter __pyx_mstate_global->__pyx_n_s_EmptyIterator___iter #define __pyx_n_s_EmptyIterator___next __pyx_mstate_global->__pyx_n_s_EmptyIterator___next #define __pyx_kp_u_Filename_s_already_exists_use_fo __pyx_mstate_global->__pyx_kp_u_Filename_s_already_exists_use_fo #define __pyx_n_s_GZIterator __pyx_mstate_global->__pyx_n_s_GZIterator #define __pyx_n_u_GZIterator __pyx_mstate_global->__pyx_n_u_GZIterator #define __pyx_n_s_GZIteratorHead __pyx_mstate_global->__pyx_n_s_GZIteratorHead #define __pyx_n_u_GZIteratorHead __pyx_mstate_global->__pyx_n_u_GZIteratorHead #define __pyx_n_s_GZIteratorHead___reduce_cython __pyx_mstate_global->__pyx_n_s_GZIteratorHead___reduce_cython #define __pyx_n_s_GZIteratorHead___setstate_cython __pyx_mstate_global->__pyx_n_s_GZIteratorHead___setstate_cython #define __pyx_n_s_GZIteratorParsed __pyx_mstate_global->__pyx_n_s_GZIteratorParsed #define __pyx_n_s_GZIteratorParsed___reduce_cython __pyx_mstate_global->__pyx_n_s_GZIteratorParsed___reduce_cython #define __pyx_n_s_GZIteratorParsed___setstate_cyth __pyx_mstate_global->__pyx_n_s_GZIteratorParsed___setstate_cyth #define __pyx_n_s_GZIterator___reduce_cython __pyx_mstate_global->__pyx_n_s_GZIterator___reduce_cython #define __pyx_n_s_GZIterator___setstate_cython __pyx_mstate_global->__pyx_n_s_GZIterator___setstate_cython #define __pyx_n_s_IOError __pyx_mstate_global->__pyx_n_s_IOError #define __pyx_kp_u_I_O_operation_on_closed_file __pyx_mstate_global->__pyx_kp_u_I_O_operation_on_closed_file #define __pyx_kp_u_I_O_operation_on_closed_file_2 __pyx_mstate_global->__pyx_kp_u_I_O_operation_on_closed_file_2 #define __pyx_kp_s_Incompatible_checksums_0x_x_vs_0 __pyx_mstate_global->__pyx_kp_s_Incompatible_checksums_0x_x_vs_0 #define __pyx_n_s_KeyError __pyx_mstate_global->__pyx_n_s_KeyError #define __pyx_n_s_MemoryError __pyx_mstate_global->__pyx_n_s_MemoryError #define __pyx_kp_u_No_such_file_or_directory_s __pyx_mstate_global->__pyx_kp_u_No_such_file_or_directory_s #define __pyx_n_s_NotImplementedError __pyx_mstate_global->__pyx_n_s_NotImplementedError #define __pyx_n_s_OSError __pyx_mstate_global->__pyx_n_s_OSError #define __pyx_n_s_O_RDONLY __pyx_mstate_global->__pyx_n_s_O_RDONLY #define __pyx_n_s_Parser __pyx_mstate_global->__pyx_n_s_Parser #define __pyx_n_s_Parser___reduce_cython __pyx_mstate_global->__pyx_n_s_Parser___reduce_cython #define __pyx_n_s_Parser___setstate_cython __pyx_mstate_global->__pyx_n_s_Parser___setstate_cython #define __pyx_n_s_Parser_get_encoding __pyx_mstate_global->__pyx_n_s_Parser_get_encoding #define __pyx_n_s_Parser_set_encoding __pyx_mstate_global->__pyx_n_s_Parser_set_encoding #define __pyx_n_s_PickleError __pyx_mstate_global->__pyx_n_s_PickleError #define __pyx_n_s_StopIteration __pyx_mstate_global->__pyx_n_s_StopIteration #define __pyx_n_s_TabixFile __pyx_mstate_global->__pyx_n_s_TabixFile #define __pyx_n_u_TabixFile __pyx_mstate_global->__pyx_n_u_TabixFile #define __pyx_n_s_TabixFile___reduce_cython __pyx_mstate_global->__pyx_n_s_TabixFile___reduce_cython #define __pyx_n_s_TabixFile___setstate_cython __pyx_mstate_global->__pyx_n_s_TabixFile___setstate_cython #define __pyx_n_s_TabixFile__dup __pyx_mstate_global->__pyx_n_s_TabixFile__dup #define __pyx_n_s_TabixFile__open __pyx_mstate_global->__pyx_n_s_TabixFile__open #define __pyx_n_s_TabixFile_close __pyx_mstate_global->__pyx_n_s_TabixFile_close #define __pyx_n_s_TabixFile_fetch __pyx_mstate_global->__pyx_n_s_TabixFile_fetch #define __pyx_n_s_TabixIterator __pyx_mstate_global->__pyx_n_s_TabixIterator #define __pyx_n_s_TabixIteratorParsed __pyx_mstate_global->__pyx_n_s_TabixIteratorParsed #define __pyx_n_s_TabixIteratorParsed___reduce_cyt __pyx_mstate_global->__pyx_n_s_TabixIteratorParsed___reduce_cyt #define __pyx_n_s_TabixIteratorParsed___setstate_c __pyx_mstate_global->__pyx_n_s_TabixIteratorParsed___setstate_c #define __pyx_n_s_TabixIterator___reduce_cython __pyx_mstate_global->__pyx_n_s_TabixIterator___reduce_cython #define __pyx_n_s_TabixIterator___setstate_cython __pyx_mstate_global->__pyx_n_s_TabixIterator___setstate_cython #define __pyx_n_s_Tabixfile __pyx_mstate_global->__pyx_n_s_Tabixfile #define __pyx_n_u_Tabixfile __pyx_mstate_global->__pyx_n_u_Tabixfile #define __pyx_n_s_Tabixfile___reduce_cython __pyx_mstate_global->__pyx_n_s_Tabixfile___reduce_cython #define __pyx_n_s_Tabixfile___setstate_cython __pyx_mstate_global->__pyx_n_s_Tabixfile___setstate_cython #define __pyx_n_s_TypeError __pyx_mstate_global->__pyx_n_s_TypeError #define __pyx_n_s_ValueError __pyx_mstate_global->__pyx_n_s_ValueError #define __pyx_n_s_WINDOW_SIZE __pyx_mstate_global->__pyx_n_s_WINDOW_SIZE #define __pyx_kp_b__16 __pyx_mstate_global->__pyx_kp_b__16 #define __pyx_kp_u__39 __pyx_mstate_global->__pyx_kp_u__39 #define __pyx_kp_u__42 __pyx_mstate_global->__pyx_kp_u__42 #define __pyx_kp_u__43 __pyx_mstate_global->__pyx_kp_u__43 #define __pyx_kp_u__44 __pyx_mstate_global->__pyx_kp_u__44 #define __pyx_kp_u__56 __pyx_mstate_global->__pyx_kp_u__56 #define __pyx_n_s__62 __pyx_mstate_global->__pyx_n_s__62 #define __pyx_n_s__78 __pyx_mstate_global->__pyx_n_s__78 #define __pyx_n_s_a __pyx_mstate_global->__pyx_n_s_a #define __pyx_n_s_all __pyx_mstate_global->__pyx_n_s_all #define __pyx_n_s_asBed __pyx_mstate_global->__pyx_n_s_asBed #define __pyx_n_u_asBed __pyx_mstate_global->__pyx_n_u_asBed #define __pyx_n_s_asBed___reduce_cython __pyx_mstate_global->__pyx_n_s_asBed___reduce_cython #define __pyx_n_s_asBed___setstate_cython __pyx_mstate_global->__pyx_n_s_asBed___setstate_cython #define __pyx_n_s_asGFF3 __pyx_mstate_global->__pyx_n_s_asGFF3 #define __pyx_n_u_asGFF3 __pyx_mstate_global->__pyx_n_u_asGFF3 #define __pyx_n_s_asGFF3___reduce_cython __pyx_mstate_global->__pyx_n_s_asGFF3___reduce_cython #define __pyx_n_s_asGFF3___setstate_cython __pyx_mstate_global->__pyx_n_s_asGFF3___setstate_cython #define __pyx_n_s_asGTF __pyx_mstate_global->__pyx_n_s_asGTF #define __pyx_n_u_asGTF __pyx_mstate_global->__pyx_n_u_asGTF #define __pyx_n_s_asGTF___reduce_cython __pyx_mstate_global->__pyx_n_s_asGTF___reduce_cython #define __pyx_n_s_asGTF___setstate_cython __pyx_mstate_global->__pyx_n_s_asGTF___setstate_cython #define __pyx_n_s_asTuple __pyx_mstate_global->__pyx_n_s_asTuple #define __pyx_n_u_asTuple __pyx_mstate_global->__pyx_n_u_asTuple #define __pyx_n_s_asTuple___reduce_cython __pyx_mstate_global->__pyx_n_s_asTuple___reduce_cython #define __pyx_n_s_asTuple___setstate_cython __pyx_mstate_global->__pyx_n_s_asTuple___setstate_cython #define __pyx_n_s_asVCF __pyx_mstate_global->__pyx_n_s_asVCF #define __pyx_n_u_asVCF __pyx_mstate_global->__pyx_n_u_asVCF #define __pyx_n_s_asVCF___reduce_cython __pyx_mstate_global->__pyx_n_s_asVCF___reduce_cython #define __pyx_n_s_asVCF___setstate_cython __pyx_mstate_global->__pyx_n_s_asVCF___setstate_cython #define __pyx_n_u_ascii __pyx_mstate_global->__pyx_n_u_ascii #define __pyx_n_s_asyncio_coroutines __pyx_mstate_global->__pyx_n_s_asyncio_coroutines #define __pyx_n_s_b __pyx_mstate_global->__pyx_n_s_b #define __pyx_n_u_bcf __pyx_mstate_global->__pyx_n_u_bcf #define __pyx_n_u_bed __pyx_mstate_global->__pyx_n_u_bed #define __pyx_n_s_buffer __pyx_mstate_global->__pyx_n_s_buffer #define __pyx_n_s_buffer_size __pyx_mstate_global->__pyx_n_s_buffer_size #define __pyx_kp_u_building_of_index_for_failed __pyx_mstate_global->__pyx_kp_u_building_of_index_for_failed #define __pyx_n_s_bytes_cpy __pyx_mstate_global->__pyx_n_s_bytes_cpy #define __pyx_n_s_c __pyx_mstate_global->__pyx_n_s_c #define __pyx_n_s_cfilename __pyx_mstate_global->__pyx_n_s_cfilename #define __pyx_n_s_cfilename_index __pyx_mstate_global->__pyx_n_s_cfilename_index #define __pyx_n_s_cfn __pyx_mstate_global->__pyx_n_s_cfn #define __pyx_n_s_cline_in_traceback __pyx_mstate_global->__pyx_n_s_cline_in_traceback #define __pyx_n_s_close __pyx_mstate_global->__pyx_n_s_close #define __pyx_n_s_closed __pyx_mstate_global->__pyx_n_s_closed #define __pyx_n_s_conf __pyx_mstate_global->__pyx_n_s_conf #define __pyx_n_s_conf_data __pyx_mstate_global->__pyx_n_s_conf_data #define __pyx_n_s_contigs __pyx_mstate_global->__pyx_n_s_contigs #define __pyx_kp_u_could_not_create_iterator_for_re __pyx_mstate_global->__pyx_kp_u_could_not_create_iterator_for_re #define __pyx_kp_u_could_not_create_iterator_possib __pyx_mstate_global->__pyx_kp_u_could_not_create_iterator_possib #define __pyx_kp_u_could_not_load_tbi_csi_index_of __pyx_mstate_global->__pyx_kp_u_could_not_load_tbi_csi_index_of #define __pyx_kp_u_could_not_open_file_s __pyx_mstate_global->__pyx_kp_u_could_not_open_file_s #define __pyx_kp_u_could_not_open_for_reading_heade __pyx_mstate_global->__pyx_kp_u_could_not_open_for_reading_heade #define __pyx_kp_u_could_not_open_index_for_s __pyx_mstate_global->__pyx_kp_u_could_not_open_index_for_s #define __pyx_kp_u_could_not_open_s_for_reading __pyx_mstate_global->__pyx_kp_u_could_not_open_s_for_reading #define __pyx_kp_u_could_not_open_s_for_writing __pyx_mstate_global->__pyx_kp_u_could_not_open_s_for_writing #define __pyx_n_s_cpy __pyx_mstate_global->__pyx_n_s_cpy #define __pyx_n_s_csi __pyx_mstate_global->__pyx_n_s_csi #define __pyx_kp_u_csi_2 __pyx_mstate_global->__pyx_kp_u_csi_2 #define __pyx_n_s_cstr __pyx_mstate_global->__pyx_n_s_cstr #define __pyx_n_s_dict __pyx_mstate_global->__pyx_n_s_dict #define __pyx_n_s_dict_2 __pyx_mstate_global->__pyx_n_s_dict_2 #define __pyx_kp_u_disable __pyx_mstate_global->__pyx_kp_u_disable #define __pyx_n_s_doc __pyx_mstate_global->__pyx_n_s_doc #define __pyx_n_s_dup __pyx_mstate_global->__pyx_n_s_dup #define __pyx_kp_s_empty_iterator __pyx_mstate_global->__pyx_kp_s_empty_iterator #define __pyx_kp_u_enable __pyx_mstate_global->__pyx_kp_u_enable #define __pyx_n_s_encoding __pyx_mstate_global->__pyx_n_s_encoding #define __pyx_n_s_end __pyx_mstate_global->__pyx_n_s_end #define __pyx_n_s_end_col __pyx_mstate_global->__pyx_n_s_end_col #define __pyx_kp_u_end_out_of_range_i __pyx_mstate_global->__pyx_kp_u_end_out_of_range_i #define __pyx_kp_u_error_i_when_closing_file_s __pyx_mstate_global->__pyx_kp_u_error_i_when_closing_file_s #define __pyx_kp_u_error_i_when_writing_to_file_s __pyx_mstate_global->__pyx_kp_u_error_i_when_writing_to_file_s #define __pyx_n_s_exists __pyx_mstate_global->__pyx_n_s_exists #define __pyx_n_s_fd_src __pyx_mstate_global->__pyx_n_s_fd_src #define __pyx_n_s_fetch __pyx_mstate_global->__pyx_n_s_fetch #define __pyx_kp_u_file_s_not_found __pyx_mstate_global->__pyx_kp_u_file_s_not_found #define __pyx_n_s_filename __pyx_mstate_global->__pyx_n_s_filename #define __pyx_n_s_filename_in __pyx_mstate_global->__pyx_n_s_filename_in #define __pyx_n_s_filename_index __pyx_mstate_global->__pyx_n_s_filename_index #define __pyx_n_s_filename_out __pyx_mstate_global->__pyx_n_s_filename_out #define __pyx_kp_u_filename_s_already_exists_use_fo __pyx_mstate_global->__pyx_kp_u_filename_s_already_exists_use_fo #define __pyx_n_s_fileobj __pyx_mstate_global->__pyx_n_s_fileobj #define __pyx_n_s_fmt __pyx_mstate_global->__pyx_n_s_fmt #define __pyx_n_s_fn __pyx_mstate_global->__pyx_n_s_fn #define __pyx_n_s_fn_index __pyx_mstate_global->__pyx_n_s_fn_index #define __pyx_n_s_fnidx __pyx_mstate_global->__pyx_n_s_fnidx #define __pyx_n_s_force __pyx_mstate_global->__pyx_n_s_force #define __pyx_n_s_format __pyx_mstate_global->__pyx_n_s_format #define __pyx_n_s_fp __pyx_mstate_global->__pyx_n_s_fp #define __pyx_kp_u_gc __pyx_mstate_global->__pyx_kp_u_gc #define __pyx_n_s_get_encoding __pyx_mstate_global->__pyx_n_s_get_encoding #define __pyx_n_s_getstate __pyx_mstate_global->__pyx_n_s_getstate #define __pyx_n_u_gff __pyx_mstate_global->__pyx_n_u_gff #define __pyx_kp_u_gz __pyx_mstate_global->__pyx_kp_u_gz #define __pyx_n_s_import __pyx_mstate_global->__pyx_n_s_import #define __pyx_kp_u_incomplete_line_at_s __pyx_mstate_global->__pyx_kp_u_incomplete_line_at_s #define __pyx_n_s_index __pyx_mstate_global->__pyx_n_s_index #define __pyx_kp_u_index_s_not_found __pyx_mstate_global->__pyx_kp_u_index_s_not_found #define __pyx_n_s_infile __pyx_mstate_global->__pyx_n_s_infile #define __pyx_n_s_init __pyx_mstate_global->__pyx_n_s_init #define __pyx_n_s_init_subclass __pyx_mstate_global->__pyx_n_s_init_subclass #define __pyx_n_s_initializing __pyx_mstate_global->__pyx_n_s_initializing #define __pyx_kp_u_invalid_file_opening_mode_s __pyx_mstate_global->__pyx_kp_u_invalid_file_opening_mode_s #define __pyx_n_s_is_coroutine __pyx_mstate_global->__pyx_n_s_is_coroutine #define __pyx_n_s_is_empty __pyx_mstate_global->__pyx_n_s_is_empty #define __pyx_n_s_is_open __pyx_mstate_global->__pyx_n_s_is_open #define __pyx_kp_u_isenabled __pyx_mstate_global->__pyx_kp_u_isenabled #define __pyx_n_s_iter __pyx_mstate_global->__pyx_n_s_iter #define __pyx_kp_s_iterate_over_infile_Permits_the __pyx_mstate_global->__pyx_kp_s_iterate_over_infile_Permits_the #define __pyx_kp_u_iteration_on_closed_file __pyx_mstate_global->__pyx_kp_u_iteration_on_closed_file #define __pyx_n_s_itr __pyx_mstate_global->__pyx_n_s_itr #define __pyx_n_s_keep_original __pyx_mstate_global->__pyx_n_s_keep_original #define __pyx_n_s_keys __pyx_mstate_global->__pyx_n_s_keys #define __pyx_n_s_length __pyx_mstate_global->__pyx_n_s_length #define __pyx_n_s_line __pyx_mstate_global->__pyx_n_s_line #define __pyx_n_s_line_skip __pyx_mstate_global->__pyx_n_s_line_skip #define __pyx_n_s_main __pyx_mstate_global->__pyx_n_s_main #define __pyx_n_s_meta_char __pyx_mstate_global->__pyx_n_s_meta_char #define __pyx_n_s_metaclass __pyx_mstate_global->__pyx_n_s_metaclass #define __pyx_n_s_min_shift __pyx_mstate_global->__pyx_n_s_min_shift #define __pyx_n_s_mode __pyx_mstate_global->__pyx_n_s_mode #define __pyx_n_s_module __pyx_mstate_global->__pyx_n_s_module #define __pyx_n_s_multiple_iterators __pyx_mstate_global->__pyx_n_s_multiple_iterators #define __pyx_n_s_name __pyx_mstate_global->__pyx_n_s_name #define __pyx_n_s_nbytes __pyx_mstate_global->__pyx_n_s_nbytes #define __pyx_kp_u_neither_preset_nor_seq_col_start __pyx_mstate_global->__pyx_kp_u_neither_preset_nor_seq_col_start #define __pyx_n_s_new __pyx_mstate_global->__pyx_n_s_new #define __pyx_n_s_next __pyx_mstate_global->__pyx_n_s_next #define __pyx_kp_s_no_default___reduce___due_to_non __pyx_mstate_global->__pyx_kp_s_no_default___reduce___due_to_non #define __pyx_n_s_open __pyx_mstate_global->__pyx_n_s_open #define __pyx_n_s_os __pyx_mstate_global->__pyx_n_s_os #define __pyx_kp_u_parse_method_of_s_not_implemente __pyx_mstate_global->__pyx_kp_u_parse_method_of_s_not_implemente #define __pyx_n_s_parser __pyx_mstate_global->__pyx_n_s_parser #define __pyx_n_s_path __pyx_mstate_global->__pyx_n_s_path #define __pyx_n_s_pickle __pyx_mstate_global->__pyx_n_s_pickle #define __pyx_n_s_prepare __pyx_mstate_global->__pyx_n_s_prepare #define __pyx_n_s_preset __pyx_mstate_global->__pyx_n_s_preset #define __pyx_n_s_preset2conf __pyx_mstate_global->__pyx_n_s_preset2conf #define __pyx_n_u_psltbl __pyx_mstate_global->__pyx_n_u_psltbl #define __pyx_n_s_pysam_libctabix __pyx_mstate_global->__pyx_n_s_pysam_libctabix #define __pyx_kp_s_pysam_libctabix_pyx __pyx_mstate_global->__pyx_kp_s_pysam_libctabix_pyx #define __pyx_n_s_pyx_PickleError __pyx_mstate_global->__pyx_n_s_pyx_PickleError #define __pyx_n_s_pyx_checksum __pyx_mstate_global->__pyx_n_s_pyx_checksum #define __pyx_n_s_pyx_result __pyx_mstate_global->__pyx_n_s_pyx_result #define __pyx_n_s_pyx_state __pyx_mstate_global->__pyx_n_s_pyx_state #define __pyx_n_s_pyx_type __pyx_mstate_global->__pyx_n_s_pyx_type #define __pyx_n_s_pyx_unpickle_Parser __pyx_mstate_global->__pyx_n_s_pyx_unpickle_Parser #define __pyx_n_s_pyx_unpickle_asBed __pyx_mstate_global->__pyx_n_s_pyx_unpickle_asBed #define __pyx_n_s_pyx_unpickle_asGFF3 __pyx_mstate_global->__pyx_n_s_pyx_unpickle_asGFF3 #define __pyx_n_s_pyx_unpickle_asGTF __pyx_mstate_global->__pyx_n_s_pyx_unpickle_asGTF #define __pyx_n_s_pyx_unpickle_asTuple __pyx_mstate_global->__pyx_n_s_pyx_unpickle_asTuple #define __pyx_n_s_pyx_unpickle_asVCF __pyx_mstate_global->__pyx_n_s_pyx_unpickle_asVCF #define __pyx_n_s_pyx_vtable __pyx_mstate_global->__pyx_n_s_pyx_vtable #define __pyx_n_s_qualname __pyx_mstate_global->__pyx_n_s_qualname #define __pyx_n_s_r __pyx_mstate_global->__pyx_n_s_r #define __pyx_n_u_r __pyx_mstate_global->__pyx_n_u_r #define __pyx_n_s_readline __pyx_mstate_global->__pyx_n_s_readline #define __pyx_n_s_reduce __pyx_mstate_global->__pyx_n_s_reduce #define __pyx_n_s_reduce_cython __pyx_mstate_global->__pyx_n_s_reduce_cython #define __pyx_n_s_reduce_ex __pyx_mstate_global->__pyx_n_s_reduce_ex #define __pyx_n_s_reference __pyx_mstate_global->__pyx_n_s_reference #define __pyx_n_s_region __pyx_mstate_global->__pyx_n_s_region #define __pyx_n_s_retval __pyx_mstate_global->__pyx_n_s_retval #define __pyx_kp_u_s __pyx_mstate_global->__pyx_kp_u_s #define __pyx_n_s_s_2 __pyx_mstate_global->__pyx_n_s_s_2 #define __pyx_kp_u_s_i __pyx_mstate_global->__pyx_kp_u_s_i #define __pyx_kp_u_s_i_i __pyx_mstate_global->__pyx_kp_u_s_i_i #define __pyx_n_u_sam __pyx_mstate_global->__pyx_n_u_sam #define __pyx_n_s_self __pyx_mstate_global->__pyx_n_s_self #define __pyx_kp_s_self_gzipfile_self_kstream_canno __pyx_mstate_global->__pyx_kp_s_self_gzipfile_self_kstream_canno #define __pyx_kp_s_self_iterator_cannot_be_converte __pyx_mstate_global->__pyx_kp_s_self_iterator_cannot_be_converte #define __pyx_n_s_seq_col __pyx_mstate_global->__pyx_n_s_seq_col #define __pyx_n_s_set_encoding __pyx_mstate_global->__pyx_n_s_set_encoding #define __pyx_n_s_set_name __pyx_mstate_global->__pyx_n_s_set_name #define __pyx_n_s_setstate __pyx_mstate_global->__pyx_n_s_setstate #define __pyx_n_s_setstate_cython __pyx_mstate_global->__pyx_n_s_setstate_cython #define __pyx_n_s_spec __pyx_mstate_global->__pyx_n_s_spec #define __pyx_n_s_start __pyx_mstate_global->__pyx_n_s_start #define __pyx_n_s_start_col __pyx_mstate_global->__pyx_n_s_start_col #define __pyx_kp_u_start_i_end_i __pyx_mstate_global->__pyx_kp_u_start_i_end_i #define __pyx_kp_u_start_out_of_range_i __pyx_mstate_global->__pyx_kp_u_start_out_of_range_i #define __pyx_n_s_state __pyx_mstate_global->__pyx_n_s_state #define __pyx_kp_s_stringsource __pyx_mstate_global->__pyx_kp_s_stringsource #define __pyx_n_s_suffix __pyx_mstate_global->__pyx_n_s_suffix #define __pyx_n_s_super __pyx_mstate_global->__pyx_n_s_super #define __pyx_n_s_sys __pyx_mstate_global->__pyx_n_s_sys #define __pyx_n_s_tabix_compress __pyx_mstate_global->__pyx_n_s_tabix_compress #define __pyx_n_u_tabix_compress __pyx_mstate_global->__pyx_n_u_tabix_compress #define __pyx_n_s_tabix_file_iterator __pyx_mstate_global->__pyx_n_s_tabix_file_iterator #define __pyx_n_u_tabix_file_iterator __pyx_mstate_global->__pyx_n_u_tabix_file_iterator #define __pyx_n_s_tabix_file_iterator___reduce_cyt __pyx_mstate_global->__pyx_n_s_tabix_file_iterator___reduce_cyt #define __pyx_n_s_tabix_file_iterator___setstate_c __pyx_mstate_global->__pyx_n_s_tabix_file_iterator___setstate_c #define __pyx_n_s_tabix_generic_iterator __pyx_mstate_global->__pyx_n_s_tabix_generic_iterator #define __pyx_n_u_tabix_generic_iterator __pyx_mstate_global->__pyx_n_u_tabix_generic_iterator #define __pyx_n_s_tabix_generic_iterator___init __pyx_mstate_global->__pyx_n_s_tabix_generic_iterator___init #define __pyx_n_s_tabix_generic_iterator___iter __pyx_mstate_global->__pyx_n_s_tabix_generic_iterator___iter #define __pyx_n_s_tabix_generic_iterator___next __pyx_mstate_global->__pyx_n_s_tabix_generic_iterator___next #define __pyx_n_s_tabix_index __pyx_mstate_global->__pyx_n_s_tabix_index #define __pyx_n_u_tabix_index __pyx_mstate_global->__pyx_n_u_tabix_index #define __pyx_n_s_tabix_iterator __pyx_mstate_global->__pyx_n_s_tabix_iterator #define __pyx_n_u_tabix_iterator __pyx_mstate_global->__pyx_n_u_tabix_iterator #define __pyx_kp_u_tbi __pyx_mstate_global->__pyx_kp_u_tbi #define __pyx_n_s_tell __pyx_mstate_global->__pyx_n_s_tell #define __pyx_n_s_test __pyx_mstate_global->__pyx_n_s_test #define __pyx_n_s_threads __pyx_mstate_global->__pyx_n_s_threads #define __pyx_kp_u_unknown_preset __pyx_mstate_global->__pyx_kp_u_unknown_preset #define __pyx_n_s_unlink __pyx_mstate_global->__pyx_n_s_unlink #define __pyx_n_s_update __pyx_mstate_global->__pyx_n_s_update #define __pyx_n_s_use_setstate __pyx_mstate_global->__pyx_n_s_use_setstate #define __pyx_kp_u_valid_presets_are __pyx_mstate_global->__pyx_kp_u_valid_presets_are #define __pyx_n_u_vcf __pyx_mstate_global->__pyx_n_u_vcf #define __pyx_kp_u_writing_failed __pyx_mstate_global->__pyx_kp_u_writing_failed #define __pyx_n_s_zerobased __pyx_mstate_global->__pyx_n_s_zerobased #define __pyx_int_0 __pyx_mstate_global->__pyx_int_0 #define __pyx_int_1 __pyx_mstate_global->__pyx_int_1 #define __pyx_int_2 __pyx_mstate_global->__pyx_int_2 #define __pyx_int_3 __pyx_mstate_global->__pyx_int_3 #define __pyx_int_4 __pyx_mstate_global->__pyx_int_4 #define __pyx_int_5 __pyx_mstate_global->__pyx_int_5 #define __pyx_int_15 __pyx_mstate_global->__pyx_int_15 #define __pyx_int_17 __pyx_mstate_global->__pyx_int_17 #define __pyx_int_18 __pyx_mstate_global->__pyx_int_18 #define __pyx_int_35 __pyx_mstate_global->__pyx_int_35 #define __pyx_int_64 __pyx_mstate_global->__pyx_int_64 #define __pyx_int_21667264 __pyx_mstate_global->__pyx_int_21667264 #define __pyx_int_139192863 __pyx_mstate_global->__pyx_int_139192863 #define __pyx_int_243541226 __pyx_mstate_global->__pyx_int_243541226 #define __pyx_int_neg_1 __pyx_mstate_global->__pyx_int_neg_1 #define __pyx_codeobj_ __pyx_mstate_global->__pyx_codeobj_ #define __pyx_tuple__19 __pyx_mstate_global->__pyx_tuple__19 #define __pyx_tuple__20 __pyx_mstate_global->__pyx_tuple__20 #define __pyx_tuple__24 __pyx_mstate_global->__pyx_tuple__24 #define __pyx_tuple__38 __pyx_mstate_global->__pyx_tuple__38 #define __pyx_tuple__41 __pyx_mstate_global->__pyx_tuple__41 #define __pyx_tuple__45 __pyx_mstate_global->__pyx_tuple__45 #define __pyx_tuple__55 __pyx_mstate_global->__pyx_tuple__55 #define __pyx_tuple__63 __pyx_mstate_global->__pyx_tuple__63 #define __pyx_tuple__64 __pyx_mstate_global->__pyx_tuple__64 #define __pyx_tuple__65 __pyx_mstate_global->__pyx_tuple__65 #define __pyx_tuple__66 __pyx_mstate_global->__pyx_tuple__66 #define __pyx_tuple__67 __pyx_mstate_global->__pyx_tuple__67 #define __pyx_tuple__68 __pyx_mstate_global->__pyx_tuple__68 #define __pyx_tuple__69 __pyx_mstate_global->__pyx_tuple__69 #define __pyx_tuple__70 __pyx_mstate_global->__pyx_tuple__70 #define __pyx_tuple__71 __pyx_mstate_global->__pyx_tuple__71 #define __pyx_tuple__72 __pyx_mstate_global->__pyx_tuple__72 #define __pyx_tuple__73 __pyx_mstate_global->__pyx_tuple__73 #define __pyx_tuple__74 __pyx_mstate_global->__pyx_tuple__74 #define __pyx_tuple__75 __pyx_mstate_global->__pyx_tuple__75 #define __pyx_tuple__76 __pyx_mstate_global->__pyx_tuple__76 #define __pyx_tuple__77 __pyx_mstate_global->__pyx_tuple__77 #define __pyx_codeobj__2 __pyx_mstate_global->__pyx_codeobj__2 #define __pyx_codeobj__3 __pyx_mstate_global->__pyx_codeobj__3 #define __pyx_codeobj__4 __pyx_mstate_global->__pyx_codeobj__4 #define __pyx_codeobj__5 __pyx_mstate_global->__pyx_codeobj__5 #define __pyx_codeobj__6 __pyx_mstate_global->__pyx_codeobj__6 #define __pyx_codeobj__7 __pyx_mstate_global->__pyx_codeobj__7 #define __pyx_codeobj__8 __pyx_mstate_global->__pyx_codeobj__8 #define __pyx_codeobj__9 __pyx_mstate_global->__pyx_codeobj__9 #define __pyx_codeobj__10 __pyx_mstate_global->__pyx_codeobj__10 #define __pyx_codeobj__11 __pyx_mstate_global->__pyx_codeobj__11 #define __pyx_codeobj__12 __pyx_mstate_global->__pyx_codeobj__12 #define __pyx_codeobj__13 __pyx_mstate_global->__pyx_codeobj__13 #define __pyx_codeobj__14 __pyx_mstate_global->__pyx_codeobj__14 #define __pyx_codeobj__15 __pyx_mstate_global->__pyx_codeobj__15 #define __pyx_codeobj__17 __pyx_mstate_global->__pyx_codeobj__17 #define __pyx_codeobj__18 __pyx_mstate_global->__pyx_codeobj__18 #define __pyx_codeobj__21 __pyx_mstate_global->__pyx_codeobj__21 #define __pyx_codeobj__22 __pyx_mstate_global->__pyx_codeobj__22 #define __pyx_codeobj__23 __pyx_mstate_global->__pyx_codeobj__23 #define __pyx_codeobj__25 __pyx_mstate_global->__pyx_codeobj__25 #define __pyx_codeobj__26 __pyx_mstate_global->__pyx_codeobj__26 #define __pyx_codeobj__27 __pyx_mstate_global->__pyx_codeobj__27 #define __pyx_codeobj__28 __pyx_mstate_global->__pyx_codeobj__28 #define __pyx_codeobj__29 __pyx_mstate_global->__pyx_codeobj__29 #define __pyx_codeobj__30 __pyx_mstate_global->__pyx_codeobj__30 #define __pyx_codeobj__31 __pyx_mstate_global->__pyx_codeobj__31 #define __pyx_codeobj__32 __pyx_mstate_global->__pyx_codeobj__32 #define __pyx_codeobj__33 __pyx_mstate_global->__pyx_codeobj__33 #define __pyx_codeobj__34 __pyx_mstate_global->__pyx_codeobj__34 #define __pyx_codeobj__35 __pyx_mstate_global->__pyx_codeobj__35 #define __pyx_codeobj__36 __pyx_mstate_global->__pyx_codeobj__36 #define __pyx_codeobj__37 __pyx_mstate_global->__pyx_codeobj__37 #define __pyx_codeobj__40 __pyx_mstate_global->__pyx_codeobj__40 #define __pyx_codeobj__46 __pyx_mstate_global->__pyx_codeobj__46 #define __pyx_codeobj__47 __pyx_mstate_global->__pyx_codeobj__47 #define __pyx_codeobj__48 __pyx_mstate_global->__pyx_codeobj__48 #define __pyx_codeobj__49 __pyx_mstate_global->__pyx_codeobj__49 #define __pyx_codeobj__50 __pyx_mstate_global->__pyx_codeobj__50 #define __pyx_codeobj__51 __pyx_mstate_global->__pyx_codeobj__51 #define __pyx_codeobj__52 __pyx_mstate_global->__pyx_codeobj__52 #define __pyx_codeobj__53 __pyx_mstate_global->__pyx_codeobj__53 #define __pyx_codeobj__54 __pyx_mstate_global->__pyx_codeobj__54 #define __pyx_codeobj__57 __pyx_mstate_global->__pyx_codeobj__57 #define __pyx_codeobj__58 __pyx_mstate_global->__pyx_codeobj__58 #define __pyx_codeobj__59 __pyx_mstate_global->__pyx_codeobj__59 #define __pyx_codeobj__60 __pyx_mstate_global->__pyx_codeobj__60 #define __pyx_codeobj__61 __pyx_mstate_global->__pyx_codeobj__61 /* #### Code section: module_code ### */ /* "cpython/complex.pxd":19 * * @property * cdef inline double real(self) noexcept: # <<<<<<<<<<<<<< * return self.cval.real * */ static CYTHON_INLINE double __pyx_f_7cpython_7complex_7complex_4real_real(PyComplexObject *__pyx_v_self) { double __pyx_r; /* "cpython/complex.pxd":20 * @property * cdef inline double real(self) noexcept: * return self.cval.real # <<<<<<<<<<<<<< * * @property */ __pyx_r = __pyx_v_self->cval.real; goto __pyx_L0; /* "cpython/complex.pxd":19 * * @property * cdef inline double real(self) noexcept: # <<<<<<<<<<<<<< * return self.cval.real * */ /* function exit code */ __pyx_L0:; return __pyx_r; } /* "cpython/complex.pxd":23 * * @property * cdef inline double imag(self) noexcept: # <<<<<<<<<<<<<< * return self.cval.imag * */ static CYTHON_INLINE double __pyx_f_7cpython_7complex_7complex_4imag_imag(PyComplexObject *__pyx_v_self) { double __pyx_r; /* "cpython/complex.pxd":24 * @property * cdef inline double imag(self) noexcept: * return self.cval.imag # <<<<<<<<<<<<<< * * # PyTypeObject PyComplex_Type */ __pyx_r = __pyx_v_self->cval.imag; goto __pyx_L0; /* "cpython/complex.pxd":23 * * @property * cdef inline double imag(self) noexcept: # <<<<<<<<<<<<<< * return self.cval.imag * */ /* function exit code */ __pyx_L0:; return __pyx_r; } /* "cpython/contextvars.pxd":112 * * * cdef inline object get_value(var, default_value=None): # <<<<<<<<<<<<<< * """Return a new reference to the value of the context variable, * or the default value of the context variable, */ static CYTHON_INLINE PyObject *__pyx_f_7cpython_11contextvars_get_value(PyObject *__pyx_v_var, struct __pyx_opt_args_7cpython_11contextvars_get_value *__pyx_optional_args) { PyObject *__pyx_v_default_value = 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__Pyx_INCREF(Py_None); goto __pyx_L0; __pyx_L1_error:; __Pyx_XDECREF(__pyx_t_1); __Pyx_XDECREF(__pyx_t_5); __Pyx_XDECREF(__pyx_t_6); __Pyx_XDECREF(__pyx_t_7); __Pyx_AddTraceback("pysam.libctabix.__pyx_unpickle_asVCF__set_state", __pyx_clineno, __pyx_lineno, __pyx_filename); __pyx_r = 0; __pyx_L0:; __Pyx_XGIVEREF(__pyx_r); __Pyx_TraceReturn(__pyx_r, 0); __Pyx_RefNannyFinishContext(); return __pyx_r; } static struct __pyx_vtabstruct_5pysam_9libctabix_tabix_file_iterator __pyx_vtable_5pysam_9libctabix_tabix_file_iterator; static PyObject *__pyx_tp_new_5pysam_9libctabix_tabix_file_iterator(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *p; PyObject *o; #if CYTHON_COMPILING_IN_LIMITED_API allocfunc alloc_func = (allocfunc)PyType_GetSlot(t, Py_tp_alloc); o = alloc_func(t, 0); #else if (likely(!__Pyx_PyType_HasFeature(t, Py_TPFLAGS_IS_ABSTRACT))) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; #endif p = ((struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *)o); p->__pyx_vtab = __pyx_vtabptr_5pysam_9libctabix_tabix_file_iterator; p->parser = ((struct __pyx_obj_5pysam_9libctabix_Parser *)Py_None); Py_INCREF(Py_None); p->infile = Py_None; Py_INCREF(Py_None); if (unlikely(__pyx_pw_5pysam_9libctabix_19tabix_file_iterator_1__cinit__(o, a, k) < 0)) goto bad; return o; bad: Py_DECREF(o); o = 0; return NULL; } static void __pyx_tp_dealloc_5pysam_9libctabix_tabix_file_iterator(PyObject *o) { struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *p = (struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *)o; #if CYTHON_USE_TP_FINALIZE if (unlikely((PY_VERSION_HEX >= 0x03080000 || __Pyx_PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE)) && __Pyx_PyObject_GetSlot(o, tp_finalize, destructor)) && !__Pyx_PyObject_GC_IsFinalized(o)) { if (__Pyx_PyObject_GetSlot(o, tp_dealloc, destructor) == __pyx_tp_dealloc_5pysam_9libctabix_tabix_file_iterator) { if (PyObject_CallFinalizerFromDealloc(o)) return; } } #endif PyObject_GC_UnTrack(o); { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); __Pyx_SET_REFCNT(o, Py_REFCNT(o) + 1); __pyx_pw_5pysam_9libctabix_19tabix_file_iterator_5__dealloc__(o); __Pyx_SET_REFCNT(o, Py_REFCNT(o) - 1); PyErr_Restore(etype, eval, etb); } Py_CLEAR(p->parser); Py_CLEAR(p->infile); #if CYTHON_USE_TYPE_SLOTS || CYTHON_COMPILING_IN_PYPY (*Py_TYPE(o)->tp_free)(o); #else { freefunc tp_free = (freefunc)PyType_GetSlot(Py_TYPE(o), Py_tp_free); if (tp_free) tp_free(o); } #endif } static int __pyx_tp_traverse_5pysam_9libctabix_tabix_file_iterator(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *p = (struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *)o; if (p->parser) { e = (*v)(((PyObject *)p->parser), a); if (e) return e; } if (p->infile) { e = (*v)(p->infile, a); if (e) return e; } return 0; } static int __pyx_tp_clear_5pysam_9libctabix_tabix_file_iterator(PyObject *o) { PyObject* tmp; struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *p = (struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator *)o; tmp = ((PyObject*)p->parser); p->parser = ((struct __pyx_obj_5pysam_9libctabix_Parser *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->infile); p->infile = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_specialmethod___pyx_pw_5pysam_9libctabix_19tabix_file_iterator_7__next__(PyObject *self, CYTHON_UNUSED PyObject *arg) { PyObject *res = __pyx_pw_5pysam_9libctabix_19tabix_file_iterator_7__next__(self); if (!res && !PyErr_Occurred()) { PyErr_SetNone(PyExc_StopIteration); } return res; } static PyMethodDef __pyx_methods_5pysam_9libctabix_tabix_file_iterator[] = { {"__next__", (PyCFunction)__pyx_specialmethod___pyx_pw_5pysam_9libctabix_19tabix_file_iterator_7__next__, METH_NOARGS|METH_COEXIST, 0}, {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_19tabix_file_iterator_9__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_19tabix_file_iterator_8__reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_19tabix_file_iterator_11__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_19tabix_file_iterator_10__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_tabix_file_iterator_slots[] = { {Py_tp_dealloc, (void *)__pyx_tp_dealloc_5pysam_9libctabix_tabix_file_iterator}, {Py_tp_doc, (void *)PyDoc_STR("iterate over a compressed or uncompressed ``infile``.\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_tabix_file_iterator}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_tabix_file_iterator}, {Py_tp_iter, (void *)__pyx_pw_5pysam_9libctabix_19tabix_file_iterator_3__iter__}, {Py_tp_iternext, (void *)__pyx_pw_5pysam_9libctabix_19tabix_file_iterator_7__next__}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_tabix_file_iterator}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_tabix_file_iterator}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_tabix_file_iterator_spec = { "pysam.libctabix.tabix_file_iterator", sizeof(struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_tabix_file_iterator_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_tabix_file_iterator = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""tabix_file_iterator", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_tabix_file_iterator), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_tabix_file_iterator, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("iterate over a compressed or uncompressed ``infile``.\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_tabix_file_iterator, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_tabix_file_iterator, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ __pyx_pw_5pysam_9libctabix_19tabix_file_iterator_3__iter__, /*tp_iter*/ __pyx_pw_5pysam_9libctabix_19tabix_file_iterator_7__next__, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_tabix_file_iterator, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_tabix_file_iterator, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_TabixFile __pyx_vtable_5pysam_9libctabix_TabixFile; static PyObject *__pyx_tp_new_5pysam_9libctabix_TabixFile(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_TabixFile *p; PyObject *o = __Pyx_PyType_GetSlot(__pyx_ptype_5pysam_10libchtslib_HTSFile, tp_new, newfunc)(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_5pysam_9libctabix_TabixFile *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_5pysam_10libchtslib_HTSFile*)__pyx_vtabptr_5pysam_9libctabix_TabixFile; p->filename_index = Py_None; Py_INCREF(Py_None); p->parser = ((struct __pyx_obj_5pysam_9libctabix_Parser *)Py_None); Py_INCREF(Py_None); p->encoding = Py_None; Py_INCREF(Py_None); if (unlikely(__pyx_pw_5pysam_9libctabix_9TabixFile_1__cinit__(o, a, k) < 0)) goto bad; return o; bad: Py_DECREF(o); o = 0; return NULL; } static void __pyx_tp_dealloc_5pysam_9libctabix_TabixFile(PyObject *o) { struct __pyx_obj_5pysam_9libctabix_TabixFile *p = (struct __pyx_obj_5pysam_9libctabix_TabixFile *)o; #if CYTHON_USE_TP_FINALIZE if (unlikely((PY_VERSION_HEX >= 0x03080000 || __Pyx_PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE)) && __Pyx_PyObject_GetSlot(o, tp_finalize, destructor)) && !__Pyx_PyObject_GC_IsFinalized(o)) { if (__Pyx_PyObject_GetSlot(o, tp_dealloc, destructor) == __pyx_tp_dealloc_5pysam_9libctabix_TabixFile) { if (PyObject_CallFinalizerFromDealloc(o)) return; } } #endif PyObject_GC_UnTrack(o); { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); __Pyx_SET_REFCNT(o, Py_REFCNT(o) + 1); __pyx_pw_5pysam_9libctabix_9TabixFile_11__dealloc__(o); __Pyx_SET_REFCNT(o, Py_REFCNT(o) - 1); PyErr_Restore(etype, eval, etb); } Py_CLEAR(p->filename_index); Py_CLEAR(p->parser); Py_CLEAR(p->encoding); #if PY_MAJOR_VERSION < 3 if (!(__pyx_ptype_5pysam_10libchtslib_HTSFile) || PyType_IS_GC(__pyx_ptype_5pysam_10libchtslib_HTSFile)) PyObject_GC_Track(o); #else if (PyType_IS_GC(__pyx_ptype_5pysam_10libchtslib_HTSFile)) PyObject_GC_Track(o); #endif if (likely(__pyx_ptype_5pysam_10libchtslib_HTSFile)) __Pyx_PyType_GetSlot(__pyx_ptype_5pysam_10libchtslib_HTSFile, tp_dealloc, destructor)(o); else __Pyx_call_next_tp_dealloc(o, __pyx_tp_dealloc_5pysam_9libctabix_TabixFile); } static int __pyx_tp_traverse_5pysam_9libctabix_TabixFile(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_5pysam_9libctabix_TabixFile *p = (struct __pyx_obj_5pysam_9libctabix_TabixFile *)o; e = ((likely(__pyx_ptype_5pysam_10libchtslib_HTSFile)) ? ((__pyx_ptype_5pysam_10libchtslib_HTSFile->tp_traverse) ? __pyx_ptype_5pysam_10libchtslib_HTSFile->tp_traverse(o, v, a) : 0) : __Pyx_call_next_tp_traverse(o, v, a, __pyx_tp_traverse_5pysam_9libctabix_TabixFile)); if (e) return e; if (p->filename_index) { e = (*v)(p->filename_index, a); if (e) return e; } if (p->parser) { e = (*v)(((PyObject *)p->parser), a); if (e) return e; } if (p->encoding) { e = (*v)(p->encoding, a); if (e) return e; } return 0; } static int __pyx_tp_clear_5pysam_9libctabix_TabixFile(PyObject *o) { PyObject* tmp; struct __pyx_obj_5pysam_9libctabix_TabixFile *p = (struct __pyx_obj_5pysam_9libctabix_TabixFile *)o; if (likely(__pyx_ptype_5pysam_10libchtslib_HTSFile)) { if (__pyx_ptype_5pysam_10libchtslib_HTSFile->tp_clear) __pyx_ptype_5pysam_10libchtslib_HTSFile->tp_clear(o); } else __Pyx_call_next_tp_clear(o, __pyx_tp_clear_5pysam_9libctabix_TabixFile); tmp = ((PyObject*)p->filename_index); p->filename_index = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->parser); p->parser = ((struct __pyx_obj_5pysam_9libctabix_Parser *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->encoding); p->encoding = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_getprop_5pysam_9libctabix_9TabixFile_header(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_5pysam_9libctabix_9TabixFile_6header_1__get__(o); } static PyObject *__pyx_getprop_5pysam_9libctabix_9TabixFile_contigs(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_5pysam_9libctabix_9TabixFile_7contigs_1__get__(o); } static PyObject *__pyx_getprop_5pysam_9libctabix_9TabixFile_filename_index(PyObject *o, CYTHON_UNUSED void *x) { return __pyx_pw_5pysam_9libctabix_9TabixFile_14filename_index_1__get__(o); } static PyMethodDef __pyx_methods_5pysam_9libctabix_TabixFile[] = { {"_open", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_9TabixFile_3_open, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_9TabixFile_2_open}, {"_dup", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_9TabixFile_5_dup, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_9TabixFile_4_dup}, {"fetch", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_9TabixFile_7fetch, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_9TabixFile_6fetch}, {"close", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_9TabixFile_9close, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_9TabixFile_8close}, {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_9TabixFile_13__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_9TabixFile_12__reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_9TabixFile_15__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_9TabixFile_14__setstate_cython__}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_5pysam_9libctabix_TabixFile[] = { {(char *)"header", __pyx_getprop_5pysam_9libctabix_9TabixFile_header, 0, (char *)PyDoc_STR("the file header.\n\n The file header consists of the lines at the beginning of a\n file that are prefixed by the comment character ``#``.\n \n .. note::\n The header is returned as an iterator presenting lines\n without the newline character.\n "), 0}, {(char *)"contigs", __pyx_getprop_5pysam_9libctabix_9TabixFile_contigs, 0, (char *)PyDoc_STR("list of chromosome names"), 0}, {(char *)"filename_index", __pyx_getprop_5pysam_9libctabix_9TabixFile_filename_index, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_TabixFile_slots[] = { {Py_tp_dealloc, (void *)__pyx_tp_dealloc_5pysam_9libctabix_TabixFile}, {Py_tp_doc, (void *)PyDoc_STR("Random access to bgzf formatted files that\n have been indexed by :term:`tabix`.\n\n The file is automatically opened. The index file of file\n ``<filename>`` is expected to be called ``<filename>.tbi``\n by default (see parameter `index`).\n \n Parameters\n ----------\n \n filename : string\n Filename of bgzf file to be opened.\n\n index : string\n The filename of the index. If not set, the default is to\n assume that the index is called ``filename.tbi``\n\n mode : char\n The file opening mode. Currently, only ``r`` is permitted.\n \n parser : :class:`pysam.Parser`\n \n sets the default parser for this tabix file. If `parser`\n is None, the results are returned as an unparsed string.\n Otherwise, `parser` is assumed to be a functor that will return\n parsed data (see for example :class:`~pysam.asTuple` and\n :class:`~pysam.asGTF`).\n\n encoding : string\n\n The encoding passed to the parser\n\n threads: integer\n Number of threads to use for decompressing Tabix files.\n (Default=1)\n\n\n Raises\n ------\n \n ValueError\n if index file is missing.\n\n IOError\n if file could not be opened\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_TabixFile}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_TabixFile}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_TabixFile}, {Py_tp_getset, (void *)__pyx_getsets_5pysam_9libctabix_TabixFile}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_TabixFile}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_TabixFile_spec = { "pysam.libctabix.TabixFile", sizeof(struct __pyx_obj_5pysam_9libctabix_TabixFile), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC|Py_TPFLAGS_HAVE_FINALIZE, __pyx_type_5pysam_9libctabix_TabixFile_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_TabixFile = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""TabixFile", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_TabixFile), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_TabixFile, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC|Py_TPFLAGS_HAVE_FINALIZE, /*tp_flags*/ PyDoc_STR("Random access to bgzf formatted files that\n have been indexed by :term:`tabix`.\n\n The file is automatically opened. The index file of file\n ``<filename>`` is expected to be called ``<filename>.tbi``\n by default (see parameter `index`).\n \n Parameters\n ----------\n \n filename : string\n Filename of bgzf file to be opened.\n\n index : string\n The filename of the index. If not set, the default is to\n assume that the index is called ``filename.tbi``\n\n mode : char\n The file opening mode. Currently, only ``r`` is permitted.\n \n parser : :class:`pysam.Parser`\n \n sets the default parser for this tabix file. If `parser`\n is None, the results are returned as an unparsed string.\n Otherwise, `parser` is assumed to be a functor that will return\n parsed data (see for example :class:`~pysam.asTuple` and\n :class:`~pysam.asGTF`).\n\n encoding : string\n\n The encoding passed to the parser\n\n threads: integer\n Number of threads to use for decompressing Tabix files.\n (Default=1)\n\n\n Raises\n ------\n \n ValueError\n if index file is missing.\n\n IOError\n if file could not be opened\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_TabixFile, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_TabixFile, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_TabixFile, /*tp_methods*/ 0, /*tp_members*/ __pyx_getsets_5pysam_9libctabix_TabixFile, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif 0, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_TabixFile, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_Parser __pyx_vtable_5pysam_9libctabix_Parser; static PyObject *__pyx_tp_new_5pysam_9libctabix_Parser(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { struct __pyx_obj_5pysam_9libctabix_Parser *p; PyObject *o; #if CYTHON_COMPILING_IN_LIMITED_API allocfunc alloc_func = (allocfunc)PyType_GetSlot(t, Py_tp_alloc); o = alloc_func(t, 0); #else if (likely(!__Pyx_PyType_HasFeature(t, Py_TPFLAGS_IS_ABSTRACT))) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; #endif p = ((struct __pyx_obj_5pysam_9libctabix_Parser *)o); p->__pyx_vtab = __pyx_vtabptr_5pysam_9libctabix_Parser; p->encoding = Py_None; Py_INCREF(Py_None); return o; } static void __pyx_tp_dealloc_5pysam_9libctabix_Parser(PyObject *o) { struct __pyx_obj_5pysam_9libctabix_Parser *p = (struct __pyx_obj_5pysam_9libctabix_Parser *)o; #if CYTHON_USE_TP_FINALIZE if (unlikely((PY_VERSION_HEX >= 0x03080000 || __Pyx_PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE)) && __Pyx_PyObject_GetSlot(o, tp_finalize, destructor)) && !__Pyx_PyObject_GC_IsFinalized(o)) { if (__Pyx_PyObject_GetSlot(o, tp_dealloc, destructor) == __pyx_tp_dealloc_5pysam_9libctabix_Parser) { if (PyObject_CallFinalizerFromDealloc(o)) return; } } #endif PyObject_GC_UnTrack(o); Py_CLEAR(p->encoding); #if CYTHON_USE_TYPE_SLOTS || CYTHON_COMPILING_IN_PYPY (*Py_TYPE(o)->tp_free)(o); #else { freefunc tp_free = (freefunc)PyType_GetSlot(Py_TYPE(o), Py_tp_free); if (tp_free) tp_free(o); } #endif } static int __pyx_tp_traverse_5pysam_9libctabix_Parser(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_5pysam_9libctabix_Parser *p = (struct __pyx_obj_5pysam_9libctabix_Parser *)o; if (p->encoding) { e = (*v)(p->encoding, a); if (e) return e; } return 0; } static int __pyx_tp_clear_5pysam_9libctabix_Parser(PyObject *o) { PyObject* tmp; struct __pyx_obj_5pysam_9libctabix_Parser *p = (struct __pyx_obj_5pysam_9libctabix_Parser *)o; tmp = ((PyObject*)p->encoding); p->encoding = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyMethodDef __pyx_methods_5pysam_9libctabix_Parser[] = { {"set_encoding", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_6Parser_3set_encoding, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_6Parser_2set_encoding}, {"get_encoding", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_6Parser_5get_encoding, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_6Parser_4get_encoding}, {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_6Parser_9__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_6Parser_8__reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_6Parser_11__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_6Parser_10__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_Parser_slots[] = { {Py_tp_dealloc, (void *)__pyx_tp_dealloc_5pysam_9libctabix_Parser}, {Py_tp_call, (void *)__pyx_pw_5pysam_9libctabix_6Parser_7__call__}, {Py_tp_doc, (void *)PyDoc_STR("Parser(encoding=u'ascii')")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_Parser}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_Parser}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_Parser}, {Py_tp_init, (void *)__pyx_pw_5pysam_9libctabix_6Parser_1__init__}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_Parser}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_Parser_spec = { "pysam.libctabix.Parser", sizeof(struct __pyx_obj_5pysam_9libctabix_Parser), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_Parser_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_Parser = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""Parser", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_Parser), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_Parser, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ __pyx_pw_5pysam_9libctabix_6Parser_7__call__, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("Parser(encoding=u'ascii')"), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_Parser, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_Parser, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_Parser, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif __pyx_pw_5pysam_9libctabix_6Parser_1__init__, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_Parser, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_asTuple __pyx_vtable_5pysam_9libctabix_asTuple; static PyObject *__pyx_tp_new_5pysam_9libctabix_asTuple(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_asTuple *p; PyObject *o = __pyx_tp_new_5pysam_9libctabix_Parser(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_5pysam_9libctabix_asTuple *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_5pysam_9libctabix_Parser*)__pyx_vtabptr_5pysam_9libctabix_asTuple; return o; } static PyMethodDef __pyx_methods_5pysam_9libctabix_asTuple[] = { {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_7asTuple_1__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_7asTuple___reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_7asTuple_3__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_7asTuple_2__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_asTuple_slots[] = { {Py_tp_doc, (void *)PyDoc_STR("converts a :term:`tabix row` into a python tuple.\n\n A field in a row is accessed by numeric index.\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_Parser}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_Parser}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_asTuple}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_asTuple}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_asTuple_spec = { "pysam.libctabix.asTuple", sizeof(struct __pyx_obj_5pysam_9libctabix_asTuple), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_asTuple_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_asTuple = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""asTuple", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_asTuple), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_Parser, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_7__call__, /*tp_call*/ #else 0, /*tp_call*/ #endif 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("converts a :term:`tabix row` into a python tuple.\n\n A field in a row is accessed by numeric index.\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_Parser, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_Parser, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_asTuple, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_1__init__, /*tp_init*/ #else 0, /*tp_init*/ #endif 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_asTuple, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_asGTF __pyx_vtable_5pysam_9libctabix_asGTF; static PyObject *__pyx_tp_new_5pysam_9libctabix_asGTF(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_asGTF *p; PyObject *o = __pyx_tp_new_5pysam_9libctabix_Parser(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_5pysam_9libctabix_asGTF *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_5pysam_9libctabix_Parser*)__pyx_vtabptr_5pysam_9libctabix_asGTF; return o; } static PyMethodDef __pyx_methods_5pysam_9libctabix_asGTF[] = { {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_5asGTF_1__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_5asGTF___reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_5asGTF_3__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_5asGTF_2__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_asGTF_slots[] = { {Py_tp_doc, (void *)PyDoc_STR("converts a :term:`tabix row` into a GTF record with the following\n fields:\n \n +----------+----------+-------------------------------+\n |*Column* |*Name* |*Content* |\n +----------+----------+-------------------------------+\n |1 |contig |the chromosome name |\n +----------+----------+-------------------------------+\n |2 |feature |The feature type |\n +----------+----------+-------------------------------+\n |3 |source |The feature source |\n +----------+----------+-------------------------------+\n |4 |start |genomic start coordinate |\n | | |(0-based) |\n +----------+----------+-------------------------------+\n |5 |end |genomic end coordinate |\n | | |(0-based) |\n +----------+----------+-------------------------------+\n |6 |score |feature score |\n +----------+----------+-------------------------------+\n |7 |strand |strand |\n +----------+----------+-------------------------------+\n |8 |frame |frame |\n +----------+----------+-------------------------------+\n |9 |attributes|the attribute field |\n +----------+----------+-------------------------------+\n\n GTF formatted entries also define the following fields that\n are derived from the attributes field:\n\n +--------------------+------------------------------+\n |*Name* |*Content* |\n +--------------------+------------------------------+\n |gene_id |the gene identifier |\n +--------------------+------------------------------+\n |transcript_id |the transcript identifier |\n +--------------------+-------------------""-----------+\n\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_Parser}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_Parser}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_asGTF}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_asGTF}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_asGTF_spec = { "pysam.libctabix.asGTF", sizeof(struct __pyx_obj_5pysam_9libctabix_asGTF), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_asGTF_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_asGTF = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""asGTF", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_asGTF), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_Parser, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_7__call__, /*tp_call*/ #else 0, /*tp_call*/ #endif 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("converts a :term:`tabix row` into a GTF record with the following\n fields:\n \n +----------+----------+-------------------------------+\n |*Column* |*Name* |*Content* |\n +----------+----------+-------------------------------+\n |1 |contig |the chromosome name |\n +----------+----------+-------------------------------+\n |2 |feature |The feature type |\n +----------+----------+-------------------------------+\n |3 |source |The feature source |\n +----------+----------+-------------------------------+\n |4 |start |genomic start coordinate |\n | | |(0-based) |\n +----------+----------+-------------------------------+\n |5 |end |genomic end coordinate |\n | | |(0-based) |\n +----------+----------+-------------------------------+\n |6 |score |feature score |\n +----------+----------+-------------------------------+\n |7 |strand |strand |\n +----------+----------+-------------------------------+\n |8 |frame |frame |\n +----------+----------+-------------------------------+\n |9 |attributes|the attribute field |\n +----------+----------+-------------------------------+\n\n GTF formatted entries also define the following fields that\n are derived from the attributes field:\n\n +--------------------+------------------------------+\n |*Name* |*Content* |\n +--------------------+------------------------------+\n |gene_id |the gene identifier |\n +--------------------+------------------------------+\n |transcript_id |the transcript identifier |\n +--------------------+-------------------""-----------+\n\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_Parser, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_Parser, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_asGTF, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_1__init__, /*tp_init*/ #else 0, /*tp_init*/ #endif 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_asGTF, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_asGFF3 __pyx_vtable_5pysam_9libctabix_asGFF3; static PyObject *__pyx_tp_new_5pysam_9libctabix_asGFF3(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_asGFF3 *p; PyObject *o = __pyx_tp_new_5pysam_9libctabix_Parser(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_5pysam_9libctabix_asGFF3 *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_5pysam_9libctabix_Parser*)__pyx_vtabptr_5pysam_9libctabix_asGFF3; return o; } static PyMethodDef __pyx_methods_5pysam_9libctabix_asGFF3[] = { {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_6asGFF3_1__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_6asGFF3___reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_6asGFF3_3__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_6asGFF3_2__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_asGFF3_slots[] = { {Py_tp_doc, (void *)PyDoc_STR("converts a :term:`tabix row` into a GFF record with the following\n fields:\n \n +----------+----------+-------------------------------+\n |*Column* |*Name* |*Content* |\n +----------+----------+-------------------------------+\n |1 |contig |the chromosome name |\n +----------+----------+-------------------------------+\n |2 |feature |The feature type |\n +----------+----------+-------------------------------+\n |3 |source |The feature source |\n +----------+----------+-------------------------------+\n |4 |start |genomic start coordinate |\n | | |(0-based) |\n +----------+----------+-------------------------------+\n |5 |end |genomic end coordinate |\n | | |(0-based) |\n +----------+----------+-------------------------------+\n |6 |score |feature score |\n +----------+----------+-------------------------------+\n |7 |strand |strand |\n +----------+----------+-------------------------------+\n |8 |frame |frame |\n +----------+----------+-------------------------------+\n |9 |attributes|the attribute field |\n +----------+----------+-------------------------------+\n\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_Parser}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_Parser}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_asGFF3}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_asGFF3}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_asGFF3_spec = { "pysam.libctabix.asGFF3", sizeof(struct __pyx_obj_5pysam_9libctabix_asGFF3), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_asGFF3_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_asGFF3 = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""asGFF3", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_asGFF3), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_Parser, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_7__call__, /*tp_call*/ #else 0, /*tp_call*/ #endif 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("converts a :term:`tabix row` into a GFF record with the following\n fields:\n \n +----------+----------+-------------------------------+\n |*Column* |*Name* |*Content* |\n +----------+----------+-------------------------------+\n |1 |contig |the chromosome name |\n +----------+----------+-------------------------------+\n |2 |feature |The feature type |\n +----------+----------+-------------------------------+\n |3 |source |The feature source |\n +----------+----------+-------------------------------+\n |4 |start |genomic start coordinate |\n | | |(0-based) |\n +----------+----------+-------------------------------+\n |5 |end |genomic end coordinate |\n | | |(0-based) |\n +----------+----------+-------------------------------+\n |6 |score |feature score |\n +----------+----------+-------------------------------+\n |7 |strand |strand |\n +----------+----------+-------------------------------+\n |8 |frame |frame |\n +----------+----------+-------------------------------+\n |9 |attributes|the attribute field |\n +----------+----------+-------------------------------+\n\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_Parser, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_Parser, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_asGFF3, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_1__init__, /*tp_init*/ #else 0, /*tp_init*/ #endif 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_asGFF3, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_asBed __pyx_vtable_5pysam_9libctabix_asBed; static PyObject *__pyx_tp_new_5pysam_9libctabix_asBed(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_asBed *p; PyObject *o = __pyx_tp_new_5pysam_9libctabix_Parser(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_5pysam_9libctabix_asBed *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_5pysam_9libctabix_Parser*)__pyx_vtabptr_5pysam_9libctabix_asBed; return o; } static PyMethodDef __pyx_methods_5pysam_9libctabix_asBed[] = { {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_5asBed_1__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_5asBed___reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_5asBed_3__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_5asBed_2__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_asBed_slots[] = { {Py_tp_doc, (void *)PyDoc_STR("converts a :term:`tabix row` into a bed record\n with the following fields:\n\n +-----------+-----------+------------------------------------------+\n |*Column* |*Field* |*Contents* |\n | | | |\n +-----------+-----------+------------------------------------------+\n |1 |contig |contig |\n | | | |\n +-----------+-----------+------------------------------------------+\n |2 |start |genomic start coordinate (zero-based) |\n +-----------+-----------+------------------------------------------+\n |3 |end |genomic end coordinate plus one |\n | | |(zero-based) |\n +-----------+-----------+------------------------------------------+\n |4 |name |name of feature. |\n +-----------+-----------+------------------------------------------+\n |5 |score |score of feature |\n +-----------+-----------+------------------------------------------+\n |6 |strand |strand of feature |\n +-----------+-----------+------------------------------------------+\n |7 |thickStart |thickStart |\n +-----------+-----------+------------------------------------------+\n |8 |thickEnd |thickEnd |\n +-----------+-----------+------------------------------------------+\n |9 |itemRGB |itemRGB |\n +-----------+-----------+------------------------------------------+\n |10 |blockCount |number of bocks |\n +-----------+-----------+---------------------------------------""---+\n |11 |blockSizes |',' separated string of block sizes |\n +-----------+-----------+------------------------------------------+\n |12 |blockStarts|',' separated string of block genomic |\n | | |start positions |\n +-----------+-----------+------------------------------------------+\n\n Only the first three fields are required. Additional\n fields are optional, but if one is defined, all the preceding\n need to be defined as well.\n\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_Parser}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_Parser}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_asBed}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_asBed}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_asBed_spec = { "pysam.libctabix.asBed", sizeof(struct __pyx_obj_5pysam_9libctabix_asBed), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_asBed_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_asBed = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""asBed", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_asBed), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_Parser, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_7__call__, /*tp_call*/ #else 0, /*tp_call*/ #endif 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("converts a :term:`tabix row` into a bed record\n with the following fields:\n\n +-----------+-----------+------------------------------------------+\n |*Column* |*Field* |*Contents* |\n | | | |\n +-----------+-----------+------------------------------------------+\n |1 |contig |contig |\n | | | |\n +-----------+-----------+------------------------------------------+\n |2 |start |genomic start coordinate (zero-based) |\n +-----------+-----------+------------------------------------------+\n |3 |end |genomic end coordinate plus one |\n | | |(zero-based) |\n +-----------+-----------+------------------------------------------+\n |4 |name |name of feature. |\n +-----------+-----------+------------------------------------------+\n |5 |score |score of feature |\n +-----------+-----------+------------------------------------------+\n |6 |strand |strand of feature |\n +-----------+-----------+------------------------------------------+\n |7 |thickStart |thickStart |\n +-----------+-----------+------------------------------------------+\n |8 |thickEnd |thickEnd |\n +-----------+-----------+------------------------------------------+\n |9 |itemRGB |itemRGB |\n +-----------+-----------+------------------------------------------+\n |10 |blockCount |number of bocks |\n +-----------+-----------+---------------------------------------""---+\n |11 |blockSizes |',' separated string of block sizes |\n +-----------+-----------+------------------------------------------+\n |12 |blockStarts|',' separated string of block genomic |\n | | |start positions |\n +-----------+-----------+------------------------------------------+\n\n Only the first three fields are required. Additional\n fields are optional, but if one is defined, all the preceding\n need to be defined as well.\n\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_Parser, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_Parser, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_asBed, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_1__init__, /*tp_init*/ #else 0, /*tp_init*/ #endif 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_asBed, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_asVCF __pyx_vtable_5pysam_9libctabix_asVCF; static PyObject *__pyx_tp_new_5pysam_9libctabix_asVCF(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_asVCF *p; PyObject *o = __pyx_tp_new_5pysam_9libctabix_Parser(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_5pysam_9libctabix_asVCF *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_5pysam_9libctabix_Parser*)__pyx_vtabptr_5pysam_9libctabix_asVCF; return o; } static PyMethodDef __pyx_methods_5pysam_9libctabix_asVCF[] = { {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_5asVCF_1__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_5asVCF___reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_5asVCF_3__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_5asVCF_2__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_asVCF_slots[] = { {Py_tp_doc, (void *)PyDoc_STR("converts a :term:`tabix row` into a VCF record with\n the following fields:\n \n +----------+---------+------------------------------------+\n |*Column* |*Field* |*Contents* |\n | | | |\n +----------+---------+------------------------------------+\n |1 |contig |chromosome |\n +----------+---------+------------------------------------+\n |2 |pos |chromosomal position, zero-based |\n +----------+---------+------------------------------------+\n |3 |id |id |\n +----------+---------+------------------------------------+\n |4 |ref |reference allele |\n +----------+---------+------------------------------------+\n |5 |alt |alternate alleles |\n +----------+---------+------------------------------------+\n |6 |qual |quality |\n +----------+---------+------------------------------------+\n |7 |filter |filter |\n +----------+---------+------------------------------------+\n |8 |info |info |\n +----------+---------+------------------------------------+\n |9 |format |format specifier. |\n +----------+---------+------------------------------------+\n\n Access to genotypes is via index::\n\n contig = vcf.contig\n first_sample_genotype = vcf[0]\n second_sample_genotype = vcf[1]\n\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_Parser}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_Parser}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_asVCF}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_asVCF}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_asVCF_spec = { "pysam.libctabix.asVCF", sizeof(struct __pyx_obj_5pysam_9libctabix_asVCF), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_asVCF_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_asVCF = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""asVCF", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_asVCF), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_Parser, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_7__call__, /*tp_call*/ #else 0, /*tp_call*/ #endif 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("converts a :term:`tabix row` into a VCF record with\n the following fields:\n \n +----------+---------+------------------------------------+\n |*Column* |*Field* |*Contents* |\n | | | |\n +----------+---------+------------------------------------+\n |1 |contig |chromosome |\n +----------+---------+------------------------------------+\n |2 |pos |chromosomal position, zero-based |\n +----------+---------+------------------------------------+\n |3 |id |id |\n +----------+---------+------------------------------------+\n |4 |ref |reference allele |\n +----------+---------+------------------------------------+\n |5 |alt |alternate alleles |\n +----------+---------+------------------------------------+\n |6 |qual |quality |\n +----------+---------+------------------------------------+\n |7 |filter |filter |\n +----------+---------+------------------------------------+\n |8 |info |info |\n +----------+---------+------------------------------------+\n |9 |format |format specifier. |\n +----------+---------+------------------------------------+\n\n Access to genotypes is via index::\n\n contig = vcf.contig\n first_sample_genotype = vcf[0]\n second_sample_genotype = vcf[1]\n\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_Parser, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_Parser, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ 0, /*tp_iter*/ 0, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_asVCF, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_6Parser_1__init__, /*tp_init*/ #else 0, /*tp_init*/ #endif 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_asVCF, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_TabixIterator __pyx_vtable_5pysam_9libctabix_TabixIterator; static PyObject *__pyx_tp_new_5pysam_9libctabix_TabixIterator(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { struct __pyx_obj_5pysam_9libctabix_TabixIterator *p; PyObject *o; #if CYTHON_COMPILING_IN_LIMITED_API allocfunc alloc_func = (allocfunc)PyType_GetSlot(t, Py_tp_alloc); o = alloc_func(t, 0); #else if (likely(!__Pyx_PyType_HasFeature(t, Py_TPFLAGS_IS_ABSTRACT))) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; #endif p = ((struct __pyx_obj_5pysam_9libctabix_TabixIterator *)o); p->__pyx_vtab = __pyx_vtabptr_5pysam_9libctabix_TabixIterator; p->tabixfile = ((struct __pyx_obj_5pysam_9libctabix_TabixFile *)Py_None); Py_INCREF(Py_None); p->encoding = Py_None; Py_INCREF(Py_None); return o; } static void __pyx_tp_dealloc_5pysam_9libctabix_TabixIterator(PyObject *o) { struct __pyx_obj_5pysam_9libctabix_TabixIterator *p = (struct __pyx_obj_5pysam_9libctabix_TabixIterator *)o; #if CYTHON_USE_TP_FINALIZE if (unlikely((PY_VERSION_HEX >= 0x03080000 || __Pyx_PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE)) && __Pyx_PyObject_GetSlot(o, tp_finalize, destructor)) && !__Pyx_PyObject_GC_IsFinalized(o)) { if (__Pyx_PyObject_GetSlot(o, tp_dealloc, destructor) == __pyx_tp_dealloc_5pysam_9libctabix_TabixIterator) { if (PyObject_CallFinalizerFromDealloc(o)) return; } } #endif PyObject_GC_UnTrack(o); { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); __Pyx_SET_REFCNT(o, Py_REFCNT(o) + 1); __pyx_pw_5pysam_9libctabix_13TabixIterator_7__dealloc__(o); __Pyx_SET_REFCNT(o, Py_REFCNT(o) - 1); PyErr_Restore(etype, eval, etb); } Py_CLEAR(p->tabixfile); Py_CLEAR(p->encoding); #if CYTHON_USE_TYPE_SLOTS || CYTHON_COMPILING_IN_PYPY (*Py_TYPE(o)->tp_free)(o); #else { freefunc tp_free = (freefunc)PyType_GetSlot(Py_TYPE(o), Py_tp_free); if (tp_free) tp_free(o); } #endif } static int __pyx_tp_traverse_5pysam_9libctabix_TabixIterator(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_5pysam_9libctabix_TabixIterator *p = (struct __pyx_obj_5pysam_9libctabix_TabixIterator *)o; if (p->tabixfile) { e = (*v)(((PyObject *)p->tabixfile), a); if (e) return e; } if (p->encoding) { e = (*v)(p->encoding, a); if (e) return e; } return 0; } static int __pyx_tp_clear_5pysam_9libctabix_TabixIterator(PyObject *o) { PyObject* tmp; struct __pyx_obj_5pysam_9libctabix_TabixIterator *p = (struct __pyx_obj_5pysam_9libctabix_TabixIterator *)o; tmp = ((PyObject*)p->tabixfile); p->tabixfile = ((struct __pyx_obj_5pysam_9libctabix_TabixFile *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->encoding); p->encoding = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_specialmethod___pyx_pw_5pysam_9libctabix_13TabixIterator_5__next__(PyObject *self, CYTHON_UNUSED PyObject *arg) { PyObject *res = __pyx_pw_5pysam_9libctabix_13TabixIterator_5__next__(self); if (!res && !PyErr_Occurred()) { PyErr_SetNone(PyExc_StopIteration); } return res; } static PyMethodDef __pyx_methods_5pysam_9libctabix_TabixIterator[] = { {"__next__", (PyCFunction)__pyx_specialmethod___pyx_pw_5pysam_9libctabix_13TabixIterator_5__next__, METH_NOARGS|METH_COEXIST, __pyx_doc_5pysam_9libctabix_13TabixIterator_4__next__}, {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_13TabixIterator_9__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_13TabixIterator_8__reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_13TabixIterator_11__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_13TabixIterator_10__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_TabixIterator_slots[] = { {Py_tp_dealloc, (void *)__pyx_tp_dealloc_5pysam_9libctabix_TabixIterator}, {Py_tp_doc, (void *)PyDoc_STR("TabixIterator(encoding=u'ascii')\niterates over rows in *tabixfile* in region\n given by *tid*, *start* and *end*.\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_TabixIterator}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_TabixIterator}, {Py_tp_iter, (void *)__pyx_pw_5pysam_9libctabix_13TabixIterator_3__iter__}, {Py_tp_iternext, (void *)__pyx_pw_5pysam_9libctabix_13TabixIterator_5__next__}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_TabixIterator}, {Py_tp_init, (void *)__pyx_pw_5pysam_9libctabix_13TabixIterator_1__init__}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_TabixIterator}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_TabixIterator_spec = { "pysam.libctabix.TabixIterator", sizeof(struct __pyx_obj_5pysam_9libctabix_TabixIterator), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_TabixIterator_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_TabixIterator = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""TabixIterator", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_TabixIterator), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_TabixIterator, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("TabixIterator(encoding=u'ascii')\niterates over rows in *tabixfile* in region\n given by *tid*, *start* and *end*.\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_TabixIterator, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_TabixIterator, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ __pyx_pw_5pysam_9libctabix_13TabixIterator_3__iter__, /*tp_iter*/ __pyx_pw_5pysam_9libctabix_13TabixIterator_5__next__, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_TabixIterator, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif __pyx_pw_5pysam_9libctabix_13TabixIterator_1__init__, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_TabixIterator, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_TabixIteratorParsed __pyx_vtable_5pysam_9libctabix_TabixIteratorParsed; static PyObject *__pyx_tp_new_5pysam_9libctabix_TabixIteratorParsed(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *p; PyObject *o = __pyx_tp_new_5pysam_9libctabix_TabixIterator(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_5pysam_9libctabix_TabixIterator*)__pyx_vtabptr_5pysam_9libctabix_TabixIteratorParsed; p->parser = ((struct __pyx_obj_5pysam_9libctabix_Parser *)Py_None); Py_INCREF(Py_None); return o; } static void __pyx_tp_dealloc_5pysam_9libctabix_TabixIteratorParsed(PyObject *o) { struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *p = (struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *)o; #if CYTHON_USE_TP_FINALIZE if (unlikely((PY_VERSION_HEX >= 0x03080000 || __Pyx_PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE)) && __Pyx_PyObject_GetSlot(o, tp_finalize, destructor)) && !__Pyx_PyObject_GC_IsFinalized(o)) { if (__Pyx_PyObject_GetSlot(o, tp_dealloc, destructor) == __pyx_tp_dealloc_5pysam_9libctabix_TabixIteratorParsed) { if (PyObject_CallFinalizerFromDealloc(o)) return; } } #endif PyObject_GC_UnTrack(o); Py_CLEAR(p->parser); PyObject_GC_Track(o); __pyx_tp_dealloc_5pysam_9libctabix_TabixIterator(o); } static int __pyx_tp_traverse_5pysam_9libctabix_TabixIteratorParsed(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *p = (struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *)o; e = __pyx_tp_traverse_5pysam_9libctabix_TabixIterator(o, v, a); if (e) return e; if (p->parser) { e = (*v)(((PyObject *)p->parser), a); if (e) return e; } return 0; } static int __pyx_tp_clear_5pysam_9libctabix_TabixIteratorParsed(PyObject *o) { PyObject* tmp; struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *p = (struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed *)o; __pyx_tp_clear_5pysam_9libctabix_TabixIterator(o); tmp = ((PyObject*)p->parser); p->parser = ((struct __pyx_obj_5pysam_9libctabix_Parser *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_specialmethod___pyx_pw_5pysam_9libctabix_19TabixIteratorParsed_3__next__(PyObject *self, CYTHON_UNUSED PyObject *arg) { PyObject *res = __pyx_pw_5pysam_9libctabix_19TabixIteratorParsed_3__next__(self); if (!res && !PyErr_Occurred()) { PyErr_SetNone(PyExc_StopIteration); } return res; } static PyMethodDef __pyx_methods_5pysam_9libctabix_TabixIteratorParsed[] = { {"__next__", (PyCFunction)__pyx_specialmethod___pyx_pw_5pysam_9libctabix_19TabixIteratorParsed_3__next__, METH_NOARGS|METH_COEXIST, __pyx_doc_5pysam_9libctabix_19TabixIteratorParsed_2__next__}, {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_19TabixIteratorParsed_5__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_19TabixIteratorParsed_4__reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_19TabixIteratorParsed_7__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_19TabixIteratorParsed_6__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_TabixIteratorParsed_slots[] = { {Py_tp_dealloc, (void *)__pyx_tp_dealloc_5pysam_9libctabix_TabixIteratorParsed}, {Py_tp_doc, (void *)PyDoc_STR("TabixIteratorParsed(Parser parser)\niterates over mapped reads in a region.\n\n The *parser* determines the encoding.\n\n Returns parsed data.\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_TabixIteratorParsed}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_TabixIteratorParsed}, {Py_tp_iternext, (void *)__pyx_pw_5pysam_9libctabix_19TabixIteratorParsed_3__next__}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_TabixIteratorParsed}, {Py_tp_init, (void *)__pyx_pw_5pysam_9libctabix_19TabixIteratorParsed_1__init__}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_TabixIteratorParsed}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_TabixIteratorParsed_spec = { "pysam.libctabix.TabixIteratorParsed", sizeof(struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_TabixIteratorParsed_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_TabixIteratorParsed = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""TabixIteratorParsed", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_TabixIteratorParsed), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_TabixIteratorParsed, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("TabixIteratorParsed(Parser parser)\niterates over mapped reads in a region.\n\n The *parser* determines the encoding.\n\n Returns parsed data.\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_TabixIteratorParsed, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_TabixIteratorParsed, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_13TabixIterator_3__iter__, /*tp_iter*/ #else 0, /*tp_iter*/ #endif __pyx_pw_5pysam_9libctabix_19TabixIteratorParsed_3__next__, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_TabixIteratorParsed, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif __pyx_pw_5pysam_9libctabix_19TabixIteratorParsed_1__init__, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_TabixIteratorParsed, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_GZIterator __pyx_vtable_5pysam_9libctabix_GZIterator; static PyObject *__pyx_tp_new_5pysam_9libctabix_GZIterator(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { struct __pyx_obj_5pysam_9libctabix_GZIterator *p; PyObject *o; #if CYTHON_COMPILING_IN_LIMITED_API allocfunc alloc_func = (allocfunc)PyType_GetSlot(t, Py_tp_alloc); o = alloc_func(t, 0); #else if (likely(!__Pyx_PyType_HasFeature(t, Py_TPFLAGS_IS_ABSTRACT))) { o = (*t->tp_alloc)(t, 0); } else { o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0); } if (unlikely(!o)) return 0; #endif p = ((struct __pyx_obj_5pysam_9libctabix_GZIterator *)o); p->__pyx_vtab = __pyx_vtabptr_5pysam_9libctabix_GZIterator; p->_filename = Py_None; Py_INCREF(Py_None); p->encoding = Py_None; Py_INCREF(Py_None); return o; } static void __pyx_tp_dealloc_5pysam_9libctabix_GZIterator(PyObject *o) { struct __pyx_obj_5pysam_9libctabix_GZIterator *p = (struct __pyx_obj_5pysam_9libctabix_GZIterator *)o; #if CYTHON_USE_TP_FINALIZE if (unlikely((PY_VERSION_HEX >= 0x03080000 || __Pyx_PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE)) && __Pyx_PyObject_GetSlot(o, tp_finalize, destructor)) && !__Pyx_PyObject_GC_IsFinalized(o)) { if (__Pyx_PyObject_GetSlot(o, tp_dealloc, destructor) == __pyx_tp_dealloc_5pysam_9libctabix_GZIterator) { if (PyObject_CallFinalizerFromDealloc(o)) return; } } #endif PyObject_GC_UnTrack(o); { PyObject *etype, *eval, *etb; PyErr_Fetch(&etype, &eval, &etb); __Pyx_SET_REFCNT(o, Py_REFCNT(o) + 1); __pyx_pw_5pysam_9libctabix_10GZIterator_3__dealloc__(o); __Pyx_SET_REFCNT(o, Py_REFCNT(o) - 1); PyErr_Restore(etype, eval, etb); } Py_CLEAR(p->_filename); Py_CLEAR(p->encoding); #if CYTHON_USE_TYPE_SLOTS || CYTHON_COMPILING_IN_PYPY (*Py_TYPE(o)->tp_free)(o); #else { freefunc tp_free = (freefunc)PyType_GetSlot(Py_TYPE(o), Py_tp_free); if (tp_free) tp_free(o); } #endif } static int __pyx_tp_traverse_5pysam_9libctabix_GZIterator(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_5pysam_9libctabix_GZIterator *p = (struct __pyx_obj_5pysam_9libctabix_GZIterator *)o; if (p->_filename) { e = (*v)(p->_filename, a); if (e) return e; } if (p->encoding) { e = (*v)(p->encoding, a); if (e) return e; } return 0; } static int __pyx_tp_clear_5pysam_9libctabix_GZIterator(PyObject *o) { PyObject* tmp; struct __pyx_obj_5pysam_9libctabix_GZIterator *p = (struct __pyx_obj_5pysam_9libctabix_GZIterator *)o; tmp = ((PyObject*)p->_filename); p->_filename = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); tmp = ((PyObject*)p->encoding); p->encoding = Py_None; Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_specialmethod___pyx_pw_5pysam_9libctabix_10GZIterator_7__next__(PyObject *self, CYTHON_UNUSED PyObject *arg) { PyObject *res = __pyx_pw_5pysam_9libctabix_10GZIterator_7__next__(self); if (!res && !PyErr_Occurred()) { PyErr_SetNone(PyExc_StopIteration); } return res; } static PyMethodDef __pyx_methods_5pysam_9libctabix_GZIterator[] = { {"__next__", (PyCFunction)__pyx_specialmethod___pyx_pw_5pysam_9libctabix_10GZIterator_7__next__, METH_NOARGS|METH_COEXIST, __pyx_doc_5pysam_9libctabix_10GZIterator_6__next__}, {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_10GZIterator_9__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_10GZIterator_8__reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_10GZIterator_11__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_10GZIterator_10__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_GZIterator_slots[] = { {Py_tp_dealloc, (void *)__pyx_tp_dealloc_5pysam_9libctabix_GZIterator}, {Py_tp_doc, (void *)PyDoc_STR("GZIterator(filename, int buffer_size=65536, encoding=u'ascii')")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_GZIterator}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_GZIterator}, {Py_tp_iter, (void *)__pyx_pw_5pysam_9libctabix_10GZIterator_5__iter__}, {Py_tp_iternext, (void *)__pyx_pw_5pysam_9libctabix_10GZIterator_7__next__}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_GZIterator}, {Py_tp_init, (void *)__pyx_pw_5pysam_9libctabix_10GZIterator_1__init__}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_GZIterator}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_GZIterator_spec = { "pysam.libctabix.GZIterator", sizeof(struct __pyx_obj_5pysam_9libctabix_GZIterator), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_GZIterator_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_GZIterator = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""GZIterator", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_GZIterator), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_GZIterator, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("GZIterator(filename, int buffer_size=65536, encoding=u'ascii')"), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_GZIterator, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_GZIterator, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ __pyx_pw_5pysam_9libctabix_10GZIterator_5__iter__, /*tp_iter*/ __pyx_pw_5pysam_9libctabix_10GZIterator_7__next__, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_GZIterator, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif __pyx_pw_5pysam_9libctabix_10GZIterator_1__init__, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_GZIterator, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_GZIteratorHead __pyx_vtable_5pysam_9libctabix_GZIteratorHead; static PyObject *__pyx_tp_new_5pysam_9libctabix_GZIteratorHead(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_GZIteratorHead *p; PyObject *o = __pyx_tp_new_5pysam_9libctabix_GZIterator(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_5pysam_9libctabix_GZIteratorHead *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_5pysam_9libctabix_GZIterator*)__pyx_vtabptr_5pysam_9libctabix_GZIteratorHead; return o; } static PyObject *__pyx_specialmethod___pyx_pw_5pysam_9libctabix_14GZIteratorHead_1__next__(PyObject *self, CYTHON_UNUSED PyObject *arg) { PyObject *res = __pyx_pw_5pysam_9libctabix_14GZIteratorHead_1__next__(self); if (!res && !PyErr_Occurred()) { PyErr_SetNone(PyExc_StopIteration); } return res; } static PyMethodDef __pyx_methods_5pysam_9libctabix_GZIteratorHead[] = { {"__next__", (PyCFunction)__pyx_specialmethod___pyx_pw_5pysam_9libctabix_14GZIteratorHead_1__next__, METH_NOARGS|METH_COEXIST, __pyx_doc_5pysam_9libctabix_14GZIteratorHead___next__}, {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_14GZIteratorHead_3__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_14GZIteratorHead_2__reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_14GZIteratorHead_5__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_14GZIteratorHead_4__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_GZIteratorHead_slots[] = { {Py_tp_doc, (void *)PyDoc_STR("iterate line-by-line through gzip (or bgzip)\n compressed file returning comments at top of file.\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_GZIterator}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_GZIterator}, {Py_tp_iternext, (void *)__pyx_pw_5pysam_9libctabix_14GZIteratorHead_1__next__}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_GZIteratorHead}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_GZIteratorHead}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_GZIteratorHead_spec = { "pysam.libctabix.GZIteratorHead", sizeof(struct __pyx_obj_5pysam_9libctabix_GZIteratorHead), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_GZIteratorHead_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_GZIteratorHead = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""GZIteratorHead", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_GZIteratorHead), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_GZIterator, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("iterate line-by-line through gzip (or bgzip)\n compressed file returning comments at top of file.\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_GZIterator, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_GZIterator, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_10GZIterator_5__iter__, /*tp_iter*/ #else 0, /*tp_iter*/ #endif __pyx_pw_5pysam_9libctabix_14GZIteratorHead_1__next__, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_GZIteratorHead, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_10GZIterator_1__init__, /*tp_init*/ #else 0, /*tp_init*/ #endif 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_GZIteratorHead, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if CYTHON_USE_TP_FINALIZE 0, /*tp_finalize*/ #else NULL, /*tp_finalize*/ #endif #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, /*tp_vectorcall*/ #endif #if __PYX_NEED_TP_PRINT_SLOT == 1 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030C0000 0, /*tp_watched*/ #endif #if PY_VERSION_HEX >= 0x030d00A4 0, /*tp_versions_used*/ #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, /*tp_pypy_flags*/ #endif }; #endif static struct __pyx_vtabstruct_5pysam_9libctabix_GZIteratorParsed __pyx_vtable_5pysam_9libctabix_GZIteratorParsed; static PyObject *__pyx_tp_new_5pysam_9libctabix_GZIteratorParsed(PyTypeObject *t, PyObject *a, PyObject *k) { struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *p; PyObject *o = __pyx_tp_new_5pysam_9libctabix_GZIterator(t, a, k); if (unlikely(!o)) return 0; p = ((struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *)o); p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_5pysam_9libctabix_GZIterator*)__pyx_vtabptr_5pysam_9libctabix_GZIteratorParsed; p->parser = ((struct __pyx_obj_5pysam_9libctabix_Parser *)Py_None); Py_INCREF(Py_None); return o; } static void __pyx_tp_dealloc_5pysam_9libctabix_GZIteratorParsed(PyObject *o) { struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *p = (struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *)o; #if CYTHON_USE_TP_FINALIZE if (unlikely((PY_VERSION_HEX >= 0x03080000 || __Pyx_PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE)) && __Pyx_PyObject_GetSlot(o, tp_finalize, destructor)) && !__Pyx_PyObject_GC_IsFinalized(o)) { if (__Pyx_PyObject_GetSlot(o, tp_dealloc, destructor) == __pyx_tp_dealloc_5pysam_9libctabix_GZIteratorParsed) { if (PyObject_CallFinalizerFromDealloc(o)) return; } } #endif PyObject_GC_UnTrack(o); Py_CLEAR(p->parser); PyObject_GC_Track(o); __pyx_tp_dealloc_5pysam_9libctabix_GZIterator(o); } static int __pyx_tp_traverse_5pysam_9libctabix_GZIteratorParsed(PyObject *o, visitproc v, void *a) { int e; struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *p = (struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *)o; e = __pyx_tp_traverse_5pysam_9libctabix_GZIterator(o, v, a); if (e) return e; if (p->parser) { e = (*v)(((PyObject *)p->parser), a); if (e) return e; } return 0; } static int __pyx_tp_clear_5pysam_9libctabix_GZIteratorParsed(PyObject *o) { PyObject* tmp; struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *p = (struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed *)o; __pyx_tp_clear_5pysam_9libctabix_GZIterator(o); tmp = ((PyObject*)p->parser); p->parser = ((struct __pyx_obj_5pysam_9libctabix_Parser *)Py_None); Py_INCREF(Py_None); Py_XDECREF(tmp); return 0; } static PyObject *__pyx_specialmethod___pyx_pw_5pysam_9libctabix_16GZIteratorParsed_3__next__(PyObject *self, CYTHON_UNUSED PyObject *arg) { PyObject *res = __pyx_pw_5pysam_9libctabix_16GZIteratorParsed_3__next__(self); if (!res && !PyErr_Occurred()) { PyErr_SetNone(PyExc_StopIteration); } return res; } static PyMethodDef __pyx_methods_5pysam_9libctabix_GZIteratorParsed[] = { {"__next__", (PyCFunction)__pyx_specialmethod___pyx_pw_5pysam_9libctabix_16GZIteratorParsed_3__next__, METH_NOARGS|METH_COEXIST, __pyx_doc_5pysam_9libctabix_16GZIteratorParsed_2__next__}, {"__reduce_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_16GZIteratorParsed_5__reduce_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_16GZIteratorParsed_4__reduce_cython__}, {"__setstate_cython__", (PyCFunction)(void*)(__Pyx_PyCFunction_FastCallWithKeywords)__pyx_pw_5pysam_9libctabix_16GZIteratorParsed_7__setstate_cython__, __Pyx_METH_FASTCALL|METH_KEYWORDS, __pyx_doc_5pysam_9libctabix_16GZIteratorParsed_6__setstate_cython__}, {0, 0, 0, 0} }; #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_type_5pysam_9libctabix_GZIteratorParsed_slots[] = { {Py_tp_dealloc, (void *)__pyx_tp_dealloc_5pysam_9libctabix_GZIteratorParsed}, {Py_tp_doc, (void *)PyDoc_STR("GZIteratorParsed(parser)\niterate line-by-line through gzip (or bgzip)\n compressed file returning comments at top of file.\n ")}, {Py_tp_traverse, (void *)__pyx_tp_traverse_5pysam_9libctabix_GZIteratorParsed}, {Py_tp_clear, (void *)__pyx_tp_clear_5pysam_9libctabix_GZIteratorParsed}, {Py_tp_iternext, (void *)__pyx_pw_5pysam_9libctabix_16GZIteratorParsed_3__next__}, {Py_tp_methods, (void *)__pyx_methods_5pysam_9libctabix_GZIteratorParsed}, {Py_tp_init, (void *)__pyx_pw_5pysam_9libctabix_16GZIteratorParsed_1__init__}, {Py_tp_new, (void *)__pyx_tp_new_5pysam_9libctabix_GZIteratorParsed}, {0, 0}, }; static PyType_Spec __pyx_type_5pysam_9libctabix_GZIteratorParsed_spec = { "pysam.libctabix.GZIteratorParsed", sizeof(struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed), 0, Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, __pyx_type_5pysam_9libctabix_GZIteratorParsed_slots, }; #else static PyTypeObject __pyx_type_5pysam_9libctabix_GZIteratorParsed = { PyVarObject_HEAD_INIT(0, 0) "pysam.libctabix.""GZIteratorParsed", /*tp_name*/ sizeof(struct __pyx_obj_5pysam_9libctabix_GZIteratorParsed), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_5pysam_9libctabix_GZIteratorParsed, /*tp_dealloc*/ #if PY_VERSION_HEX < 0x030800b4 0, /*tp_print*/ #endif #if PY_VERSION_HEX >= 0x030800b4 0, /*tp_vectorcall_offset*/ #endif 0, /*tp_getattr*/ 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ #endif #if PY_MAJOR_VERSION >= 3 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ 0, /*tp_as_sequence*/ 0, /*tp_as_mapping*/ 0, /*tp_hash*/ 0, /*tp_call*/ 0, /*tp_str*/ 0, /*tp_getattro*/ 0, /*tp_setattro*/ 0, /*tp_as_buffer*/ Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/ PyDoc_STR("GZIteratorParsed(parser)\niterate line-by-line through gzip (or bgzip)\n compressed file returning comments at top of file.\n "), /*tp_doc*/ __pyx_tp_traverse_5pysam_9libctabix_GZIteratorParsed, /*tp_traverse*/ __pyx_tp_clear_5pysam_9libctabix_GZIteratorParsed, /*tp_clear*/ 0, /*tp_richcompare*/ 0, /*tp_weaklistoffset*/ #if CYTHON_COMPILING_IN_PYPY || 0 __pyx_pw_5pysam_9libctabix_10GZIterator_5__iter__, /*tp_iter*/ #else 0, /*tp_iter*/ #endif __pyx_pw_5pysam_9libctabix_16GZIteratorParsed_3__next__, /*tp_iternext*/ __pyx_methods_5pysam_9libctabix_GZIteratorParsed, /*tp_methods*/ 0, /*tp_members*/ 0, /*tp_getset*/ 0, /*tp_base*/ 0, /*tp_dict*/ 0, /*tp_descr_get*/ 0, /*tp_descr_set*/ #if !CYTHON_USE_TYPE_SPECS 0, /*tp_dictoffset*/ #endif __pyx_pw_5pysam_9libctabix_16GZIteratorParsed_1__init__, /*tp_init*/ 0, /*tp_alloc*/ __pyx_tp_new_5pysam_9libctabix_GZIteratorParsed, /*tp_new*/ 0, /*tp_free*/ 0, /*tp_is_gc*/ 0, /*tp_bases*/ 0, /*tp_mro*/ 0, /*tp_cache*/ 0, /*tp_subclasses*/ 0, /*tp_weaklist*/ 0, /*tp_del*/ 0, /*tp_version_tag*/ #if PY_VERSION_HEX >= 0x030400a1 #if 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(result == 0) : (result != 0); } } else if ((s1 == Py_None) & PyBytes_CheckExact(s2)) { return (equals == Py_NE); } else if ((s2 == Py_None) & PyBytes_CheckExact(s1)) { return (equals == Py_NE); } else { int result; PyObject* py_result = PyObject_RichCompare(s1, s2, equals); if (!py_result) return -1; result = __Pyx_PyObject_IsTrue(py_result); Py_DECREF(py_result); return result; } #endif } /* UnicodeEquals */ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { #if CYTHON_COMPILING_IN_PYPY || CYTHON_COMPILING_IN_LIMITED_API return PyObject_RichCompareBool(s1, s2, equals); #else #if PY_MAJOR_VERSION < 3 PyObject* owned_ref = NULL; #endif int s1_is_unicode, s2_is_unicode; if (s1 == s2) { goto return_eq; } s1_is_unicode = PyUnicode_CheckExact(s1); s2_is_unicode = PyUnicode_CheckExact(s2); #if PY_MAJOR_VERSION < 3 if ((s1_is_unicode & (!s2_is_unicode)) && PyString_CheckExact(s2)) { owned_ref = PyUnicode_FromObject(s2); if (unlikely(!owned_ref)) return -1; s2 = owned_ref; s2_is_unicode = 1; } else if ((s2_is_unicode & (!s1_is_unicode)) && PyString_CheckExact(s1)) { owned_ref = PyUnicode_FromObject(s1); if (unlikely(!owned_ref)) return -1; s1 = owned_ref; s1_is_unicode = 1; } else if (((!s2_is_unicode) & (!s1_is_unicode))) { return __Pyx_PyBytes_Equals(s1, s2, equals); } #endif if (s1_is_unicode & s2_is_unicode) { Py_ssize_t length; int kind; void *data1, *data2; if (unlikely(__Pyx_PyUnicode_READY(s1) < 0) || unlikely(__Pyx_PyUnicode_READY(s2) < 0)) return -1; length = __Pyx_PyUnicode_GET_LENGTH(s1); if (length != __Pyx_PyUnicode_GET_LENGTH(s2)) { goto return_ne; } #if CYTHON_USE_UNICODE_INTERNALS { Py_hash_t hash1, hash2; #if CYTHON_PEP393_ENABLED hash1 = ((PyASCIIObject*)s1)->hash; hash2 = ((PyASCIIObject*)s2)->hash; #else hash1 = ((PyUnicodeObject*)s1)->hash; hash2 = ((PyUnicodeObject*)s2)->hash; #endif if (hash1 != hash2 && hash1 != -1 && hash2 != -1) { goto return_ne; } } #endif kind = __Pyx_PyUnicode_KIND(s1); if (kind != __Pyx_PyUnicode_KIND(s2)) { goto return_ne; } data1 = __Pyx_PyUnicode_DATA(s1); data2 = __Pyx_PyUnicode_DATA(s2); if (__Pyx_PyUnicode_READ(kind, data1, 0) != __Pyx_PyUnicode_READ(kind, data2, 0)) { goto return_ne; } else if (length == 1) { goto return_eq; } else { int result = memcmp(data1, data2, (size_t)(length * kind)); #if PY_MAJOR_VERSION < 3 Py_XDECREF(owned_ref); #endif return (equals == Py_EQ) ? (result == 0) : (result != 0); } } else if ((s1 == Py_None) & s2_is_unicode) { goto return_ne; } else if ((s2 == Py_None) & s1_is_unicode) { goto return_ne; } else { int result; PyObject* py_result = PyObject_RichCompare(s1, s2, equals); #if PY_MAJOR_VERSION < 3 Py_XDECREF(owned_ref); #endif if (!py_result) return -1; result = __Pyx_PyObject_IsTrue(py_result); Py_DECREF(py_result); return result; } return_eq: #if PY_MAJOR_VERSION < 3 Py_XDECREF(owned_ref); #endif return (equals == Py_EQ); return_ne: #if PY_MAJOR_VERSION < 3 Py_XDECREF(owned_ref); #endif return (equals == Py_NE); #endif } /* fastcall */ #if CYTHON_METH_FASTCALL static CYTHON_INLINE PyObject * __Pyx_GetKwValue_FASTCALL(PyObject *kwnames, PyObject *const *kwvalues, PyObject *s) { Py_ssize_t i, n = PyTuple_GET_SIZE(kwnames); for (i = 0; i < n; i++) { if (s == PyTuple_GET_ITEM(kwnames, i)) return kwvalues[i]; } for (i = 0; i < n; i++) { int eq = __Pyx_PyUnicode_Equals(s, PyTuple_GET_ITEM(kwnames, i), Py_EQ); if (unlikely(eq != 0)) { if (unlikely(eq < 0)) return NULL; return kwvalues[i]; } } return NULL; } #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030d0000 CYTHON_UNUSED static PyObject *__Pyx_KwargsAsDict_FASTCALL(PyObject *kwnames, PyObject *const *kwvalues) { Py_ssize_t i, nkwargs = PyTuple_GET_SIZE(kwnames); PyObject *dict; dict = PyDict_New(); if (unlikely(!dict)) return NULL; for (i=0; i<nkwargs; i++) { PyObject *key = PyTuple_GET_ITEM(kwnames, i); if (unlikely(PyDict_SetItem(dict, key, kwvalues[i]) < 0)) goto bad; } return dict; bad: Py_DECREF(dict); return NULL; } #endif #endif /* RaiseDoubleKeywords */ static void __Pyx_RaiseDoubleKeywordsError( const char* func_name, PyObject* kw_name) { PyErr_Format(PyExc_TypeError, #if PY_MAJOR_VERSION >= 3 "%s() got multiple values for keyword argument '%U'", func_name, kw_name); #else "%s() got multiple values for keyword argument '%s'", func_name, PyString_AsString(kw_name)); #endif } /* ParseKeywords */ static int __Pyx_ParseOptionalKeywords( PyObject *kwds, PyObject *const *kwvalues, PyObject **argnames[], PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args, const char* function_name) { PyObject *key = 0, *value = 0; Py_ssize_t pos = 0; PyObject*** name; PyObject*** first_kw_arg = argnames + num_pos_args; int kwds_is_tuple = CYTHON_METH_FASTCALL && likely(PyTuple_Check(kwds)); while (1) { Py_XDECREF(key); key = NULL; Py_XDECREF(value); value = NULL; if (kwds_is_tuple) { Py_ssize_t size; #if CYTHON_ASSUME_SAFE_MACROS size = PyTuple_GET_SIZE(kwds); #else size = PyTuple_Size(kwds); if (size < 0) goto bad; #endif if (pos >= size) break; #if CYTHON_AVOID_BORROWED_REFS key = __Pyx_PySequence_ITEM(kwds, pos); if (!key) goto bad; #elif CYTHON_ASSUME_SAFE_MACROS key = PyTuple_GET_ITEM(kwds, pos); #else key = PyTuple_GetItem(kwds, pos); if (!key) goto bad; #endif value = kwvalues[pos]; pos++; } else { if (!PyDict_Next(kwds, &pos, &key, &value)) break; #if CYTHON_AVOID_BORROWED_REFS Py_INCREF(key); #endif } name = first_kw_arg; while (*name && (**name != key)) name++; if (*name) { values[name-argnames] = value; #if CYTHON_AVOID_BORROWED_REFS Py_INCREF(value); Py_DECREF(key); #endif key = NULL; value = NULL; continue; } #if !CYTHON_AVOID_BORROWED_REFS Py_INCREF(key); #endif Py_INCREF(value); name = first_kw_arg; #if PY_MAJOR_VERSION < 3 if (likely(PyString_Check(key))) { while (*name) { if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key)) && _PyString_Eq(**name, key)) { values[name-argnames] = value; #if CYTHON_AVOID_BORROWED_REFS value = NULL; #endif break; } name++; } if (*name) continue; else { PyObject*** argname = argnames; while (argname != first_kw_arg) { if ((**argname == key) || ( (CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key)) && _PyString_Eq(**argname, key))) { goto arg_passed_twice; } argname++; } } } else #endif if (likely(PyUnicode_Check(key))) { while (*name) { int cmp = ( #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3 (__Pyx_PyUnicode_GET_LENGTH(**name) != __Pyx_PyUnicode_GET_LENGTH(key)) ? 1 : #endif PyUnicode_Compare(**name, key) ); if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad; if (cmp == 0) { values[name-argnames] = value; #if CYTHON_AVOID_BORROWED_REFS value = NULL; #endif break; } name++; } if (*name) continue; else { PyObject*** argname = argnames; while (argname != first_kw_arg) { int cmp = (**argname == key) ? 0 : #if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3 (__Pyx_PyUnicode_GET_LENGTH(**argname) != __Pyx_PyUnicode_GET_LENGTH(key)) ? 1 : #endif PyUnicode_Compare(**argname, key); if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad; if (cmp == 0) goto arg_passed_twice; argname++; } } } else goto invalid_keyword_type; if (kwds2) { if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad; } else { goto invalid_keyword; } } Py_XDECREF(key); Py_XDECREF(value); return 0; arg_passed_twice: __Pyx_RaiseDoubleKeywordsError(function_name, key); goto bad; invalid_keyword_type: PyErr_Format(PyExc_TypeError, "%.200s() keywords must be strings", function_name); goto bad; invalid_keyword: #if PY_MAJOR_VERSION < 3 PyErr_Format(PyExc_TypeError, "%.200s() got an unexpected keyword argument '%.200s'", function_name, PyString_AsString(key)); #else PyErr_Format(PyExc_TypeError, "%s() got an unexpected keyword argument '%U'", function_name, key); #endif bad: Py_XDECREF(key); Py_XDECREF(value); return -1; } /* RaiseArgTupleInvalid */ static void __Pyx_RaiseArgtupleInvalid( const char* func_name, int exact, Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found) { Py_ssize_t num_expected; const char *more_or_less; if (num_found < num_min) { num_expected = num_min; more_or_less = "at least"; } else { num_expected = num_max; more_or_less = "at most"; } if (exact) { more_or_less = "exactly"; } PyErr_Format(PyExc_TypeError, "%.200s() takes %.8s %" CYTHON_FORMAT_SSIZE_T "d positional argument%.1s (%" CYTHON_FORMAT_SSIZE_T "d given)", func_name, more_or_less, num_expected, (num_expected == 1) ? "" : "s", num_found); } /* Profile */ #if CYTHON_PROFILE static int __Pyx_TraceSetupAndCall(PyCodeObject** code, PyFrameObject** frame, PyThreadState* tstate, const char *funcname, const char *srcfile, int firstlineno) { PyObject *type, *value, *traceback; int retval; if (*frame == NULL || !CYTHON_PROFILE_REUSE_FRAME) { if (*code == NULL) { *code = __Pyx_createFrameCodeObject(funcname, srcfile, firstlineno); if (*code == NULL) return 0; } *frame = PyFrame_New( tstate, /*PyThreadState *tstate*/ *code, /*PyCodeObject *code*/ __pyx_d, /*PyObject *globals*/ 0 /*PyObject *locals*/ ); if (*frame == NULL) return 0; if (CYTHON_TRACE && (*frame)->f_trace == NULL) { Py_INCREF(Py_None); (*frame)->f_trace = Py_None; } #if PY_VERSION_HEX < 0x030400B1 } else { (*frame)->f_tstate = tstate; #endif } __Pyx_PyFrame_SetLineNumber(*frame, firstlineno); retval = 1; __Pyx_EnterTracing(tstate); __Pyx_ErrFetchInState(tstate, &type, &value, &traceback); #if CYTHON_TRACE if (tstate->c_tracefunc) retval = tstate->c_tracefunc(tstate->c_traceobj, *frame, PyTrace_CALL, NULL) == 0; if (retval && tstate->c_profilefunc) #endif retval = tstate->c_profilefunc(tstate->c_profileobj, *frame, PyTrace_CALL, NULL) == 0; __Pyx_LeaveTracing(tstate); if (retval) { __Pyx_ErrRestoreInState(tstate, type, value, traceback); return __Pyx_IsTracing(tstate, 0, 0) && retval; } else { Py_XDECREF(type); Py_XDECREF(value); Py_XDECREF(traceback); return -1; } } static PyCodeObject *__Pyx_createFrameCodeObject(const char *funcname, const char *srcfile, int firstlineno) { PyCodeObject *py_code = 0; #if PY_MAJOR_VERSION >= 3 py_code = PyCode_NewEmpty(srcfile, funcname, firstlineno); if (likely(py_code)) { py_code->co_flags |= CO_OPTIMIZED | CO_NEWLOCALS; } #else PyObject *py_srcfile = 0; PyObject *py_funcname = 0; py_funcname = PyString_FromString(funcname); if (unlikely(!py_funcname)) goto bad; py_srcfile = PyString_FromString(srcfile); if (unlikely(!py_srcfile)) goto bad; py_code = PyCode_New( 0, 0, 0, CO_OPTIMIZED | CO_NEWLOCALS, __pyx_empty_bytes, /*PyObject *code,*/ __pyx_empty_tuple, /*PyObject *consts,*/ __pyx_empty_tuple, /*PyObject *names,*/ __pyx_empty_tuple, /*PyObject *varnames,*/ __pyx_empty_tuple, /*PyObject *freevars,*/ __pyx_empty_tuple, /*PyObject *cellvars,*/ py_srcfile, /*PyObject *filename,*/ py_funcname, /*PyObject *name,*/ firstlineno, __pyx_empty_bytes /*PyObject *lnotab*/ ); bad: Py_XDECREF(py_srcfile); Py_XDECREF(py_funcname); #endif return py_code; } #endif /* KeywordStringCheck */ static int __Pyx_CheckKeywordStrings( PyObject *kw, const char* function_name, int kw_allowed) { PyObject* key = 0; Py_ssize_t pos = 0; #if CYTHON_COMPILING_IN_PYPY if (!kw_allowed && PyDict_Next(kw, &pos, &key, 0)) goto invalid_keyword; return 1; #else if (CYTHON_METH_FASTCALL && likely(PyTuple_Check(kw))) { Py_ssize_t kwsize; #if CYTHON_ASSUME_SAFE_MACROS kwsize = PyTuple_GET_SIZE(kw); #else kwsize = PyTuple_Size(kw); if (kwsize < 0) return 0; #endif if (unlikely(kwsize == 0)) return 1; if (!kw_allowed) { #if CYTHON_ASSUME_SAFE_MACROS key = PyTuple_GET_ITEM(kw, 0); #else key = PyTuple_GetItem(kw, pos); if (!key) return 0; #endif goto invalid_keyword; } #if PY_VERSION_HEX < 0x03090000 for (pos = 0; pos < kwsize; pos++) { #if CYTHON_ASSUME_SAFE_MACROS key = PyTuple_GET_ITEM(kw, pos); #else key = PyTuple_GetItem(kw, pos); if (!key) return 0; #endif if (unlikely(!PyUnicode_Check(key))) goto invalid_keyword_type; } #endif return 1; } while (PyDict_Next(kw, &pos, &key, 0)) { #if PY_MAJOR_VERSION < 3 if (unlikely(!PyString_Check(key))) #endif if (unlikely(!PyUnicode_Check(key))) goto invalid_keyword_type; } if (!kw_allowed && unlikely(key)) goto invalid_keyword; return 1; invalid_keyword_type: PyErr_Format(PyExc_TypeError, "%.200s() keywords must be strings", function_name); return 0; #endif invalid_keyword: #if PY_MAJOR_VERSION < 3 PyErr_Format(PyExc_TypeError, "%.200s() got an unexpected keyword argument '%.200s'", function_name, PyString_AsString(key)); #else PyErr_Format(PyExc_TypeError, "%s() got an unexpected keyword argument '%U'", function_name, key); #endif return 0; } /* PyFunctionFastCall */ #if CYTHON_FAST_PYCALL && !CYTHON_VECTORCALL static PyObject* __Pyx_PyFunction_FastCallNoKw(PyCodeObject *co, PyObject **args, Py_ssize_t na, PyObject *globals) { PyFrameObject *f; PyThreadState *tstate = __Pyx_PyThreadState_Current; PyObject **fastlocals; Py_ssize_t i; PyObject *result; assert(globals != NULL); /* XXX Perhaps we should create a specialized PyFrame_New() that doesn't take locals, but does take builtins without sanity checking them. */ assert(tstate != NULL); f = PyFrame_New(tstate, co, globals, NULL); if (f == NULL) { return NULL; } fastlocals = __Pyx_PyFrame_GetLocalsplus(f); for (i = 0; i < na; i++) { Py_INCREF(*args); fastlocals[i] = *args++; } result = PyEval_EvalFrameEx(f,0); ++tstate->recursion_depth; Py_DECREF(f); --tstate->recursion_depth; return result; } static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, Py_ssize_t nargs, PyObject *kwargs) { PyCodeObject *co = (PyCodeObject *)PyFunction_GET_CODE(func); PyObject *globals = PyFunction_GET_GLOBALS(func); PyObject *argdefs = PyFunction_GET_DEFAULTS(func); PyObject *closure; #if PY_MAJOR_VERSION >= 3 PyObject *kwdefs; #endif PyObject *kwtuple, **k; PyObject **d; Py_ssize_t nd; Py_ssize_t nk; PyObject *result; assert(kwargs == NULL || PyDict_Check(kwargs)); nk = kwargs ? PyDict_Size(kwargs) : 0; #if PY_MAJOR_VERSION < 3 if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object"))) { return NULL; } #else if (unlikely(Py_EnterRecursiveCall(" while calling a Python object"))) { return NULL; } #endif if ( #if PY_MAJOR_VERSION >= 3 co->co_kwonlyargcount == 0 && #endif likely(kwargs == NULL || nk == 0) && co->co_flags == (CO_OPTIMIZED | CO_NEWLOCALS | CO_NOFREE)) { if (argdefs == NULL && co->co_argcount == nargs) { result = __Pyx_PyFunction_FastCallNoKw(co, args, nargs, globals); goto done; } else if (nargs == 0 && argdefs != NULL && co->co_argcount == Py_SIZE(argdefs)) { /* function called with no arguments, but all parameters have a default value: use default values as arguments .*/ args = &PyTuple_GET_ITEM(argdefs, 0); result =__Pyx_PyFunction_FastCallNoKw(co, args, Py_SIZE(argdefs), globals); goto done; } } if (kwargs != NULL) { Py_ssize_t pos, i; kwtuple = PyTuple_New(2 * nk); if (kwtuple == NULL) { result = NULL; goto done; } k = &PyTuple_GET_ITEM(kwtuple, 0); pos = i = 0; while (PyDict_Next(kwargs, &pos, &k[i], &k[i+1])) { Py_INCREF(k[i]); Py_INCREF(k[i+1]); i += 2; } nk = i / 2; } else { kwtuple = NULL; k = NULL; } closure = PyFunction_GET_CLOSURE(func); #if PY_MAJOR_VERSION >= 3 kwdefs = PyFunction_GET_KW_DEFAULTS(func); #endif if (argdefs != NULL) { d = &PyTuple_GET_ITEM(argdefs, 0); nd = Py_SIZE(argdefs); } else { d = NULL; nd = 0; } #if PY_MAJOR_VERSION >= 3 result = PyEval_EvalCodeEx((PyObject*)co, globals, (PyObject *)NULL, args, (int)nargs, k, (int)nk, d, (int)nd, kwdefs, closure); #else result = PyEval_EvalCodeEx(co, globals, (PyObject *)NULL, args, (int)nargs, k, (int)nk, d, (int)nd, closure); #endif Py_XDECREF(kwtuple); done: Py_LeaveRecursiveCall(); return result; } #endif /* PyObjectCall */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) { PyObject *result; ternaryfunc call = Py_TYPE(func)->tp_call; if (unlikely(!call)) return PyObject_Call(func, arg, kw); #if PY_MAJOR_VERSION < 3 if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object"))) return NULL; #else if (unlikely(Py_EnterRecursiveCall(" while calling a Python object"))) return NULL; #endif result = (*call)(func, arg, kw); Py_LeaveRecursiveCall(); if (unlikely(!result) && unlikely(!PyErr_Occurred())) { PyErr_SetString( PyExc_SystemError, "NULL result without error in PyObject_Call"); } return result; } #endif /* PyObjectCallMethO */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) { PyObject *self, *result; PyCFunction cfunc; cfunc = __Pyx_CyOrPyCFunction_GET_FUNCTION(func); self = __Pyx_CyOrPyCFunction_GET_SELF(func); #if PY_MAJOR_VERSION < 3 if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object"))) return NULL; #else if (unlikely(Py_EnterRecursiveCall(" while calling a Python object"))) return NULL; #endif result = cfunc(self, arg); Py_LeaveRecursiveCall(); if (unlikely(!result) && unlikely(!PyErr_Occurred())) { PyErr_SetString( PyExc_SystemError, "NULL result without error in PyObject_Call"); } return result; } #endif /* PyObjectFastCall */ #if PY_VERSION_HEX < 0x03090000 || CYTHON_COMPILING_IN_LIMITED_API static PyObject* __Pyx_PyObject_FastCall_fallback(PyObject *func, PyObject **args, size_t nargs, PyObject *kwargs) { PyObject *argstuple; PyObject *result = 0; size_t i; argstuple = PyTuple_New((Py_ssize_t)nargs); if (unlikely(!argstuple)) return NULL; for (i = 0; i < nargs; i++) { Py_INCREF(args[i]); if (__Pyx_PyTuple_SET_ITEM(argstuple, (Py_ssize_t)i, args[i]) < 0) goto bad; } result = __Pyx_PyObject_Call(func, argstuple, kwargs); bad: Py_DECREF(argstuple); return result; } #endif static CYTHON_INLINE PyObject* __Pyx_PyObject_FastCallDict(PyObject *func, PyObject **args, size_t _nargs, PyObject *kwargs) { Py_ssize_t nargs = __Pyx_PyVectorcall_NARGS(_nargs); #if CYTHON_COMPILING_IN_CPYTHON if (nargs == 0 && kwargs == NULL) { if (__Pyx_CyOrPyCFunction_Check(func) && likely( __Pyx_CyOrPyCFunction_GET_FLAGS(func) & METH_NOARGS)) return __Pyx_PyObject_CallMethO(func, NULL); } else if (nargs == 1 && kwargs == NULL) { if (__Pyx_CyOrPyCFunction_Check(func) && likely( __Pyx_CyOrPyCFunction_GET_FLAGS(func) & METH_O)) return __Pyx_PyObject_CallMethO(func, args[0]); } #endif #if PY_VERSION_HEX < 0x030800B1 #if CYTHON_FAST_PYCCALL if (PyCFunction_Check(func)) { if (kwargs) { return _PyCFunction_FastCallDict(func, args, nargs, kwargs); } else { return _PyCFunction_FastCallKeywords(func, args, nargs, NULL); } } #if PY_VERSION_HEX >= 0x030700A1 if (!kwargs && __Pyx_IS_TYPE(func, &PyMethodDescr_Type)) { return _PyMethodDescr_FastCallKeywords(func, args, nargs, NULL); } #endif #endif #if CYTHON_FAST_PYCALL if (PyFunction_Check(func)) { return __Pyx_PyFunction_FastCallDict(func, args, nargs, kwargs); } #endif #endif if (kwargs == NULL) { #if CYTHON_VECTORCALL #if PY_VERSION_HEX < 0x03090000 vectorcallfunc f = _PyVectorcall_Function(func); #else vectorcallfunc f = PyVectorcall_Function(func); #endif if (f) { return f(func, args, (size_t)nargs, NULL); } #elif defined(__Pyx_CyFunction_USED) && CYTHON_BACKPORT_VECTORCALL if (__Pyx_CyFunction_CheckExact(func)) { __pyx_vectorcallfunc f = __Pyx_CyFunction_func_vectorcall(func); if (f) return f(func, args, (size_t)nargs, NULL); } #endif } if (nargs == 0) { return __Pyx_PyObject_Call(func, __pyx_empty_tuple, kwargs); } #if PY_VERSION_HEX >= 0x03090000 && !CYTHON_COMPILING_IN_LIMITED_API return PyObject_VectorcallDict(func, args, (size_t)nargs, kwargs); #else return __Pyx_PyObject_FastCall_fallback(func, args, (size_t)nargs, kwargs); #endif } /* PyObjectCallOneArg */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { PyObject *args[2] = {NULL, arg}; return __Pyx_PyObject_FastCall(func, args+1, 1 | __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET); } /* RaiseException */ #if PY_MAJOR_VERSION < 3 static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) { __Pyx_PyThreadState_declare CYTHON_UNUSED_VAR(cause); Py_XINCREF(type); if (!value || value == Py_None) value = NULL; else Py_INCREF(value); if (!tb || tb == Py_None) tb = NULL; else { Py_INCREF(tb); if (!PyTraceBack_Check(tb)) { PyErr_SetString(PyExc_TypeError, "raise: arg 3 must be a traceback or None"); goto raise_error; } } if (PyType_Check(type)) { #if CYTHON_COMPILING_IN_PYPY if (!value) { Py_INCREF(Py_None); value = Py_None; } #endif PyErr_NormalizeException(&type, &value, &tb); } else { if (value) { PyErr_SetString(PyExc_TypeError, "instance exception may not have a separate value"); goto raise_error; } value = type; type = (PyObject*) Py_TYPE(type); Py_INCREF(type); if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) { PyErr_SetString(PyExc_TypeError, "raise: exception class must be a subclass of BaseException"); goto raise_error; } } __Pyx_PyThreadState_assign __Pyx_ErrRestore(type, value, tb); return; raise_error: Py_XDECREF(value); Py_XDECREF(type); Py_XDECREF(tb); return; } #else static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) { PyObject* owned_instance = NULL; if (tb == Py_None) { tb = 0; } else if (tb && !PyTraceBack_Check(tb)) { PyErr_SetString(PyExc_TypeError, "raise: arg 3 must be a traceback or None"); goto bad; } if (value == Py_None) value = 0; if (PyExceptionInstance_Check(type)) { if (value) { PyErr_SetString(PyExc_TypeError, "instance exception may not have a separate value"); goto bad; } value = type; type = (PyObject*) Py_TYPE(value); } else if (PyExceptionClass_Check(type)) { PyObject *instance_class = NULL; if (value && PyExceptionInstance_Check(value)) { instance_class = (PyObject*) Py_TYPE(value); if (instance_class != type) { int is_subclass = PyObject_IsSubclass(instance_class, type); if (!is_subclass) { instance_class = NULL; } else if (unlikely(is_subclass == -1)) { goto bad; } else { type = instance_class; } } } if (!instance_class) { PyObject *args; if (!value) args = PyTuple_New(0); else if (PyTuple_Check(value)) { Py_INCREF(value); args = value; } else args = PyTuple_Pack(1, value); if (!args) goto bad; owned_instance = PyObject_Call(type, args, NULL); Py_DECREF(args); if (!owned_instance) goto bad; value = owned_instance; if (!PyExceptionInstance_Check(value)) { PyErr_Format(PyExc_TypeError, "calling %R should have returned an instance of " "BaseException, not %R", type, Py_TYPE(value)); goto bad; } } } else { PyErr_SetString(PyExc_TypeError, "raise: exception class must be a subclass of BaseException"); goto bad; } if (cause) { PyObject *fixed_cause; if (cause == Py_None) { fixed_cause = NULL; } else if (PyExceptionClass_Check(cause)) { fixed_cause = PyObject_CallObject(cause, NULL); if (fixed_cause == NULL) goto bad; } else if (PyExceptionInstance_Check(cause)) { fixed_cause = cause; Py_INCREF(fixed_cause); } else { PyErr_SetString(PyExc_TypeError, "exception causes must derive from " "BaseException"); goto bad; } PyException_SetCause(value, fixed_cause); } PyErr_SetObject(type, value); if (tb) { #if PY_VERSION_HEX >= 0x030C00A6 PyException_SetTraceback(value, tb); #elif CYTHON_FAST_THREAD_STATE PyThreadState *tstate = __Pyx_PyThreadState_Current; PyObject* tmp_tb = tstate->curexc_traceback; if (tb != tmp_tb) { Py_INCREF(tb); tstate->curexc_traceback = tb; Py_XDECREF(tmp_tb); } #else PyObject *tmp_type, *tmp_value, *tmp_tb; PyErr_Fetch(&tmp_type, &tmp_value, &tmp_tb); Py_INCREF(tb); PyErr_Restore(tmp_type, tmp_value, tb); Py_XDECREF(tmp_tb); #endif } bad: Py_XDECREF(owned_instance); return; } #endif /* GetAttr3 */ #if __PYX_LIMITED_VERSION_HEX < 0x030d00A1 static PyObject *__Pyx_GetAttr3Default(PyObject *d) { __Pyx_PyThreadState_declare __Pyx_PyThreadState_assign if (unlikely(!__Pyx_PyErr_ExceptionMatches(PyExc_AttributeError))) return NULL; __Pyx_PyErr_Clear(); Py_INCREF(d); return d; } #endif static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *o, PyObject *n, PyObject *d) { PyObject *r; #if __PYX_LIMITED_VERSION_HEX >= 0x030d00A1 int res = PyObject_GetOptionalAttr(o, n, &r); return (res != 0) ? r : __Pyx_NewRef(d); #else #if CYTHON_USE_TYPE_SLOTS if (likely(PyString_Check(n))) { r = __Pyx_PyObject_GetAttrStrNoError(o, n); if (unlikely(!r) && likely(!PyErr_Occurred())) { r = __Pyx_NewRef(d); } return r; } #endif r = PyObject_GetAttr(o, n); return (likely(r)) ? r : __Pyx_GetAttr3Default(d); #endif } /* PyDictVersioning */ #if CYTHON_USE_DICT_VERSIONS && CYTHON_USE_TYPE_SLOTS static CYTHON_INLINE PY_UINT64_T __Pyx_get_tp_dict_version(PyObject *obj) { PyObject *dict = Py_TYPE(obj)->tp_dict; return likely(dict) ? __PYX_GET_DICT_VERSION(dict) : 0; } static CYTHON_INLINE PY_UINT64_T __Pyx_get_object_dict_version(PyObject *obj) { PyObject **dictptr = NULL; Py_ssize_t offset = Py_TYPE(obj)->tp_dictoffset; if (offset) { #if CYTHON_COMPILING_IN_CPYTHON dictptr = (likely(offset > 0)) ? (PyObject **) ((char *)obj + offset) : _PyObject_GetDictPtr(obj); #else dictptr = _PyObject_GetDictPtr(obj); #endif } return (dictptr && *dictptr) ? __PYX_GET_DICT_VERSION(*dictptr) : 0; } static CYTHON_INLINE int __Pyx_object_dict_version_matches(PyObject* obj, PY_UINT64_T tp_dict_version, PY_UINT64_T obj_dict_version) { PyObject *dict = Py_TYPE(obj)->tp_dict; if (unlikely(!dict) || unlikely(tp_dict_version != __PYX_GET_DICT_VERSION(dict))) return 0; return obj_dict_version == __Pyx_get_object_dict_version(obj); } #endif /* GetModuleGlobalName */ #if CYTHON_USE_DICT_VERSIONS static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value) #else static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name) #endif { PyObject *result; #if !CYTHON_AVOID_BORROWED_REFS #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 && PY_VERSION_HEX < 0x030d0000 result = _PyDict_GetItem_KnownHash(__pyx_d, name, ((PyASCIIObject *) name)->hash); __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) if (likely(result)) { return __Pyx_NewRef(result); } else if (unlikely(PyErr_Occurred())) { return NULL; } #elif CYTHON_COMPILING_IN_LIMITED_API if (unlikely(!__pyx_m)) { return NULL; } result = PyObject_GetAttr(__pyx_m, name); if (likely(result)) { return result; } #else result = PyDict_GetItem(__pyx_d, name); __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) if (likely(result)) { return __Pyx_NewRef(result); } #endif #else result = PyObject_GetItem(__pyx_d, name); __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) if (likely(result)) { return __Pyx_NewRef(result); } PyErr_Clear(); #endif return __Pyx_GetBuiltinName(name); } /* RaiseUnexpectedTypeError */ static int __Pyx_RaiseUnexpectedTypeError(const char *expected, PyObject *obj) { __Pyx_TypeName obj_type_name = __Pyx_PyType_GetName(Py_TYPE(obj)); PyErr_Format(PyExc_TypeError, "Expected %s, got " __Pyx_FMT_TYPENAME, expected, obj_type_name); __Pyx_DECREF_TypeName(obj_type_name); return 0; } /* ExtTypeTest */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { __Pyx_TypeName obj_type_name; __Pyx_TypeName type_name; if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } if (likely(__Pyx_TypeCheck(obj, type))) return 1; obj_type_name = __Pyx_PyType_GetName(Py_TYPE(obj)); type_name = __Pyx_PyType_GetName(type); PyErr_Format(PyExc_TypeError, "Cannot convert " __Pyx_FMT_TYPENAME " to " __Pyx_FMT_TYPENAME, obj_type_name, type_name); __Pyx_DECREF_TypeName(obj_type_name); __Pyx_DECREF_TypeName(type_name); return 0; } /* PyIntBinop */ #if !CYTHON_COMPILING_IN_PYPY static PyObject* __Pyx_PyInt_AddObjC(PyObject *op1, PyObject *op2, long intval, int inplace, int zerodivision_check) { CYTHON_MAYBE_UNUSED_VAR(intval); CYTHON_MAYBE_UNUSED_VAR(inplace); CYTHON_UNUSED_VAR(zerodivision_check); #if PY_MAJOR_VERSION < 3 if (likely(PyInt_CheckExact(op1))) { const long b = intval; long x; long a = PyInt_AS_LONG(op1); x = (long)((unsigned long)a + (unsigned long)b); if (likely((x^a) >= 0 || (x^b) >= 0)) return PyInt_FromLong(x); return PyLong_Type.tp_as_number->nb_add(op1, op2); } #endif #if CYTHON_USE_PYLONG_INTERNALS if (likely(PyLong_CheckExact(op1))) { const long b = intval; long a, x; #ifdef HAVE_LONG_LONG const PY_LONG_LONG llb = intval; PY_LONG_LONG lla, llx; #endif if (unlikely(__Pyx_PyLong_IsZero(op1))) { return __Pyx_NewRef(op2); } if (likely(__Pyx_PyLong_IsCompact(op1))) { a = __Pyx_PyLong_CompactValue(op1); } else { const digit* digits = __Pyx_PyLong_Digits(op1); const Py_ssize_t size = __Pyx_PyLong_SignedDigitCount(op1); switch (size) { case -2: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { a = -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; #ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { lla = -(PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; #endif } CYTHON_FALLTHROUGH; case 2: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { a = (long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; #ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { lla = (PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; #endif } CYTHON_FALLTHROUGH; case -3: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { a = -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; #ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { lla = -(PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; #endif } CYTHON_FALLTHROUGH; case 3: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { a = (long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; #ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { lla = (PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; #endif } CYTHON_FALLTHROUGH; case -4: if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { a = -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; #ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { lla = -(PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; #endif } CYTHON_FALLTHROUGH; case 4: if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { a = (long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; #ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { lla = (PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; #endif } CYTHON_FALLTHROUGH; default: return PyLong_Type.tp_as_number->nb_add(op1, op2); } } x = a + b; return PyLong_FromLong(x); #ifdef HAVE_LONG_LONG long_long: llx = lla + llb; return PyLong_FromLongLong(llx); #endif } #endif if (PyFloat_CheckExact(op1)) { const long b = intval; #if CYTHON_COMPILING_IN_LIMITED_API double a = __pyx_PyFloat_AsDouble(op1); #else double a = PyFloat_AS_DOUBLE(op1); #endif double result; PyFPE_START_PROTECT("add", return NULL) result = ((double)a) + (double)b; PyFPE_END_PROTECT(result) return PyFloat_FromDouble(result); } return (inplace ? PyNumber_InPlaceAdd : PyNumber_Add)(op1, op2); } #endif /* WriteUnraisableException */ static void __Pyx_WriteUnraisable(const char *name, int clineno, int lineno, const char *filename, int full_traceback, int nogil) { PyObject *old_exc, *old_val, *old_tb; PyObject *ctx; __Pyx_PyThreadState_declare #ifdef WITH_THREAD PyGILState_STATE state; if (nogil) state = PyGILState_Ensure(); else state = (PyGILState_STATE)0; #endif CYTHON_UNUSED_VAR(clineno); CYTHON_UNUSED_VAR(lineno); CYTHON_UNUSED_VAR(filename); CYTHON_MAYBE_UNUSED_VAR(nogil); __Pyx_PyThreadState_assign __Pyx_ErrFetch(&old_exc, &old_val, &old_tb); if (full_traceback) { Py_XINCREF(old_exc); Py_XINCREF(old_val); Py_XINCREF(old_tb); __Pyx_ErrRestore(old_exc, old_val, old_tb); PyErr_PrintEx(0); } #if PY_MAJOR_VERSION < 3 ctx = PyString_FromString(name); #else ctx = PyUnicode_FromString(name); #endif __Pyx_ErrRestore(old_exc, old_val, old_tb); if (!ctx) { PyErr_WriteUnraisable(Py_None); } else { PyErr_WriteUnraisable(ctx); Py_DECREF(ctx); } #ifdef WITH_THREAD if (nogil) PyGILState_Release(state); #endif } /* PyObjectCallNoArg */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallNoArg(PyObject *func) { PyObject *arg[2] = {NULL, NULL}; return __Pyx_PyObject_FastCall(func, arg + 1, 0 | __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET); } /* ArgTypeTest */ static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact) { __Pyx_TypeName type_name; __Pyx_TypeName obj_type_name; if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } else if (exact) { #if PY_MAJOR_VERSION == 2 if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; #endif } else { if (likely(__Pyx_TypeCheck(obj, type))) return 1; } type_name = __Pyx_PyType_GetName(type); obj_type_name = __Pyx_PyType_GetName(Py_TYPE(obj)); PyErr_Format(PyExc_TypeError, "Argument '%.200s' has incorrect type (expected " __Pyx_FMT_TYPENAME ", got " __Pyx_FMT_TYPENAME ")", name, type_name, obj_type_name); __Pyx_DECREF_TypeName(type_name); __Pyx_DECREF_TypeName(obj_type_name); return 0; } /* PyObjectFormatAndDecref */ static CYTHON_INLINE PyObject* __Pyx_PyObject_FormatSimpleAndDecref(PyObject* s, PyObject* f) { if (unlikely(!s)) return NULL; if (likely(PyUnicode_CheckExact(s))) return s; #if PY_MAJOR_VERSION < 3 if (likely(PyString_CheckExact(s))) { PyObject *result = PyUnicode_FromEncodedObject(s, NULL, "strict"); Py_DECREF(s); return result; } #endif return __Pyx_PyObject_FormatAndDecref(s, f); } static CYTHON_INLINE PyObject* __Pyx_PyObject_FormatAndDecref(PyObject* s, PyObject* f) { PyObject *result; if (unlikely(!s)) return NULL; result = PyObject_Format(s, f); Py_DECREF(s); return result; } /* JoinPyUnicode */ static PyObject* __Pyx_PyUnicode_Join(PyObject* value_tuple, Py_ssize_t value_count, Py_ssize_t result_ulength, Py_UCS4 max_char) { #if CYTHON_USE_UNICODE_INTERNALS && CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS PyObject *result_uval; int result_ukind, kind_shift; Py_ssize_t i, char_pos; void *result_udata; CYTHON_MAYBE_UNUSED_VAR(max_char); #if CYTHON_PEP393_ENABLED result_uval = PyUnicode_New(result_ulength, max_char); if (unlikely(!result_uval)) return NULL; result_ukind = (max_char <= 255) ? PyUnicode_1BYTE_KIND : (max_char <= 65535) ? PyUnicode_2BYTE_KIND : PyUnicode_4BYTE_KIND; kind_shift = (result_ukind == PyUnicode_4BYTE_KIND) ? 2 : result_ukind - 1; result_udata = PyUnicode_DATA(result_uval); #else result_uval = PyUnicode_FromUnicode(NULL, result_ulength); if (unlikely(!result_uval)) return NULL; result_ukind = sizeof(Py_UNICODE); kind_shift = (result_ukind == 4) ? 2 : result_ukind - 1; result_udata = PyUnicode_AS_UNICODE(result_uval); #endif assert(kind_shift == 2 || kind_shift == 1 || kind_shift == 0); char_pos = 0; for (i=0; i < value_count; i++) { int ukind; Py_ssize_t ulength; void *udata; PyObject *uval = PyTuple_GET_ITEM(value_tuple, i); if (unlikely(__Pyx_PyUnicode_READY(uval))) goto bad; ulength = __Pyx_PyUnicode_GET_LENGTH(uval); if (unlikely(!ulength)) continue; if (unlikely((PY_SSIZE_T_MAX >> kind_shift) - ulength < char_pos)) goto overflow; ukind = __Pyx_PyUnicode_KIND(uval); udata = __Pyx_PyUnicode_DATA(uval); if (!CYTHON_PEP393_ENABLED || ukind == result_ukind) { memcpy((char *)result_udata + (char_pos << kind_shift), udata, (size_t) (ulength << kind_shift)); } else { #if PY_VERSION_HEX >= 0x030d0000 if (unlikely(PyUnicode_CopyCharacters(result_uval, char_pos, uval, 0, ulength) < 0)) goto bad; #elif CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030300F0 || defined(_PyUnicode_FastCopyCharacters) _PyUnicode_FastCopyCharacters(result_uval, char_pos, uval, 0, ulength); #else Py_ssize_t j; for (j=0; j < ulength; j++) { Py_UCS4 uchar = __Pyx_PyUnicode_READ(ukind, udata, j); __Pyx_PyUnicode_WRITE(result_ukind, result_udata, char_pos+j, uchar); } #endif } char_pos += ulength; } return result_uval; overflow: PyErr_SetString(PyExc_OverflowError, "join() result is too long for a Python string"); bad: Py_DECREF(result_uval); return NULL; #else CYTHON_UNUSED_VAR(max_char); CYTHON_UNUSED_VAR(result_ulength); CYTHON_UNUSED_VAR(value_count); return PyUnicode_Join(__pyx_empty_unicode, value_tuple); #endif } /* DictGetItem */ #if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { PyObject *value; value = PyDict_GetItemWithError(d, key); if (unlikely(!value)) { if (!PyErr_Occurred()) { if (unlikely(PyTuple_Check(key))) { PyObject* args = PyTuple_Pack(1, key); if (likely(args)) { PyErr_SetObject(PyExc_KeyError, args); Py_DECREF(args); } } else { PyErr_SetObject(PyExc_KeyError, key); } } return NULL; } Py_INCREF(value); return value; } #endif /* GetTopmostException */ #if CYTHON_USE_EXC_INFO_STACK && CYTHON_FAST_THREAD_STATE static _PyErr_StackItem * __Pyx_PyErr_GetTopmostException(PyThreadState *tstate) { _PyErr_StackItem *exc_info = tstate->exc_info; while ((exc_info->exc_value == NULL || exc_info->exc_value == Py_None) && exc_info->previous_item != NULL) { exc_info = exc_info->previous_item; } return exc_info; } #endif /* SaveResetException */ #if CYTHON_FAST_THREAD_STATE static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { #if CYTHON_USE_EXC_INFO_STACK && PY_VERSION_HEX >= 0x030B00a4 _PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate); PyObject *exc_value = exc_info->exc_value; if (exc_value == NULL || exc_value == Py_None) { *value = NULL; *type = NULL; *tb = NULL; } else { *value = exc_value; Py_INCREF(*value); *type = (PyObject*) Py_TYPE(exc_value); Py_INCREF(*type); *tb = PyException_GetTraceback(exc_value); } #elif CYTHON_USE_EXC_INFO_STACK _PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate); *type = exc_info->exc_type; *value = exc_info->exc_value; *tb = exc_info->exc_traceback; Py_XINCREF(*type); Py_XINCREF(*value); Py_XINCREF(*tb); #else *type = tstate->exc_type; *value = tstate->exc_value; *tb = tstate->exc_traceback; Py_XINCREF(*type); Py_XINCREF(*value); Py_XINCREF(*tb); #endif } static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { #if CYTHON_USE_EXC_INFO_STACK && PY_VERSION_HEX >= 0x030B00a4 _PyErr_StackItem *exc_info = tstate->exc_info; PyObject *tmp_value = exc_info->exc_value; exc_info->exc_value = value; Py_XDECREF(tmp_value); Py_XDECREF(type); Py_XDECREF(tb); #else PyObject *tmp_type, *tmp_value, *tmp_tb; #if CYTHON_USE_EXC_INFO_STACK _PyErr_StackItem *exc_info = tstate->exc_info; tmp_type = exc_info->exc_type; tmp_value = exc_info->exc_value; tmp_tb = exc_info->exc_traceback; exc_info->exc_type = type; exc_info->exc_value = value; exc_info->exc_traceback = tb; #else tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; tstate->exc_type = type; tstate->exc_value = value; tstate->exc_traceback = tb; #endif Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); #endif } #endif /* GetException */ #if CYTHON_FAST_THREAD_STATE static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) #else static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) #endif { PyObject *local_type = NULL, *local_value, *local_tb = NULL; #if CYTHON_FAST_THREAD_STATE PyObject *tmp_type, *tmp_value, *tmp_tb; #if PY_VERSION_HEX >= 0x030C00A6 local_value = tstate->current_exception; tstate->current_exception = 0; if (likely(local_value)) { local_type = (PyObject*) Py_TYPE(local_value); Py_INCREF(local_type); local_tb = PyException_GetTraceback(local_value); } #else local_type = tstate->curexc_type; local_value = tstate->curexc_value; local_tb = tstate->curexc_traceback; tstate->curexc_type = 0; tstate->curexc_value = 0; tstate->curexc_traceback = 0; #endif #else PyErr_Fetch(&local_type, &local_value, &local_tb); #endif PyErr_NormalizeException(&local_type, &local_value, &local_tb); #if CYTHON_FAST_THREAD_STATE && PY_VERSION_HEX >= 0x030C00A6 if (unlikely(tstate->current_exception)) #elif CYTHON_FAST_THREAD_STATE if (unlikely(tstate->curexc_type)) #else if (unlikely(PyErr_Occurred())) #endif goto bad; #if PY_MAJOR_VERSION >= 3 if (local_tb) { if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) goto bad; } #endif Py_XINCREF(local_tb); Py_XINCREF(local_type); Py_XINCREF(local_value); *type = local_type; *value = local_value; *tb = local_tb; #if CYTHON_FAST_THREAD_STATE #if CYTHON_USE_EXC_INFO_STACK { _PyErr_StackItem *exc_info = tstate->exc_info; #if PY_VERSION_HEX >= 0x030B00a4 tmp_value = exc_info->exc_value; exc_info->exc_value = local_value; tmp_type = NULL; tmp_tb = NULL; Py_XDECREF(local_type); Py_XDECREF(local_tb); #else tmp_type = exc_info->exc_type; tmp_value = exc_info->exc_value; tmp_tb = exc_info->exc_traceback; exc_info->exc_type = local_type; exc_info->exc_value = local_value; exc_info->exc_traceback = local_tb; #endif } #else tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; tstate->exc_type = local_type; tstate->exc_value = local_value; tstate->exc_traceback = local_tb; #endif Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); #else PyErr_SetExcInfo(local_type, local_value, local_tb); #endif return 0; bad: *type = 0; *value = 0; *tb = 0; Py_XDECREF(local_type); Py_XDECREF(local_value); Py_XDECREF(local_tb); return -1; } /* UnpackUnboundCMethod */ static PyObject *__Pyx_SelflessCall(PyObject *method, PyObject *args, PyObject *kwargs) { PyObject *result; PyObject *selfless_args = PyTuple_GetSlice(args, 1, PyTuple_Size(args)); if (unlikely(!selfless_args)) return NULL; result = PyObject_Call(method, selfless_args, kwargs); Py_DECREF(selfless_args); return result; } static PyMethodDef __Pyx_UnboundCMethod_Def = { "CythonUnboundCMethod", __PYX_REINTERPRET_FUNCION(PyCFunction, __Pyx_SelflessCall), METH_VARARGS | METH_KEYWORDS, NULL }; static int __Pyx_TryUnpackUnboundCMethod(__Pyx_CachedCFunction* target) { PyObject *method; method = __Pyx_PyObject_GetAttrStr(target->type, *target->method_name); if (unlikely(!method)) return -1; target->method = method; #if CYTHON_COMPILING_IN_CPYTHON #if PY_MAJOR_VERSION >= 3 if (likely(__Pyx_TypeCheck(method, &PyMethodDescr_Type))) #else if (likely(!__Pyx_CyOrPyCFunction_Check(method))) #endif { PyMethodDescrObject *descr = (PyMethodDescrObject*) method; target->func = descr->d_method->ml_meth; target->flag = descr->d_method->ml_flags & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_STACKLESS); } else #endif #if CYTHON_COMPILING_IN_PYPY #else if (PyCFunction_Check(method)) #endif { PyObject *self; int self_found; #if CYTHON_COMPILING_IN_LIMITED_API || CYTHON_COMPILING_IN_PYPY self = PyObject_GetAttrString(method, "__self__"); if (!self) { PyErr_Clear(); } #else self = PyCFunction_GET_SELF(method); #endif self_found = (self && self != Py_None); #if CYTHON_COMPILING_IN_LIMITED_API || CYTHON_COMPILING_IN_PYPY Py_XDECREF(self); #endif if (self_found) { PyObject *unbound_method = PyCFunction_New(&__Pyx_UnboundCMethod_Def, method); if (unlikely(!unbound_method)) return -1; Py_DECREF(method); target->method = unbound_method; } } return 0; } /* CallUnboundCMethod0 */ static PyObject* __Pyx__CallUnboundCMethod0(__Pyx_CachedCFunction* cfunc, PyObject* self) { PyObject *args, *result = NULL; if (unlikely(!cfunc->method) && unlikely(__Pyx_TryUnpackUnboundCMethod(cfunc) < 0)) return NULL; #if CYTHON_ASSUME_SAFE_MACROS args = PyTuple_New(1); if (unlikely(!args)) goto bad; Py_INCREF(self); PyTuple_SET_ITEM(args, 0, self); #else args = PyTuple_Pack(1, self); if (unlikely(!args)) goto bad; #endif result = __Pyx_PyObject_Call(cfunc->method, args, NULL); Py_DECREF(args); bad: return result; } /* py_dict_keys */ static CYTHON_INLINE PyObject* __Pyx_PyDict_Keys(PyObject* d) { if (PY_MAJOR_VERSION >= 3) return __Pyx_CallUnboundCMethod0(&__pyx_umethod_PyDict_Type_keys, d); else return PyDict_Keys(d); } /* UnicodeAsUCS4 */ static CYTHON_INLINE Py_UCS4 __Pyx_PyUnicode_AsPy_UCS4(PyObject* x) { Py_ssize_t length; #if CYTHON_PEP393_ENABLED length = PyUnicode_GET_LENGTH(x); if (likely(length == 1)) { return PyUnicode_READ_CHAR(x, 0); } #else length = PyUnicode_GET_SIZE(x); if (likely(length == 1)) { return PyUnicode_AS_UNICODE(x)[0]; } #if Py_UNICODE_SIZE == 2 else if (PyUnicode_GET_SIZE(x) == 2) { Py_UCS4 high_val = PyUnicode_AS_UNICODE(x)[0]; if (high_val >= 0xD800 && high_val <= 0xDBFF) { Py_UCS4 low_val = PyUnicode_AS_UNICODE(x)[1]; if (low_val >= 0xDC00 && low_val <= 0xDFFF) { return 0x10000 + (((high_val & ((1<<10)-1)) << 10) | (low_val & ((1<<10)-1))); } } } #endif #endif PyErr_Format(PyExc_ValueError, "only single character unicode strings can be converted to Py_UCS4, " "got length %" CYTHON_FORMAT_SSIZE_T "d", length); return (Py_UCS4)-1; } /* object_ord */ static long __Pyx__PyObject_Ord(PyObject* c) { Py_ssize_t size; if (PyBytes_Check(c)) { size = PyBytes_GET_SIZE(c); if (likely(size == 1)) { return (unsigned char) PyBytes_AS_STRING(c)[0]; } #if PY_MAJOR_VERSION < 3 } else if (PyUnicode_Check(c)) { return (long)__Pyx_PyUnicode_AsPy_UCS4(c); #endif #if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) } else if (PyByteArray_Check(c)) { size = PyByteArray_GET_SIZE(c); if (likely(size == 1)) { return (unsigned char) PyByteArray_AS_STRING(c)[0]; } #endif } else { __Pyx_TypeName c_type_name = __Pyx_PyType_GetName(Py_TYPE(c)); PyErr_Format(PyExc_TypeError, "ord() expected string of length 1, but " __Pyx_FMT_TYPENAME " found", c_type_name); __Pyx_DECREF_TypeName(c_type_name); return (long)(Py_UCS4)-1; } PyErr_Format(PyExc_TypeError, "ord() expected a character, but string of length %zd found", size); return (long)(Py_UCS4)-1; } /* RaiseTooManyValuesToUnpack */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { PyErr_Format(PyExc_ValueError, "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected); } /* RaiseNeedMoreValuesToUnpack */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { PyErr_Format(PyExc_ValueError, "need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack", index, (index == 1) ? "" : "s"); } /* IterFinish */ static CYTHON_INLINE int __Pyx_IterFinish(void) { PyObject* exc_type; __Pyx_PyThreadState_declare __Pyx_PyThreadState_assign exc_type = __Pyx_PyErr_CurrentExceptionType(); if (unlikely(exc_type)) { if (unlikely(!__Pyx_PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration))) return -1; __Pyx_PyErr_Clear(); return 0; } return 0; } /* UnpackItemEndCheck */ static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected) { if (unlikely(retval)) { Py_DECREF(retval); __Pyx_RaiseTooManyValuesError(expected); return -1; } return __Pyx_IterFinish(); } /* PyObjectSetAttrStr */ #if CYTHON_USE_TYPE_SLOTS static CYTHON_INLINE int __Pyx_PyObject_SetAttrStr(PyObject* obj, PyObject* attr_name, PyObject* value) { PyTypeObject* tp = Py_TYPE(obj); if (likely(tp->tp_setattro)) return tp->tp_setattro(obj, attr_name, value); #if PY_MAJOR_VERSION < 3 if (likely(tp->tp_setattr)) return tp->tp_setattr(obj, PyString_AS_STRING(attr_name), value); #endif return PyObject_SetAttr(obj, attr_name, value); } #endif /* Import */ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { PyObject *module = 0; PyObject *empty_dict = 0; PyObject *empty_list = 0; #if PY_MAJOR_VERSION < 3 PyObject *py_import; py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); if (unlikely(!py_import)) goto bad; if (!from_list) { empty_list = PyList_New(0); if (unlikely(!empty_list)) goto bad; from_list = empty_list; } #endif empty_dict = PyDict_New(); if (unlikely(!empty_dict)) goto bad; { #if PY_MAJOR_VERSION >= 3 if (level == -1) { if (strchr(__Pyx_MODULE_NAME, '.') != NULL) { module = PyImport_ImportModuleLevelObject( name, __pyx_d, empty_dict, from_list, 1); if (unlikely(!module)) { if (unlikely(!PyErr_ExceptionMatches(PyExc_ImportError))) goto bad; PyErr_Clear(); } } level = 0; } #endif if (!module) { #if PY_MAJOR_VERSION < 3 PyObject *py_level = PyInt_FromLong(level); if (unlikely(!py_level)) goto bad; module = PyObject_CallFunctionObjArgs(py_import, name, __pyx_d, empty_dict, from_list, py_level, (PyObject *)NULL); Py_DECREF(py_level); #else module = PyImport_ImportModuleLevelObject( name, __pyx_d, empty_dict, from_list, level); #endif } } bad: Py_XDECREF(empty_dict); Py_XDECREF(empty_list); #if PY_MAJOR_VERSION < 3 Py_XDECREF(py_import); #endif return module; } /* ImportFrom */ static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name) { PyObject* value = __Pyx_PyObject_GetAttrStr(module, name); if (unlikely(!value) && PyErr_ExceptionMatches(PyExc_AttributeError)) { const char* module_name_str = 0; PyObject* module_name = 0; PyObject* module_dot = 0; PyObject* full_name = 0; PyErr_Clear(); module_name_str = PyModule_GetName(module); if (unlikely(!module_name_str)) { goto modbad; } module_name = PyUnicode_FromString(module_name_str); if (unlikely(!module_name)) { goto modbad; } module_dot = PyUnicode_Concat(module_name, __pyx_kp_u__56); if (unlikely(!module_dot)) { goto modbad; } full_name = PyUnicode_Concat(module_dot, name); if (unlikely(!full_name)) { goto modbad; } #if PY_VERSION_HEX < 0x030700A1 || (CYTHON_COMPILING_IN_PYPY && PYPY_VERSION_NUM < 0x07030400) { PyObject *modules = PyImport_GetModuleDict(); if (unlikely(!modules)) goto modbad; value = PyObject_GetItem(modules, full_name); } #else value = PyImport_GetModule(full_name); #endif modbad: Py_XDECREF(full_name); Py_XDECREF(module_dot); Py_XDECREF(module_name); } if (unlikely(!value)) { PyErr_Format(PyExc_ImportError, #if PY_MAJOR_VERSION < 3 "cannot import name %.230s", PyString_AS_STRING(name)); #else "cannot import name %S", name); #endif } return value; } /* GetItemInt */ static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { PyObject *r; if (unlikely(!j)) return NULL; r = PyObject_GetItem(o, j); Py_DECREF(j); return r; } static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, CYTHON_NCP_UNUSED int wraparound, CYTHON_NCP_UNUSED int boundscheck) { #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS Py_ssize_t wrapped_i = i; if (wraparound & unlikely(i < 0)) { wrapped_i += PyList_GET_SIZE(o); } if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyList_GET_SIZE(o)))) { PyObject *r = PyList_GET_ITEM(o, wrapped_i); Py_INCREF(r); return r; } return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); #else return PySequence_GetItem(o, i); #endif } static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, CYTHON_NCP_UNUSED int wraparound, CYTHON_NCP_UNUSED int boundscheck) { #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS Py_ssize_t wrapped_i = i; if (wraparound & unlikely(i < 0)) { wrapped_i += PyTuple_GET_SIZE(o); } if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyTuple_GET_SIZE(o)))) { PyObject *r = PyTuple_GET_ITEM(o, wrapped_i); Py_INCREF(r); return r; } return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); #else return PySequence_GetItem(o, i); #endif } static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, CYTHON_NCP_UNUSED int wraparound, CYTHON_NCP_UNUSED int boundscheck) { #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS && CYTHON_USE_TYPE_SLOTS if (is_list || PyList_CheckExact(o)) { Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); if ((!boundscheck) || (likely(__Pyx_is_valid_index(n, PyList_GET_SIZE(o))))) { PyObject *r = PyList_GET_ITEM(o, n); Py_INCREF(r); return r; } } else if (PyTuple_CheckExact(o)) { Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); if ((!boundscheck) || likely(__Pyx_is_valid_index(n, PyTuple_GET_SIZE(o)))) { PyObject *r = PyTuple_GET_ITEM(o, n); Py_INCREF(r); return r; } } else { PyMappingMethods *mm = Py_TYPE(o)->tp_as_mapping; PySequenceMethods *sm = Py_TYPE(o)->tp_as_sequence; if (mm && mm->mp_subscript) { PyObject *r, *key = PyInt_FromSsize_t(i); if (unlikely(!key)) return NULL; r = mm->mp_subscript(o, key); Py_DECREF(key); return r; } if (likely(sm && sm->sq_item)) { if (wraparound && unlikely(i < 0) && likely(sm->sq_length)) { Py_ssize_t l = sm->sq_length(o); if (likely(l >= 0)) { i += l; } else { if (!PyErr_ExceptionMatches(PyExc_OverflowError)) return NULL; PyErr_Clear(); } } return sm->sq_item(o, i); } } #else if (is_list || !PyMapping_Check(o)) { return PySequence_GetItem(o, i); } #endif return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); } /* GetAttr */ static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { #if CYTHON_USE_TYPE_SLOTS #if PY_MAJOR_VERSION >= 3 if (likely(PyUnicode_Check(n))) #else if (likely(PyString_Check(n))) #endif return __Pyx_PyObject_GetAttrStr(o, n); #endif return PyObject_GetAttr(o, n); } /* HasAttr */ static CYTHON_INLINE int __Pyx_HasAttr(PyObject *o, PyObject *n) { PyObject *r; if (unlikely(!__Pyx_PyBaseString_Check(n))) { PyErr_SetString(PyExc_TypeError, "hasattr(): attribute name must be string"); return -1; } r = __Pyx_GetAttr(o, n); if (!r) { PyErr_Clear(); return 0; } else { Py_DECREF(r); return 1; } } /* CallNextTpDealloc */ static void __Pyx_call_next_tp_dealloc(PyObject* obj, destructor current_tp_dealloc) { PyTypeObject* type = Py_TYPE(obj); destructor tp_dealloc = NULL; while (type && __Pyx_PyType_GetSlot(type, tp_dealloc, destructor) != current_tp_dealloc) type = __Pyx_PyType_GetSlot(type, tp_base, PyTypeObject*); while (type && (tp_dealloc = __Pyx_PyType_GetSlot(type, tp_dealloc, destructor)) == current_tp_dealloc) type = __Pyx_PyType_GetSlot(type, tp_base, PyTypeObject*); if (type) tp_dealloc(obj); } /* CallNextTpTraverse */ static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) { PyTypeObject* type = Py_TYPE(obj); traverseproc tp_traverse = NULL; while (type && __Pyx_PyType_GetSlot(type, tp_traverse, traverseproc) != current_tp_traverse) type = __Pyx_PyType_GetSlot(type, tp_base, PyTypeObject*); while (type && (tp_traverse = __Pyx_PyType_GetSlot(type, tp_traverse, traverseproc)) == current_tp_traverse) type = __Pyx_PyType_GetSlot(type, tp_base, PyTypeObject*); if (type && tp_traverse) return tp_traverse(obj, v, a); return 0; } /* CallNextTpClear */ static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) { PyTypeObject* type = Py_TYPE(obj); inquiry tp_clear = NULL; while (type && __Pyx_PyType_GetSlot(type, tp_clear, inquiry) != current_tp_clear) type = __Pyx_PyType_GetSlot(type, tp_base, PyTypeObject*); while (type && (tp_clear = __Pyx_PyType_GetSlot(type, tp_clear, inquiry)) == current_tp_clear) type = __Pyx_PyType_GetSlot(type, tp_base, PyTypeObject*); if (type && tp_clear) tp_clear(obj); } /* FixUpExtensionType */ #if CYTHON_USE_TYPE_SPECS static int __Pyx_fix_up_extension_type_from_spec(PyType_Spec *spec, PyTypeObject *type) { #if PY_VERSION_HEX > 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API CYTHON_UNUSED_VAR(spec); CYTHON_UNUSED_VAR(type); #else const PyType_Slot *slot = spec->slots; while (slot && slot->slot && slot->slot != Py_tp_members) slot++; if (slot && slot->slot == Py_tp_members) { int changed = 0; #if !(PY_VERSION_HEX <= 0x030900b1 && CYTHON_COMPILING_IN_CPYTHON) const #endif PyMemberDef *memb = (PyMemberDef*) slot->pfunc; while (memb && memb->name) { if (memb->name[0] == '_' && memb->name[1] == '_') { #if PY_VERSION_HEX < 0x030900b1 if (strcmp(memb->name, "__weaklistoffset__") == 0) { assert(memb->type == T_PYSSIZET); assert(memb->flags == READONLY); type->tp_weaklistoffset = memb->offset; changed = 1; } else if (strcmp(memb->name, "__dictoffset__") == 0) { assert(memb->type == T_PYSSIZET); assert(memb->flags == READONLY); type->tp_dictoffset = memb->offset; changed = 1; } #if CYTHON_METH_FASTCALL else if (strcmp(memb->name, "__vectorcalloffset__") == 0) { assert(memb->type == T_PYSSIZET); assert(memb->flags == READONLY); #if PY_VERSION_HEX >= 0x030800b4 type->tp_vectorcall_offset = memb->offset; #else type->tp_print = (printfunc) memb->offset; #endif changed = 1; } #endif #else if ((0)); #endif #if PY_VERSION_HEX <= 0x030900b1 && CYTHON_COMPILING_IN_CPYTHON else if (strcmp(memb->name, "__module__") == 0) { PyObject *descr; assert(memb->type == T_OBJECT); assert(memb->flags == 0 || memb->flags == READONLY); descr = PyDescr_NewMember(type, memb); if (unlikely(!descr)) return -1; if (unlikely(PyDict_SetItem(type->tp_dict, PyDescr_NAME(descr), descr) < 0)) { Py_DECREF(descr); return -1; } Py_DECREF(descr); changed = 1; } #endif } memb++; } if (changed) PyType_Modified(type); } #endif return 0; } #endif /* PyObjectGetMethod */ static int __Pyx_PyObject_GetMethod(PyObject *obj, PyObject *name, PyObject **method) { PyObject *attr; #if CYTHON_UNPACK_METHODS && CYTHON_COMPILING_IN_CPYTHON && CYTHON_USE_PYTYPE_LOOKUP __Pyx_TypeName type_name; PyTypeObject *tp = Py_TYPE(obj); PyObject *descr; descrgetfunc f = NULL; PyObject **dictptr, *dict; int meth_found = 0; assert (*method == NULL); if (unlikely(tp->tp_getattro != PyObject_GenericGetAttr)) { attr = __Pyx_PyObject_GetAttrStr(obj, name); goto try_unpack; } if (unlikely(tp->tp_dict == NULL) && unlikely(PyType_Ready(tp) < 0)) { return 0; } descr = _PyType_Lookup(tp, name); if (likely(descr != NULL)) { Py_INCREF(descr); #if defined(Py_TPFLAGS_METHOD_DESCRIPTOR) && Py_TPFLAGS_METHOD_DESCRIPTOR if (__Pyx_PyType_HasFeature(Py_TYPE(descr), Py_TPFLAGS_METHOD_DESCRIPTOR)) #elif PY_MAJOR_VERSION >= 3 #ifdef __Pyx_CyFunction_USED if (likely(PyFunction_Check(descr) || __Pyx_IS_TYPE(descr, &PyMethodDescr_Type) || __Pyx_CyFunction_Check(descr))) #else if (likely(PyFunction_Check(descr) || __Pyx_IS_TYPE(descr, &PyMethodDescr_Type))) #endif #else #ifdef __Pyx_CyFunction_USED if (likely(PyFunction_Check(descr) || __Pyx_CyFunction_Check(descr))) #else if (likely(PyFunction_Check(descr))) #endif #endif { meth_found = 1; } else { f = Py_TYPE(descr)->tp_descr_get; if (f != NULL && PyDescr_IsData(descr)) { attr = f(descr, obj, (PyObject *)Py_TYPE(obj)); Py_DECREF(descr); goto try_unpack; } } } dictptr = _PyObject_GetDictPtr(obj); if (dictptr != NULL && (dict = *dictptr) != NULL) { Py_INCREF(dict); attr = __Pyx_PyDict_GetItemStr(dict, name); if (attr != NULL) { Py_INCREF(attr); Py_DECREF(dict); Py_XDECREF(descr); goto try_unpack; } Py_DECREF(dict); } if (meth_found) { *method = descr; return 1; } if (f != NULL) { attr = f(descr, obj, (PyObject *)Py_TYPE(obj)); Py_DECREF(descr); goto try_unpack; } if (likely(descr != NULL)) { *method = descr; return 0; } type_name = __Pyx_PyType_GetName(tp); PyErr_Format(PyExc_AttributeError, #if PY_MAJOR_VERSION >= 3 "'" __Pyx_FMT_TYPENAME "' object has no attribute '%U'", type_name, name); #else "'" __Pyx_FMT_TYPENAME "' object has no attribute '%.400s'", type_name, PyString_AS_STRING(name)); #endif __Pyx_DECREF_TypeName(type_name); return 0; #else attr = __Pyx_PyObject_GetAttrStr(obj, name); goto try_unpack; #endif try_unpack: #if CYTHON_UNPACK_METHODS if (likely(attr) && PyMethod_Check(attr) && likely(PyMethod_GET_SELF(attr) == obj)) { PyObject *function = PyMethod_GET_FUNCTION(attr); Py_INCREF(function); Py_DECREF(attr); *method = function; return 1; } #endif *method = attr; return 0; } /* PyObjectCallMethod0 */ static PyObject* __Pyx_PyObject_CallMethod0(PyObject* obj, PyObject* method_name) { PyObject *method = NULL, *result = NULL; int is_method = __Pyx_PyObject_GetMethod(obj, method_name, &method); if (likely(is_method)) { result = __Pyx_PyObject_CallOneArg(method, obj); Py_DECREF(method); return result; } if (unlikely(!method)) goto bad; result = __Pyx_PyObject_CallNoArg(method); Py_DECREF(method); bad: return result; } /* ValidateBasesTuple */ #if CYTHON_COMPILING_IN_CPYTHON || CYTHON_COMPILING_IN_LIMITED_API || CYTHON_USE_TYPE_SPECS static int __Pyx_validate_bases_tuple(const char *type_name, Py_ssize_t dictoffset, PyObject *bases) { Py_ssize_t i, n; #if CYTHON_ASSUME_SAFE_MACROS n = PyTuple_GET_SIZE(bases); #else n = PyTuple_Size(bases); if (n < 0) return -1; #endif for (i = 1; i < n; i++) { #if CYTHON_AVOID_BORROWED_REFS PyObject *b0 = PySequence_GetItem(bases, i); if (!b0) return -1; #elif CYTHON_ASSUME_SAFE_MACROS PyObject *b0 = PyTuple_GET_ITEM(bases, i); #else PyObject *b0 = PyTuple_GetItem(bases, i); if (!b0) return -1; #endif PyTypeObject *b; #if PY_MAJOR_VERSION < 3 if (PyClass_Check(b0)) { PyErr_Format(PyExc_TypeError, "base class '%.200s' is an old-style class", PyString_AS_STRING(((PyClassObject*)b0)->cl_name)); #if CYTHON_AVOID_BORROWED_REFS Py_DECREF(b0); #endif return -1; } #endif b = (PyTypeObject*) b0; if (!__Pyx_PyType_HasFeature(b, Py_TPFLAGS_HEAPTYPE)) { __Pyx_TypeName b_name = __Pyx_PyType_GetName(b); PyErr_Format(PyExc_TypeError, "base class '" __Pyx_FMT_TYPENAME "' is not a heap type", b_name); __Pyx_DECREF_TypeName(b_name); #if CYTHON_AVOID_BORROWED_REFS Py_DECREF(b0); #endif return -1; } if (dictoffset == 0) { Py_ssize_t b_dictoffset = 0; #if CYTHON_USE_TYPE_SLOTS || CYTHON_COMPILING_IN_PYPY b_dictoffset = b->tp_dictoffset; #else PyObject *py_b_dictoffset = PyObject_GetAttrString((PyObject*)b, "__dictoffset__"); if (!py_b_dictoffset) goto dictoffset_return; b_dictoffset = PyLong_AsSsize_t(py_b_dictoffset); Py_DECREF(py_b_dictoffset); if (b_dictoffset == -1 && PyErr_Occurred()) goto dictoffset_return; #endif if (b_dictoffset) { { __Pyx_TypeName b_name = __Pyx_PyType_GetName(b); PyErr_Format(PyExc_TypeError, "extension type '%.200s' has no __dict__ slot, " "but base type '" __Pyx_FMT_TYPENAME "' has: " "either add 'cdef dict __dict__' to the extension type " "or add '__slots__ = [...]' to the base type", type_name, b_name); __Pyx_DECREF_TypeName(b_name); } #if !(CYTHON_USE_TYPE_SLOTS || CYTHON_COMPILING_IN_PYPY) dictoffset_return: #endif #if CYTHON_AVOID_BORROWED_REFS Py_DECREF(b0); #endif return -1; } } #if CYTHON_AVOID_BORROWED_REFS Py_DECREF(b0); #endif } return 0; } #endif /* PyType_Ready */ static int __Pyx_PyType_Ready(PyTypeObject *t) { #if CYTHON_USE_TYPE_SPECS || !(CYTHON_COMPILING_IN_CPYTHON || CYTHON_COMPILING_IN_LIMITED_API) || defined(PYSTON_MAJOR_VERSION) (void)__Pyx_PyObject_CallMethod0; #if CYTHON_USE_TYPE_SPECS (void)__Pyx_validate_bases_tuple; #endif return PyType_Ready(t); #else int r; PyObject *bases = __Pyx_PyType_GetSlot(t, tp_bases, PyObject*); if (bases && unlikely(__Pyx_validate_bases_tuple(t->tp_name, t->tp_dictoffset, bases) == -1)) return -1; #if PY_VERSION_HEX >= 0x03050000 && !defined(PYSTON_MAJOR_VERSION) { int gc_was_enabled; #if PY_VERSION_HEX >= 0x030A00b1 gc_was_enabled = PyGC_Disable(); (void)__Pyx_PyObject_CallMethod0; #else PyObject *ret, *py_status; PyObject *gc = NULL; #if PY_VERSION_HEX >= 0x030700a1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM+0 >= 0x07030400) gc = PyImport_GetModule(__pyx_kp_u_gc); #endif if (unlikely(!gc)) gc = PyImport_Import(__pyx_kp_u_gc); if (unlikely(!gc)) return -1; py_status = __Pyx_PyObject_CallMethod0(gc, __pyx_kp_u_isenabled); if (unlikely(!py_status)) { Py_DECREF(gc); return -1; } gc_was_enabled = __Pyx_PyObject_IsTrue(py_status); Py_DECREF(py_status); if (gc_was_enabled > 0) { ret = __Pyx_PyObject_CallMethod0(gc, __pyx_kp_u_disable); if (unlikely(!ret)) { Py_DECREF(gc); return -1; } Py_DECREF(ret); } else if (unlikely(gc_was_enabled == -1)) { Py_DECREF(gc); return -1; } #endif t->tp_flags |= Py_TPFLAGS_HEAPTYPE; #if PY_VERSION_HEX >= 0x030A0000 t->tp_flags |= Py_TPFLAGS_IMMUTABLETYPE; #endif #else (void)__Pyx_PyObject_CallMethod0; #endif r = PyType_Ready(t); #if PY_VERSION_HEX >= 0x03050000 && !defined(PYSTON_MAJOR_VERSION) t->tp_flags &= ~Py_TPFLAGS_HEAPTYPE; #if PY_VERSION_HEX >= 0x030A00b1 if (gc_was_enabled) PyGC_Enable(); #else if (gc_was_enabled) { PyObject *tp, *v, *tb; PyErr_Fetch(&tp, &v, &tb); ret = __Pyx_PyObject_CallMethod0(gc, __pyx_kp_u_enable); if (likely(ret || r == -1)) { Py_XDECREF(ret); PyErr_Restore(tp, v, tb); } else { Py_XDECREF(tp); Py_XDECREF(v); Py_XDECREF(tb); r = -1; } } Py_DECREF(gc); #endif } #endif return r; #endif } /* PyObject_GenericGetAttrNoDict */ #if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 static PyObject *__Pyx_RaiseGenericGetAttributeError(PyTypeObject *tp, PyObject *attr_name) { __Pyx_TypeName type_name = __Pyx_PyType_GetName(tp); PyErr_Format(PyExc_AttributeError, #if PY_MAJOR_VERSION >= 3 "'" __Pyx_FMT_TYPENAME "' object has no attribute '%U'", type_name, attr_name); #else "'" __Pyx_FMT_TYPENAME "' object has no attribute '%.400s'", type_name, PyString_AS_STRING(attr_name)); #endif __Pyx_DECREF_TypeName(type_name); return NULL; } static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name) { PyObject *descr; PyTypeObject *tp = Py_TYPE(obj); if (unlikely(!PyString_Check(attr_name))) { return PyObject_GenericGetAttr(obj, attr_name); } assert(!tp->tp_dictoffset); descr = _PyType_Lookup(tp, attr_name); if (unlikely(!descr)) { return __Pyx_RaiseGenericGetAttributeError(tp, attr_name); } Py_INCREF(descr); #if PY_MAJOR_VERSION < 3 if (likely(PyType_HasFeature(Py_TYPE(descr), Py_TPFLAGS_HAVE_CLASS))) #endif { descrgetfunc f = Py_TYPE(descr)->tp_descr_get; if (unlikely(f)) { PyObject *res = f(descr, obj, (PyObject *)tp); Py_DECREF(descr); return res; } } return descr; } #endif /* PyObject_GenericGetAttr */ #if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name) { if (unlikely(Py_TYPE(obj)->tp_dictoffset)) { return PyObject_GenericGetAttr(obj, attr_name); } return __Pyx_PyObject_GenericGetAttrNoDict(obj, attr_name); } #endif /* SetVTable */ static int __Pyx_SetVtable(PyTypeObject *type, void *vtable) { PyObject *ob = PyCapsule_New(vtable, 0, 0); if (unlikely(!ob)) goto bad; #if CYTHON_COMPILING_IN_LIMITED_API if (unlikely(PyObject_SetAttr((PyObject *) type, __pyx_n_s_pyx_vtable, ob) < 0)) #else if (unlikely(PyDict_SetItem(type->tp_dict, __pyx_n_s_pyx_vtable, ob) < 0)) #endif goto bad; Py_DECREF(ob); return 0; bad: Py_XDECREF(ob); return -1; } /* GetVTable */ static void* __Pyx_GetVtable(PyTypeObject *type) { void* ptr; #if CYTHON_COMPILING_IN_LIMITED_API PyObject *ob = PyObject_GetAttr((PyObject *)type, __pyx_n_s_pyx_vtable); #else PyObject *ob = PyObject_GetItem(type->tp_dict, __pyx_n_s_pyx_vtable); #endif if (!ob) goto bad; ptr = PyCapsule_GetPointer(ob, 0); if (!ptr && !PyErr_Occurred()) PyErr_SetString(PyExc_RuntimeError, "invalid vtable found for imported type"); Py_DECREF(ob); return ptr; bad: Py_XDECREF(ob); return NULL; } /* MergeVTables */ #if !CYTHON_COMPILING_IN_LIMITED_API static int __Pyx_MergeVtables(PyTypeObject *type) { int i; void** base_vtables; __Pyx_TypeName tp_base_name; __Pyx_TypeName base_name; void* unknown = (void*)-1; PyObject* bases = type->tp_bases; int base_depth = 0; { PyTypeObject* base = type->tp_base; while (base) { base_depth += 1; base = base->tp_base; } } base_vtables = (void**) malloc(sizeof(void*) * (size_t)(base_depth + 1)); base_vtables[0] = unknown; for (i = 1; i < PyTuple_GET_SIZE(bases); i++) { void* base_vtable = __Pyx_GetVtable(((PyTypeObject*)PyTuple_GET_ITEM(bases, i))); if (base_vtable != NULL) { int j; PyTypeObject* base = type->tp_base; for (j = 0; j < base_depth; j++) { if (base_vtables[j] == unknown) { base_vtables[j] = __Pyx_GetVtable(base); base_vtables[j + 1] = unknown; } if (base_vtables[j] == base_vtable) { break; } else if (base_vtables[j] == NULL) { goto bad; } base = base->tp_base; } } } PyErr_Clear(); free(base_vtables); return 0; bad: tp_base_name = __Pyx_PyType_GetName(type->tp_base); base_name = __Pyx_PyType_GetName((PyTypeObject*)PyTuple_GET_ITEM(bases, i)); PyErr_Format(PyExc_TypeError, "multiple bases have vtable conflict: '" __Pyx_FMT_TYPENAME "' and '" __Pyx_FMT_TYPENAME "'", tp_base_name, base_name); __Pyx_DECREF_TypeName(tp_base_name); __Pyx_DECREF_TypeName(base_name); free(base_vtables); return -1; } #endif /* SetupReduce */ #if !CYTHON_COMPILING_IN_LIMITED_API static int __Pyx_setup_reduce_is_named(PyObject* meth, PyObject* name) { int ret; PyObject *name_attr; name_attr = __Pyx_PyObject_GetAttrStrNoError(meth, __pyx_n_s_name); if (likely(name_attr)) { ret = PyObject_RichCompareBool(name_attr, name, Py_EQ); } else { ret = -1; } if (unlikely(ret < 0)) { PyErr_Clear(); ret = 0; } Py_XDECREF(name_attr); return ret; } static int __Pyx_setup_reduce(PyObject* type_obj) { int ret = 0; PyObject *object_reduce = NULL; PyObject *object_getstate = NULL; PyObject *object_reduce_ex = NULL; PyObject *reduce = NULL; PyObject *reduce_ex = NULL; PyObject *reduce_cython = NULL; PyObject *setstate = NULL; PyObject *setstate_cython = NULL; PyObject *getstate = NULL; #if CYTHON_USE_PYTYPE_LOOKUP getstate = _PyType_Lookup((PyTypeObject*)type_obj, __pyx_n_s_getstate); #else getstate = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_getstate); if (!getstate && PyErr_Occurred()) { goto __PYX_BAD; } #endif if (getstate) { #if CYTHON_USE_PYTYPE_LOOKUP object_getstate = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_getstate); #else object_getstate = __Pyx_PyObject_GetAttrStrNoError((PyObject*)&PyBaseObject_Type, __pyx_n_s_getstate); if (!object_getstate && PyErr_Occurred()) { goto __PYX_BAD; } #endif if (object_getstate != getstate) { goto __PYX_GOOD; } } #if CYTHON_USE_PYTYPE_LOOKUP object_reduce_ex = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto __PYX_BAD; #else object_reduce_ex = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto __PYX_BAD; #endif reduce_ex = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce_ex); if (unlikely(!reduce_ex)) goto __PYX_BAD; if (reduce_ex == object_reduce_ex) { #if CYTHON_USE_PYTYPE_LOOKUP object_reduce = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto __PYX_BAD; #else object_reduce = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto __PYX_BAD; #endif reduce = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce); if (unlikely(!reduce)) goto __PYX_BAD; if (reduce == object_reduce || __Pyx_setup_reduce_is_named(reduce, __pyx_n_s_reduce_cython)) { reduce_cython = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_reduce_cython); if (likely(reduce_cython)) { ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce, reduce_cython); if (unlikely(ret < 0)) goto __PYX_BAD; ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce_cython); if (unlikely(ret < 0)) goto __PYX_BAD; } else if (reduce == object_reduce || PyErr_Occurred()) { goto __PYX_BAD; } setstate = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_setstate); if (!setstate) PyErr_Clear(); if (!setstate || __Pyx_setup_reduce_is_named(setstate, __pyx_n_s_setstate_cython)) { setstate_cython = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_setstate_cython); if (likely(setstate_cython)) { ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate, setstate_cython); if (unlikely(ret < 0)) goto __PYX_BAD; ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate_cython); if (unlikely(ret < 0)) goto __PYX_BAD; } else if (!setstate || PyErr_Occurred()) { goto __PYX_BAD; } } PyType_Modified((PyTypeObject*)type_obj); } } goto __PYX_GOOD; __PYX_BAD: if (!PyErr_Occurred()) { __Pyx_TypeName type_obj_name = __Pyx_PyType_GetName((PyTypeObject*)type_obj); PyErr_Format(PyExc_RuntimeError, "Unable to initialize pickling for " __Pyx_FMT_TYPENAME, type_obj_name); __Pyx_DECREF_TypeName(type_obj_name); } ret = -1; __PYX_GOOD: #if !CYTHON_USE_PYTYPE_LOOKUP Py_XDECREF(object_reduce); Py_XDECREF(object_reduce_ex); Py_XDECREF(object_getstate); Py_XDECREF(getstate); #endif Py_XDECREF(reduce); Py_XDECREF(reduce_ex); Py_XDECREF(reduce_cython); Py_XDECREF(setstate); Py_XDECREF(setstate_cython); return ret; } #endif /* TypeImport */ #ifndef __PYX_HAVE_RT_ImportType_3_0_11 #define __PYX_HAVE_RT_ImportType_3_0_11 static PyTypeObject *__Pyx_ImportType_3_0_11(PyObject *module, const char *module_name, const char *class_name, size_t size, size_t alignment, enum __Pyx_ImportType_CheckSize_3_0_11 check_size) { PyObject *result = 0; char warning[200]; Py_ssize_t basicsize; Py_ssize_t itemsize; #if CYTHON_COMPILING_IN_LIMITED_API PyObject *py_basicsize; PyObject *py_itemsize; #endif result = PyObject_GetAttrString(module, class_name); if (!result) goto bad; if (!PyType_Check(result)) { PyErr_Format(PyExc_TypeError, "%.200s.%.200s is not a type object", module_name, class_name); goto bad; } #if !CYTHON_COMPILING_IN_LIMITED_API basicsize = ((PyTypeObject *)result)->tp_basicsize; itemsize = ((PyTypeObject *)result)->tp_itemsize; #else py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); if (!py_basicsize) goto bad; basicsize = PyLong_AsSsize_t(py_basicsize); Py_DECREF(py_basicsize); py_basicsize = 0; if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) goto bad; py_itemsize = PyObject_GetAttrString(result, "__itemsize__"); if (!py_itemsize) goto bad; itemsize = PyLong_AsSsize_t(py_itemsize); Py_DECREF(py_itemsize); py_itemsize = 0; if (itemsize == (Py_ssize_t)-1 && PyErr_Occurred()) goto bad; #endif if (itemsize) { if (size % alignment) { alignment = size % alignment; } if (itemsize < (Py_ssize_t)alignment) itemsize = (Py_ssize_t)alignment; } if ((size_t)(basicsize + itemsize) < size) { PyErr_Format(PyExc_ValueError, "%.200s.%.200s size changed, may indicate binary incompatibility. " "Expected %zd from C header, got %zd from PyObject", module_name, class_name, size, basicsize+itemsize); goto bad; } if (check_size == __Pyx_ImportType_CheckSize_Error_3_0_11 && ((size_t)basicsize > size || (size_t)(basicsize + itemsize) < size)) { PyErr_Format(PyExc_ValueError, "%.200s.%.200s size changed, may indicate binary incompatibility. " "Expected %zd from C header, got %zd-%zd from PyObject", module_name, class_name, size, basicsize, basicsize+itemsize); goto bad; } else if (check_size == __Pyx_ImportType_CheckSize_Warn_3_0_11 && (size_t)basicsize > size) { PyOS_snprintf(warning, sizeof(warning), "%s.%s size changed, may indicate binary incompatibility. " "Expected %zd from C header, got %zd from PyObject", module_name, class_name, size, basicsize); if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; } return (PyTypeObject *)result; bad: Py_XDECREF(result); return NULL; } #endif /* ImportDottedModule */ #if PY_MAJOR_VERSION >= 3 static PyObject *__Pyx__ImportDottedModule_Error(PyObject *name, PyObject *parts_tuple, Py_ssize_t count) { PyObject *partial_name = NULL, *slice = NULL, *sep = NULL; if (unlikely(PyErr_Occurred())) { PyErr_Clear(); } if (likely(PyTuple_GET_SIZE(parts_tuple) == count)) { partial_name = name; } else { slice = PySequence_GetSlice(parts_tuple, 0, count); if (unlikely(!slice)) goto bad; sep = PyUnicode_FromStringAndSize(".", 1); if (unlikely(!sep)) goto bad; partial_name = PyUnicode_Join(sep, slice); } PyErr_Format( #if PY_MAJOR_VERSION < 3 PyExc_ImportError, "No module named '%s'", PyString_AS_STRING(partial_name)); #else #if PY_VERSION_HEX >= 0x030600B1 PyExc_ModuleNotFoundError, #else PyExc_ImportError, #endif "No module named '%U'", partial_name); #endif bad: Py_XDECREF(sep); Py_XDECREF(slice); Py_XDECREF(partial_name); return NULL; } #endif #if PY_MAJOR_VERSION >= 3 static PyObject *__Pyx__ImportDottedModule_Lookup(PyObject *name) { PyObject *imported_module; #if PY_VERSION_HEX < 0x030700A1 || (CYTHON_COMPILING_IN_PYPY && PYPY_VERSION_NUM < 0x07030400) PyObject *modules = PyImport_GetModuleDict(); if (unlikely(!modules)) return NULL; imported_module = __Pyx_PyDict_GetItemStr(modules, name); Py_XINCREF(imported_module); #else imported_module = PyImport_GetModule(name); #endif return imported_module; } #endif #if PY_MAJOR_VERSION >= 3 static PyObject *__Pyx_ImportDottedModule_WalkParts(PyObject *module, PyObject *name, PyObject *parts_tuple) { Py_ssize_t i, nparts; nparts = PyTuple_GET_SIZE(parts_tuple); for (i=1; i < nparts && module; i++) { PyObject *part, *submodule; #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS part = PyTuple_GET_ITEM(parts_tuple, i); #else part = PySequence_ITEM(parts_tuple, i); #endif submodule = __Pyx_PyObject_GetAttrStrNoError(module, part); #if !(CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS) Py_DECREF(part); #endif Py_DECREF(module); module = submodule; } if (unlikely(!module)) { return __Pyx__ImportDottedModule_Error(name, parts_tuple, i); } return module; } #endif static PyObject *__Pyx__ImportDottedModule(PyObject *name, PyObject *parts_tuple) { #if PY_MAJOR_VERSION < 3 PyObject *module, *from_list, *star = __pyx_n_s__62; CYTHON_UNUSED_VAR(parts_tuple); from_list = PyList_New(1); if (unlikely(!from_list)) return NULL; Py_INCREF(star); PyList_SET_ITEM(from_list, 0, star); module = __Pyx_Import(name, from_list, 0); Py_DECREF(from_list); return module; #else PyObject *imported_module; PyObject *module = __Pyx_Import(name, NULL, 0); if (!parts_tuple || unlikely(!module)) return module; imported_module = __Pyx__ImportDottedModule_Lookup(name); if (likely(imported_module)) { Py_DECREF(module); return imported_module; } PyErr_Clear(); return __Pyx_ImportDottedModule_WalkParts(module, name, parts_tuple); #endif } static PyObject *__Pyx_ImportDottedModule(PyObject *name, PyObject *parts_tuple) { #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030400B1 PyObject *module = __Pyx__ImportDottedModule_Lookup(name); if (likely(module)) { PyObject *spec = __Pyx_PyObject_GetAttrStrNoError(module, __pyx_n_s_spec); if (likely(spec)) { PyObject *unsafe = __Pyx_PyObject_GetAttrStrNoError(spec, __pyx_n_s_initializing); if (likely(!unsafe || !__Pyx_PyObject_IsTrue(unsafe))) { Py_DECREF(spec); spec = NULL; } Py_XDECREF(unsafe); } if (likely(!spec)) { PyErr_Clear(); return module; } Py_DECREF(spec); Py_DECREF(module); } else if (PyErr_Occurred()) { PyErr_Clear(); } #endif return __Pyx__ImportDottedModule(name, parts_tuple); } /* FetchSharedCythonModule */ static PyObject *__Pyx_FetchSharedCythonABIModule(void) { return __Pyx_PyImport_AddModuleRef((char*) __PYX_ABI_MODULE_NAME); } /* FetchCommonType */ static int __Pyx_VerifyCachedType(PyObject *cached_type, const char *name, Py_ssize_t basicsize, Py_ssize_t expected_basicsize) { if (!PyType_Check(cached_type)) { PyErr_Format(PyExc_TypeError, "Shared Cython type %.200s is not a type object", name); return -1; } if (basicsize != expected_basicsize) { PyErr_Format(PyExc_TypeError, "Shared Cython type %.200s has the wrong size, try recompiling", name); return -1; } return 0; } #if !CYTHON_USE_TYPE_SPECS static PyTypeObject* __Pyx_FetchCommonType(PyTypeObject* type) { PyObject* abi_module; const char* object_name; PyTypeObject *cached_type = NULL; abi_module = __Pyx_FetchSharedCythonABIModule(); if (!abi_module) return NULL; object_name = strrchr(type->tp_name, '.'); object_name = object_name ? object_name+1 : type->tp_name; cached_type = (PyTypeObject*) PyObject_GetAttrString(abi_module, object_name); if (cached_type) { if (__Pyx_VerifyCachedType( (PyObject *)cached_type, object_name, cached_type->tp_basicsize, type->tp_basicsize) < 0) { goto bad; } goto done; } if (!PyErr_ExceptionMatches(PyExc_AttributeError)) goto bad; PyErr_Clear(); if (PyType_Ready(type) < 0) goto bad; if (PyObject_SetAttrString(abi_module, object_name, (PyObject *)type) < 0) goto bad; Py_INCREF(type); cached_type = type; done: Py_DECREF(abi_module); return cached_type; bad: Py_XDECREF(cached_type); cached_type = NULL; goto done; } #else static PyTypeObject *__Pyx_FetchCommonTypeFromSpec(PyObject *module, PyType_Spec *spec, PyObject *bases) { PyObject *abi_module, *cached_type = NULL; const char* object_name = strrchr(spec->name, '.'); object_name = object_name ? object_name+1 : spec->name; abi_module = __Pyx_FetchSharedCythonABIModule(); if (!abi_module) return NULL; cached_type = PyObject_GetAttrString(abi_module, object_name); if (cached_type) { Py_ssize_t basicsize; #if CYTHON_COMPILING_IN_LIMITED_API PyObject *py_basicsize; py_basicsize = PyObject_GetAttrString(cached_type, "__basicsize__"); if (unlikely(!py_basicsize)) goto bad; basicsize = PyLong_AsSsize_t(py_basicsize); Py_DECREF(py_basicsize); py_basicsize = 0; if (unlikely(basicsize == (Py_ssize_t)-1) && PyErr_Occurred()) goto bad; #else basicsize = likely(PyType_Check(cached_type)) ? ((PyTypeObject*) cached_type)->tp_basicsize : -1; #endif if (__Pyx_VerifyCachedType( cached_type, object_name, basicsize, spec->basicsize) < 0) { goto bad; } goto done; } if (!PyErr_ExceptionMatches(PyExc_AttributeError)) goto bad; PyErr_Clear(); CYTHON_UNUSED_VAR(module); cached_type = __Pyx_PyType_FromModuleAndSpec(abi_module, spec, bases); if (unlikely(!cached_type)) goto bad; if (unlikely(__Pyx_fix_up_extension_type_from_spec(spec, (PyTypeObject *) cached_type) < 0)) goto bad; if (PyObject_SetAttrString(abi_module, object_name, cached_type) < 0) goto bad; done: Py_DECREF(abi_module); assert(cached_type == NULL || PyType_Check(cached_type)); return (PyTypeObject *) cached_type; bad: Py_XDECREF(cached_type); cached_type = NULL; goto done; } #endif /* PyVectorcallFastCallDict */ #if CYTHON_METH_FASTCALL static PyObject *__Pyx_PyVectorcall_FastCallDict_kw(PyObject *func, __pyx_vectorcallfunc vc, PyObject *const *args, size_t nargs, PyObject *kw) { PyObject *res = NULL; PyObject *kwnames; PyObject **newargs; PyObject **kwvalues; Py_ssize_t i, pos; size_t j; PyObject *key, *value; unsigned long keys_are_strings; Py_ssize_t nkw = PyDict_GET_SIZE(kw); newargs = (PyObject **)PyMem_Malloc((nargs + (size_t)nkw) * sizeof(args[0])); if (unlikely(newargs == NULL)) { PyErr_NoMemory(); return NULL; } for (j = 0; j < nargs; j++) newargs[j] = args[j]; kwnames = PyTuple_New(nkw); if (unlikely(kwnames == NULL)) { PyMem_Free(newargs); return NULL; } kwvalues = newargs + nargs; pos = i = 0; keys_are_strings = Py_TPFLAGS_UNICODE_SUBCLASS; while (PyDict_Next(kw, &pos, &key, &value)) { keys_are_strings &= Py_TYPE(key)->tp_flags; Py_INCREF(key); Py_INCREF(value); PyTuple_SET_ITEM(kwnames, i, key); kwvalues[i] = value; i++; } if (unlikely(!keys_are_strings)) { PyErr_SetString(PyExc_TypeError, "keywords must be strings"); goto cleanup; } res = vc(func, newargs, nargs, kwnames); cleanup: Py_DECREF(kwnames); for (i = 0; i < nkw; i++) Py_DECREF(kwvalues[i]); PyMem_Free(newargs); return res; } static CYTHON_INLINE PyObject *__Pyx_PyVectorcall_FastCallDict(PyObject *func, __pyx_vectorcallfunc vc, PyObject *const *args, size_t nargs, PyObject *kw) { if (likely(kw == NULL) || PyDict_GET_SIZE(kw) == 0) { return vc(func, args, nargs, NULL); } return __Pyx_PyVectorcall_FastCallDict_kw(func, vc, args, nargs, kw); } #endif /* CythonFunctionShared */ #if CYTHON_COMPILING_IN_LIMITED_API static CYTHON_INLINE int __Pyx__IsSameCyOrCFunction(PyObject *func, void *cfunc) { if (__Pyx_CyFunction_Check(func)) { return PyCFunction_GetFunction(((__pyx_CyFunctionObject*)func)->func) == (PyCFunction) cfunc; } else if (PyCFunction_Check(func)) { return PyCFunction_GetFunction(func) == (PyCFunction) cfunc; } return 0; } #else static CYTHON_INLINE int __Pyx__IsSameCyOrCFunction(PyObject *func, void *cfunc) { return __Pyx_CyOrPyCFunction_Check(func) && __Pyx_CyOrPyCFunction_GET_FUNCTION(func) == (PyCFunction) cfunc; } #endif static CYTHON_INLINE void __Pyx__CyFunction_SetClassObj(__pyx_CyFunctionObject* f, PyObject* classobj) { #if PY_VERSION_HEX < 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API __Pyx_Py_XDECREF_SET( __Pyx_CyFunction_GetClassObj(f), ((classobj) ? __Pyx_NewRef(classobj) : NULL)); #else __Pyx_Py_XDECREF_SET( ((PyCMethodObject *) (f))->mm_class, (PyTypeObject*)((classobj) ? __Pyx_NewRef(classobj) : NULL)); #endif } static PyObject * __Pyx_CyFunction_get_doc(__pyx_CyFunctionObject *op, void *closure) { CYTHON_UNUSED_VAR(closure); if (unlikely(op->func_doc == NULL)) { #if CYTHON_COMPILING_IN_LIMITED_API op->func_doc = PyObject_GetAttrString(op->func, "__doc__"); if (unlikely(!op->func_doc)) return NULL; #else if (((PyCFunctionObject*)op)->m_ml->ml_doc) { #if PY_MAJOR_VERSION >= 3 op->func_doc = PyUnicode_FromString(((PyCFunctionObject*)op)->m_ml->ml_doc); #else op->func_doc = PyString_FromString(((PyCFunctionObject*)op)->m_ml->ml_doc); #endif if (unlikely(op->func_doc == NULL)) return NULL; } else { Py_INCREF(Py_None); return Py_None; } #endif } Py_INCREF(op->func_doc); return op->func_doc; } static int __Pyx_CyFunction_set_doc(__pyx_CyFunctionObject *op, PyObject *value, void *context) { CYTHON_UNUSED_VAR(context); if (value == NULL) { value = Py_None; } Py_INCREF(value); __Pyx_Py_XDECREF_SET(op->func_doc, value); return 0; } static PyObject * __Pyx_CyFunction_get_name(__pyx_CyFunctionObject *op, void *context) { CYTHON_UNUSED_VAR(context); if (unlikely(op->func_name == NULL)) { #if CYTHON_COMPILING_IN_LIMITED_API op->func_name = PyObject_GetAttrString(op->func, "__name__"); #elif PY_MAJOR_VERSION >= 3 op->func_name = PyUnicode_InternFromString(((PyCFunctionObject*)op)->m_ml->ml_name); #else op->func_name = PyString_InternFromString(((PyCFunctionObject*)op)->m_ml->ml_name); #endif if (unlikely(op->func_name == NULL)) return NULL; } Py_INCREF(op->func_name); return op->func_name; } static int __Pyx_CyFunction_set_name(__pyx_CyFunctionObject *op, PyObject *value, void *context) { CYTHON_UNUSED_VAR(context); #if PY_MAJOR_VERSION >= 3 if (unlikely(value == NULL || !PyUnicode_Check(value))) #else if (unlikely(value == NULL || !PyString_Check(value))) #endif { PyErr_SetString(PyExc_TypeError, "__name__ must be set to a string object"); return -1; } Py_INCREF(value); __Pyx_Py_XDECREF_SET(op->func_name, value); return 0; } static PyObject * __Pyx_CyFunction_get_qualname(__pyx_CyFunctionObject *op, void *context) { CYTHON_UNUSED_VAR(context); Py_INCREF(op->func_qualname); return op->func_qualname; } static int __Pyx_CyFunction_set_qualname(__pyx_CyFunctionObject *op, PyObject *value, void *context) { CYTHON_UNUSED_VAR(context); #if PY_MAJOR_VERSION >= 3 if (unlikely(value == NULL || !PyUnicode_Check(value))) #else if (unlikely(value == NULL || !PyString_Check(value))) #endif { PyErr_SetString(PyExc_TypeError, "__qualname__ must be set to a string object"); return -1; } Py_INCREF(value); __Pyx_Py_XDECREF_SET(op->func_qualname, value); return 0; } static PyObject * __Pyx_CyFunction_get_dict(__pyx_CyFunctionObject *op, void *context) { CYTHON_UNUSED_VAR(context); if (unlikely(op->func_dict == NULL)) { op->func_dict = PyDict_New(); if (unlikely(op->func_dict == NULL)) return NULL; } Py_INCREF(op->func_dict); return op->func_dict; } static int __Pyx_CyFunction_set_dict(__pyx_CyFunctionObject *op, PyObject *value, void *context) { CYTHON_UNUSED_VAR(context); if (unlikely(value == NULL)) { PyErr_SetString(PyExc_TypeError, "function's dictionary may not be deleted"); return -1; } if (unlikely(!PyDict_Check(value))) { PyErr_SetString(PyExc_TypeError, "setting function's dictionary to a non-dict"); return -1; } Py_INCREF(value); __Pyx_Py_XDECREF_SET(op->func_dict, value); return 0; } static PyObject * __Pyx_CyFunction_get_globals(__pyx_CyFunctionObject *op, void *context) { CYTHON_UNUSED_VAR(context); Py_INCREF(op->func_globals); return op->func_globals; } static PyObject * __Pyx_CyFunction_get_closure(__pyx_CyFunctionObject *op, void *context) { CYTHON_UNUSED_VAR(op); CYTHON_UNUSED_VAR(context); Py_INCREF(Py_None); return Py_None; } static PyObject * __Pyx_CyFunction_get_code(__pyx_CyFunctionObject *op, void *context) { PyObject* result = (op->func_code) ? op->func_code : Py_None; CYTHON_UNUSED_VAR(context); Py_INCREF(result); return result; } static int __Pyx_CyFunction_init_defaults(__pyx_CyFunctionObject *op) { int result = 0; PyObject *res = op->defaults_getter((PyObject *) op); if (unlikely(!res)) return -1; #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS op->defaults_tuple = PyTuple_GET_ITEM(res, 0); Py_INCREF(op->defaults_tuple); op->defaults_kwdict = PyTuple_GET_ITEM(res, 1); Py_INCREF(op->defaults_kwdict); #else op->defaults_tuple = __Pyx_PySequence_ITEM(res, 0); if (unlikely(!op->defaults_tuple)) result = -1; else { op->defaults_kwdict = __Pyx_PySequence_ITEM(res, 1); if (unlikely(!op->defaults_kwdict)) result = -1; } #endif Py_DECREF(res); return result; } static int __Pyx_CyFunction_set_defaults(__pyx_CyFunctionObject *op, PyObject* value, void *context) { CYTHON_UNUSED_VAR(context); if (!value) { value = Py_None; } else if (unlikely(value != Py_None && !PyTuple_Check(value))) { PyErr_SetString(PyExc_TypeError, "__defaults__ must be set to a tuple object"); return -1; } PyErr_WarnEx(PyExc_RuntimeWarning, "changes to cyfunction.__defaults__ will not " "currently affect the values used in function calls", 1); Py_INCREF(value); __Pyx_Py_XDECREF_SET(op->defaults_tuple, value); return 0; } static PyObject * __Pyx_CyFunction_get_defaults(__pyx_CyFunctionObject *op, void *context) { PyObject* result = op->defaults_tuple; CYTHON_UNUSED_VAR(context); if (unlikely(!result)) { if (op->defaults_getter) { if (unlikely(__Pyx_CyFunction_init_defaults(op) < 0)) return NULL; result = op->defaults_tuple; } else { result = Py_None; } } Py_INCREF(result); return result; } static int __Pyx_CyFunction_set_kwdefaults(__pyx_CyFunctionObject *op, PyObject* value, void *context) { CYTHON_UNUSED_VAR(context); if (!value) { value = Py_None; } else if (unlikely(value != Py_None && !PyDict_Check(value))) { PyErr_SetString(PyExc_TypeError, "__kwdefaults__ must be set to a dict object"); return -1; } PyErr_WarnEx(PyExc_RuntimeWarning, "changes to cyfunction.__kwdefaults__ will not " "currently affect the values used in function calls", 1); Py_INCREF(value); __Pyx_Py_XDECREF_SET(op->defaults_kwdict, value); return 0; } static PyObject * __Pyx_CyFunction_get_kwdefaults(__pyx_CyFunctionObject *op, void *context) { PyObject* result = op->defaults_kwdict; CYTHON_UNUSED_VAR(context); if (unlikely(!result)) { if (op->defaults_getter) { if (unlikely(__Pyx_CyFunction_init_defaults(op) < 0)) return NULL; result = op->defaults_kwdict; } else { result = Py_None; } } Py_INCREF(result); return result; } static int __Pyx_CyFunction_set_annotations(__pyx_CyFunctionObject *op, PyObject* value, void *context) { CYTHON_UNUSED_VAR(context); if (!value || value == Py_None) { value = NULL; } else if (unlikely(!PyDict_Check(value))) { PyErr_SetString(PyExc_TypeError, "__annotations__ must be set to a dict object"); return -1; } Py_XINCREF(value); __Pyx_Py_XDECREF_SET(op->func_annotations, value); return 0; } static PyObject * __Pyx_CyFunction_get_annotations(__pyx_CyFunctionObject *op, void *context) { PyObject* result = op->func_annotations; CYTHON_UNUSED_VAR(context); if (unlikely(!result)) { result = PyDict_New(); if (unlikely(!result)) return NULL; op->func_annotations = result; } Py_INCREF(result); return result; } static PyObject * __Pyx_CyFunction_get_is_coroutine(__pyx_CyFunctionObject *op, void *context) { int is_coroutine; CYTHON_UNUSED_VAR(context); if (op->func_is_coroutine) { return __Pyx_NewRef(op->func_is_coroutine); } is_coroutine = op->flags & __Pyx_CYFUNCTION_COROUTINE; #if PY_VERSION_HEX >= 0x03050000 if (is_coroutine) { PyObject *module, *fromlist, *marker = __pyx_n_s_is_coroutine; fromlist = PyList_New(1); if (unlikely(!fromlist)) return NULL; Py_INCREF(marker); #if CYTHON_ASSUME_SAFE_MACROS PyList_SET_ITEM(fromlist, 0, marker); #else if (unlikely(PyList_SetItem(fromlist, 0, marker) < 0)) { Py_DECREF(marker); Py_DECREF(fromlist); return NULL; } #endif module = PyImport_ImportModuleLevelObject(__pyx_n_s_asyncio_coroutines, NULL, NULL, fromlist, 0); Py_DECREF(fromlist); if (unlikely(!module)) goto ignore; op->func_is_coroutine = __Pyx_PyObject_GetAttrStr(module, marker); Py_DECREF(module); if (likely(op->func_is_coroutine)) { return __Pyx_NewRef(op->func_is_coroutine); } ignore: PyErr_Clear(); } #endif op->func_is_coroutine = __Pyx_PyBool_FromLong(is_coroutine); return __Pyx_NewRef(op->func_is_coroutine); } #if CYTHON_COMPILING_IN_LIMITED_API static PyObject * __Pyx_CyFunction_get_module(__pyx_CyFunctionObject *op, void *context) { CYTHON_UNUSED_VAR(context); return PyObject_GetAttrString(op->func, "__module__"); } static int __Pyx_CyFunction_set_module(__pyx_CyFunctionObject *op, PyObject* value, void *context) { CYTHON_UNUSED_VAR(context); return PyObject_SetAttrString(op->func, "__module__", value); } #endif static PyGetSetDef __pyx_CyFunction_getsets[] = { {(char *) "func_doc", (getter)__Pyx_CyFunction_get_doc, (setter)__Pyx_CyFunction_set_doc, 0, 0}, {(char *) "__doc__", (getter)__Pyx_CyFunction_get_doc, (setter)__Pyx_CyFunction_set_doc, 0, 0}, {(char *) "func_name", (getter)__Pyx_CyFunction_get_name, (setter)__Pyx_CyFunction_set_name, 0, 0}, {(char *) "__name__", (getter)__Pyx_CyFunction_get_name, (setter)__Pyx_CyFunction_set_name, 0, 0}, {(char *) "__qualname__", (getter)__Pyx_CyFunction_get_qualname, (setter)__Pyx_CyFunction_set_qualname, 0, 0}, {(char *) "func_dict", (getter)__Pyx_CyFunction_get_dict, (setter)__Pyx_CyFunction_set_dict, 0, 0}, {(char *) "__dict__", (getter)__Pyx_CyFunction_get_dict, (setter)__Pyx_CyFunction_set_dict, 0, 0}, {(char *) "func_globals", (getter)__Pyx_CyFunction_get_globals, 0, 0, 0}, {(char *) "__globals__", (getter)__Pyx_CyFunction_get_globals, 0, 0, 0}, {(char *) "func_closure", (getter)__Pyx_CyFunction_get_closure, 0, 0, 0}, {(char *) "__closure__", (getter)__Pyx_CyFunction_get_closure, 0, 0, 0}, {(char *) "func_code", (getter)__Pyx_CyFunction_get_code, 0, 0, 0}, {(char *) "__code__", (getter)__Pyx_CyFunction_get_code, 0, 0, 0}, {(char *) "func_defaults", (getter)__Pyx_CyFunction_get_defaults, (setter)__Pyx_CyFunction_set_defaults, 0, 0}, {(char *) "__defaults__", (getter)__Pyx_CyFunction_get_defaults, (setter)__Pyx_CyFunction_set_defaults, 0, 0}, {(char *) "__kwdefaults__", (getter)__Pyx_CyFunction_get_kwdefaults, (setter)__Pyx_CyFunction_set_kwdefaults, 0, 0}, {(char *) "__annotations__", (getter)__Pyx_CyFunction_get_annotations, (setter)__Pyx_CyFunction_set_annotations, 0, 0}, {(char *) "_is_coroutine", (getter)__Pyx_CyFunction_get_is_coroutine, 0, 0, 0}, #if CYTHON_COMPILING_IN_LIMITED_API {"__module__", (getter)__Pyx_CyFunction_get_module, (setter)__Pyx_CyFunction_set_module, 0, 0}, #endif {0, 0, 0, 0, 0} }; static PyMemberDef __pyx_CyFunction_members[] = { #if !CYTHON_COMPILING_IN_LIMITED_API {(char *) "__module__", T_OBJECT, offsetof(PyCFunctionObject, m_module), 0, 0}, #endif #if CYTHON_USE_TYPE_SPECS {(char *) "__dictoffset__", T_PYSSIZET, offsetof(__pyx_CyFunctionObject, func_dict), READONLY, 0}, #if CYTHON_METH_FASTCALL #if CYTHON_BACKPORT_VECTORCALL {(char *) "__vectorcalloffset__", T_PYSSIZET, offsetof(__pyx_CyFunctionObject, func_vectorcall), READONLY, 0}, #else #if !CYTHON_COMPILING_IN_LIMITED_API {(char *) "__vectorcalloffset__", T_PYSSIZET, offsetof(PyCFunctionObject, vectorcall), READONLY, 0}, #endif #endif #endif #if PY_VERSION_HEX < 0x030500A0 || CYTHON_COMPILING_IN_LIMITED_API {(char *) "__weaklistoffset__", T_PYSSIZET, offsetof(__pyx_CyFunctionObject, func_weakreflist), READONLY, 0}, #else {(char *) "__weaklistoffset__", T_PYSSIZET, offsetof(PyCFunctionObject, m_weakreflist), READONLY, 0}, #endif #endif {0, 0, 0, 0, 0} }; static PyObject * __Pyx_CyFunction_reduce(__pyx_CyFunctionObject *m, PyObject *args) { CYTHON_UNUSED_VAR(args); #if PY_MAJOR_VERSION >= 3 Py_INCREF(m->func_qualname); return m->func_qualname; #else return PyString_FromString(((PyCFunctionObject*)m)->m_ml->ml_name); #endif } static PyMethodDef __pyx_CyFunction_methods[] = { {"__reduce__", (PyCFunction)__Pyx_CyFunction_reduce, METH_VARARGS, 0}, {0, 0, 0, 0} }; #if PY_VERSION_HEX < 0x030500A0 || CYTHON_COMPILING_IN_LIMITED_API #define __Pyx_CyFunction_weakreflist(cyfunc) ((cyfunc)->func_weakreflist) #else #define __Pyx_CyFunction_weakreflist(cyfunc) (((PyCFunctionObject*)cyfunc)->m_weakreflist) #endif static PyObject *__Pyx_CyFunction_Init(__pyx_CyFunctionObject *op, PyMethodDef *ml, int flags, PyObject* qualname, PyObject *closure, PyObject *module, PyObject* globals, PyObject* code) { #if !CYTHON_COMPILING_IN_LIMITED_API PyCFunctionObject *cf = (PyCFunctionObject*) op; #endif if (unlikely(op == NULL)) return NULL; #if CYTHON_COMPILING_IN_LIMITED_API op->func = PyCFunction_NewEx(ml, (PyObject*)op, module); if (unlikely(!op->func)) return NULL; #endif op->flags = flags; __Pyx_CyFunction_weakreflist(op) = NULL; #if !CYTHON_COMPILING_IN_LIMITED_API cf->m_ml = ml; cf->m_self = (PyObject *) op; #endif Py_XINCREF(closure); op->func_closure = closure; #if !CYTHON_COMPILING_IN_LIMITED_API Py_XINCREF(module); cf->m_module = module; #endif op->func_dict = NULL; op->func_name = NULL; Py_INCREF(qualname); op->func_qualname = qualname; op->func_doc = NULL; #if PY_VERSION_HEX < 0x030900B1 || CYTHON_COMPILING_IN_LIMITED_API op->func_classobj = NULL; #else ((PyCMethodObject*)op)->mm_class = NULL; #endif op->func_globals = globals; Py_INCREF(op->func_globals); Py_XINCREF(code); op->func_code = code; op->defaults_pyobjects = 0; op->defaults_size = 0; op->defaults = NULL; op->defaults_tuple = NULL; op->defaults_kwdict = NULL; op->defaults_getter = NULL; op->func_annotations = NULL; op->func_is_coroutine = NULL; #if CYTHON_METH_FASTCALL switch (ml->ml_flags & (METH_VARARGS | METH_FASTCALL | METH_NOARGS | METH_O | METH_KEYWORDS | METH_METHOD)) { case METH_NOARGS: __Pyx_CyFunction_func_vectorcall(op) = __Pyx_CyFunction_Vectorcall_NOARGS; break; case METH_O: __Pyx_CyFunction_func_vectorcall(op) = __Pyx_CyFunction_Vectorcall_O; break; case METH_METHOD | METH_FASTCALL | METH_KEYWORDS: __Pyx_CyFunction_func_vectorcall(op) = __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS_METHOD; break; case METH_FASTCALL | METH_KEYWORDS: __Pyx_CyFunction_func_vectorcall(op) = __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS; break; case METH_VARARGS | METH_KEYWORDS: __Pyx_CyFunction_func_vectorcall(op) = NULL; break; default: PyErr_SetString(PyExc_SystemError, "Bad call flags for CyFunction"); Py_DECREF(op); return NULL; } #endif return (PyObject *) op; } static int __Pyx_CyFunction_clear(__pyx_CyFunctionObject *m) { Py_CLEAR(m->func_closure); #if CYTHON_COMPILING_IN_LIMITED_API Py_CLEAR(m->func); #else Py_CLEAR(((PyCFunctionObject*)m)->m_module); #endif Py_CLEAR(m->func_dict); Py_CLEAR(m->func_name); Py_CLEAR(m->func_qualname); Py_CLEAR(m->func_doc); Py_CLEAR(m->func_globals); Py_CLEAR(m->func_code); #if !CYTHON_COMPILING_IN_LIMITED_API #if PY_VERSION_HEX < 0x030900B1 Py_CLEAR(__Pyx_CyFunction_GetClassObj(m)); #else { PyObject *cls = (PyObject*) ((PyCMethodObject *) (m))->mm_class; ((PyCMethodObject *) (m))->mm_class = NULL; Py_XDECREF(cls); } #endif #endif Py_CLEAR(m->defaults_tuple); Py_CLEAR(m->defaults_kwdict); Py_CLEAR(m->func_annotations); Py_CLEAR(m->func_is_coroutine); if (m->defaults) { PyObject **pydefaults = __Pyx_CyFunction_Defaults(PyObject *, m); int i; for (i = 0; i < m->defaults_pyobjects; i++) Py_XDECREF(pydefaults[i]); PyObject_Free(m->defaults); m->defaults = NULL; } return 0; } static void __Pyx__CyFunction_dealloc(__pyx_CyFunctionObject *m) { if (__Pyx_CyFunction_weakreflist(m) != NULL) PyObject_ClearWeakRefs((PyObject *) m); __Pyx_CyFunction_clear(m); __Pyx_PyHeapTypeObject_GC_Del(m); } static void __Pyx_CyFunction_dealloc(__pyx_CyFunctionObject *m) { PyObject_GC_UnTrack(m); __Pyx__CyFunction_dealloc(m); } static int __Pyx_CyFunction_traverse(__pyx_CyFunctionObject *m, visitproc visit, void *arg) { Py_VISIT(m->func_closure); #if CYTHON_COMPILING_IN_LIMITED_API Py_VISIT(m->func); #else Py_VISIT(((PyCFunctionObject*)m)->m_module); #endif Py_VISIT(m->func_dict); Py_VISIT(m->func_name); Py_VISIT(m->func_qualname); Py_VISIT(m->func_doc); Py_VISIT(m->func_globals); Py_VISIT(m->func_code); #if !CYTHON_COMPILING_IN_LIMITED_API Py_VISIT(__Pyx_CyFunction_GetClassObj(m)); #endif Py_VISIT(m->defaults_tuple); Py_VISIT(m->defaults_kwdict); Py_VISIT(m->func_is_coroutine); if (m->defaults) { PyObject **pydefaults = __Pyx_CyFunction_Defaults(PyObject *, m); int i; for (i = 0; i < m->defaults_pyobjects; i++) Py_VISIT(pydefaults[i]); } return 0; } static PyObject* __Pyx_CyFunction_repr(__pyx_CyFunctionObject *op) { #if PY_MAJOR_VERSION >= 3 return PyUnicode_FromFormat("<cyfunction %U at %p>", op->func_qualname, (void *)op); #else return PyString_FromFormat("<cyfunction %s at %p>", PyString_AsString(op->func_qualname), (void *)op); #endif } static PyObject * __Pyx_CyFunction_CallMethod(PyObject *func, PyObject *self, PyObject *arg, PyObject *kw) { #if CYTHON_COMPILING_IN_LIMITED_API PyObject *f = ((__pyx_CyFunctionObject*)func)->func; PyObject *py_name = NULL; PyCFunction meth; int flags; meth = PyCFunction_GetFunction(f); if (unlikely(!meth)) return NULL; flags = PyCFunction_GetFlags(f); if (unlikely(flags < 0)) return NULL; #else PyCFunctionObject* f = (PyCFunctionObject*)func; PyCFunction meth = f->m_ml->ml_meth; int flags = f->m_ml->ml_flags; #endif Py_ssize_t size; switch (flags & (METH_VARARGS | METH_KEYWORDS | METH_NOARGS | METH_O)) { case METH_VARARGS: if (likely(kw == NULL || PyDict_Size(kw) == 0)) return (*meth)(self, arg); break; case METH_VARARGS | METH_KEYWORDS: return (*(PyCFunctionWithKeywords)(void*)meth)(self, arg, kw); case METH_NOARGS: if (likely(kw == NULL || PyDict_Size(kw) == 0)) { #if CYTHON_ASSUME_SAFE_MACROS size = PyTuple_GET_SIZE(arg); #else size = PyTuple_Size(arg); if (unlikely(size < 0)) return NULL; #endif if (likely(size == 0)) return (*meth)(self, NULL); #if CYTHON_COMPILING_IN_LIMITED_API py_name = __Pyx_CyFunction_get_name((__pyx_CyFunctionObject*)func, NULL); if (!py_name) return NULL; PyErr_Format(PyExc_TypeError, "%.200S() takes no arguments (%" CYTHON_FORMAT_SSIZE_T "d given)", py_name, size); Py_DECREF(py_name); #else PyErr_Format(PyExc_TypeError, "%.200s() takes no arguments (%" CYTHON_FORMAT_SSIZE_T "d given)", f->m_ml->ml_name, size); #endif return NULL; } break; case METH_O: if (likely(kw == NULL || PyDict_Size(kw) == 0)) { #if CYTHON_ASSUME_SAFE_MACROS size = PyTuple_GET_SIZE(arg); #else size = PyTuple_Size(arg); if (unlikely(size < 0)) return NULL; #endif if (likely(size == 1)) { PyObject *result, *arg0; #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS arg0 = PyTuple_GET_ITEM(arg, 0); #else arg0 = __Pyx_PySequence_ITEM(arg, 0); if (unlikely(!arg0)) return NULL; #endif result = (*meth)(self, arg0); #if !(CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS) Py_DECREF(arg0); #endif return result; } #if CYTHON_COMPILING_IN_LIMITED_API py_name = __Pyx_CyFunction_get_name((__pyx_CyFunctionObject*)func, NULL); if (!py_name) return NULL; PyErr_Format(PyExc_TypeError, "%.200S() takes exactly one argument (%" CYTHON_FORMAT_SSIZE_T "d given)", py_name, size); Py_DECREF(py_name); #else PyErr_Format(PyExc_TypeError, "%.200s() takes exactly one argument (%" CYTHON_FORMAT_SSIZE_T "d given)", f->m_ml->ml_name, size); #endif return NULL; } break; default: PyErr_SetString(PyExc_SystemError, "Bad call flags for CyFunction"); return NULL; } #if CYTHON_COMPILING_IN_LIMITED_API py_name = __Pyx_CyFunction_get_name((__pyx_CyFunctionObject*)func, NULL); if (!py_name) return NULL; PyErr_Format(PyExc_TypeError, "%.200S() takes no keyword arguments", py_name); Py_DECREF(py_name); #else PyErr_Format(PyExc_TypeError, "%.200s() takes no keyword arguments", f->m_ml->ml_name); #endif return NULL; } static CYTHON_INLINE PyObject *__Pyx_CyFunction_Call(PyObject *func, PyObject *arg, PyObject *kw) { PyObject *self, *result; #if CYTHON_COMPILING_IN_LIMITED_API self = PyCFunction_GetSelf(((__pyx_CyFunctionObject*)func)->func); if (unlikely(!self) && PyErr_Occurred()) return NULL; #else self = ((PyCFunctionObject*)func)->m_self; #endif result = __Pyx_CyFunction_CallMethod(func, self, arg, kw); return result; } static PyObject *__Pyx_CyFunction_CallAsMethod(PyObject *func, PyObject *args, PyObject *kw) { PyObject *result; __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *) func; #if CYTHON_METH_FASTCALL __pyx_vectorcallfunc vc = __Pyx_CyFunction_func_vectorcall(cyfunc); if (vc) { #if CYTHON_ASSUME_SAFE_MACROS return __Pyx_PyVectorcall_FastCallDict(func, vc, &PyTuple_GET_ITEM(args, 0), (size_t)PyTuple_GET_SIZE(args), kw); #else (void) &__Pyx_PyVectorcall_FastCallDict; return PyVectorcall_Call(func, args, kw); #endif } #endif if ((cyfunc->flags & __Pyx_CYFUNCTION_CCLASS) && !(cyfunc->flags & __Pyx_CYFUNCTION_STATICMETHOD)) { Py_ssize_t argc; PyObject *new_args; PyObject *self; #if CYTHON_ASSUME_SAFE_MACROS argc = PyTuple_GET_SIZE(args); #else argc = PyTuple_Size(args); if (unlikely(!argc) < 0) return NULL; #endif new_args = PyTuple_GetSlice(args, 1, argc); if (unlikely(!new_args)) return NULL; self = PyTuple_GetItem(args, 0); if (unlikely(!self)) { Py_DECREF(new_args); #if PY_MAJOR_VERSION > 2 PyErr_Format(PyExc_TypeError, "unbound method %.200S() needs an argument", cyfunc->func_qualname); #else PyErr_SetString(PyExc_TypeError, "unbound method needs an argument"); #endif return NULL; } result = __Pyx_CyFunction_CallMethod(func, self, new_args, kw); Py_DECREF(new_args); } else { result = __Pyx_CyFunction_Call(func, args, kw); } return result; } #if CYTHON_METH_FASTCALL static CYTHON_INLINE int __Pyx_CyFunction_Vectorcall_CheckArgs(__pyx_CyFunctionObject *cyfunc, Py_ssize_t nargs, PyObject *kwnames) { int ret = 0; if ((cyfunc->flags & __Pyx_CYFUNCTION_CCLASS) && !(cyfunc->flags & __Pyx_CYFUNCTION_STATICMETHOD)) { if (unlikely(nargs < 1)) { PyErr_Format(PyExc_TypeError, "%.200s() needs an argument", ((PyCFunctionObject*)cyfunc)->m_ml->ml_name); return -1; } ret = 1; } if (unlikely(kwnames) && unlikely(PyTuple_GET_SIZE(kwnames))) { PyErr_Format(PyExc_TypeError, "%.200s() takes no keyword arguments", ((PyCFunctionObject*)cyfunc)->m_ml->ml_name); return -1; } return ret; } static PyObject * __Pyx_CyFunction_Vectorcall_NOARGS(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames) { __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *)func; PyMethodDef* def = ((PyCFunctionObject*)cyfunc)->m_ml; #if CYTHON_BACKPORT_VECTORCALL Py_ssize_t nargs = (Py_ssize_t)nargsf; #else Py_ssize_t nargs = PyVectorcall_NARGS(nargsf); #endif PyObject *self; switch (__Pyx_CyFunction_Vectorcall_CheckArgs(cyfunc, nargs, kwnames)) { case 1: self = args[0]; args += 1; nargs -= 1; break; case 0: self = ((PyCFunctionObject*)cyfunc)->m_self; break; default: return NULL; } if (unlikely(nargs != 0)) { PyErr_Format(PyExc_TypeError, "%.200s() takes no arguments (%" CYTHON_FORMAT_SSIZE_T "d given)", def->ml_name, nargs); return NULL; } return def->ml_meth(self, NULL); } static PyObject * __Pyx_CyFunction_Vectorcall_O(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames) { __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *)func; PyMethodDef* def = ((PyCFunctionObject*)cyfunc)->m_ml; #if CYTHON_BACKPORT_VECTORCALL Py_ssize_t nargs = (Py_ssize_t)nargsf; #else Py_ssize_t nargs = PyVectorcall_NARGS(nargsf); #endif PyObject *self; switch (__Pyx_CyFunction_Vectorcall_CheckArgs(cyfunc, nargs, kwnames)) { case 1: self = args[0]; args += 1; nargs -= 1; break; case 0: self = ((PyCFunctionObject*)cyfunc)->m_self; break; default: return NULL; } if (unlikely(nargs != 1)) { PyErr_Format(PyExc_TypeError, "%.200s() takes exactly one argument (%" CYTHON_FORMAT_SSIZE_T "d given)", def->ml_name, nargs); return NULL; } return def->ml_meth(self, args[0]); } static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames) { __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *)func; PyMethodDef* def = ((PyCFunctionObject*)cyfunc)->m_ml; #if CYTHON_BACKPORT_VECTORCALL Py_ssize_t nargs = (Py_ssize_t)nargsf; #else Py_ssize_t nargs = PyVectorcall_NARGS(nargsf); #endif PyObject *self; switch (__Pyx_CyFunction_Vectorcall_CheckArgs(cyfunc, nargs, NULL)) { case 1: self = args[0]; args += 1; nargs -= 1; break; case 0: self = ((PyCFunctionObject*)cyfunc)->m_self; break; default: return NULL; } return ((__Pyx_PyCFunctionFastWithKeywords)(void(*)(void))def->ml_meth)(self, args, nargs, kwnames); } static PyObject * __Pyx_CyFunction_Vectorcall_FASTCALL_KEYWORDS_METHOD(PyObject *func, PyObject *const *args, size_t nargsf, PyObject *kwnames) { __pyx_CyFunctionObject *cyfunc = (__pyx_CyFunctionObject *)func; PyMethodDef* def = ((PyCFunctionObject*)cyfunc)->m_ml; PyTypeObject *cls = (PyTypeObject *) __Pyx_CyFunction_GetClassObj(cyfunc); #if CYTHON_BACKPORT_VECTORCALL Py_ssize_t nargs = (Py_ssize_t)nargsf; #else Py_ssize_t nargs = PyVectorcall_NARGS(nargsf); #endif PyObject *self; switch (__Pyx_CyFunction_Vectorcall_CheckArgs(cyfunc, nargs, NULL)) { case 1: self = args[0]; args += 1; nargs -= 1; break; case 0: self = ((PyCFunctionObject*)cyfunc)->m_self; break; default: return NULL; } return ((__Pyx_PyCMethod)(void(*)(void))def->ml_meth)(self, cls, args, (size_t)nargs, kwnames); } #endif #if CYTHON_USE_TYPE_SPECS static PyType_Slot __pyx_CyFunctionType_slots[] = { {Py_tp_dealloc, (void *)__Pyx_CyFunction_dealloc}, {Py_tp_repr, (void *)__Pyx_CyFunction_repr}, {Py_tp_call, (void *)__Pyx_CyFunction_CallAsMethod}, {Py_tp_traverse, (void *)__Pyx_CyFunction_traverse}, {Py_tp_clear, (void *)__Pyx_CyFunction_clear}, {Py_tp_methods, (void *)__pyx_CyFunction_methods}, {Py_tp_members, (void *)__pyx_CyFunction_members}, {Py_tp_getset, (void *)__pyx_CyFunction_getsets}, {Py_tp_descr_get, (void *)__Pyx_PyMethod_New}, {0, 0}, }; static PyType_Spec __pyx_CyFunctionType_spec = { __PYX_TYPE_MODULE_PREFIX "cython_function_or_method", sizeof(__pyx_CyFunctionObject), 0, #ifdef Py_TPFLAGS_METHOD_DESCRIPTOR Py_TPFLAGS_METHOD_DESCRIPTOR | #endif #if (defined(_Py_TPFLAGS_HAVE_VECTORCALL) && CYTHON_METH_FASTCALL) _Py_TPFLAGS_HAVE_VECTORCALL | #endif Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC | Py_TPFLAGS_BASETYPE, __pyx_CyFunctionType_slots }; #else static PyTypeObject __pyx_CyFunctionType_type = { PyVarObject_HEAD_INIT(0, 0) __PYX_TYPE_MODULE_PREFIX "cython_function_or_method", sizeof(__pyx_CyFunctionObject), 0, (destructor) __Pyx_CyFunction_dealloc, #if !CYTHON_METH_FASTCALL 0, #elif CYTHON_BACKPORT_VECTORCALL (printfunc)offsetof(__pyx_CyFunctionObject, func_vectorcall), #else offsetof(PyCFunctionObject, vectorcall), #endif 0, 0, #if PY_MAJOR_VERSION < 3 0, #else 0, #endif (reprfunc) __Pyx_CyFunction_repr, 0, 0, 0, 0, __Pyx_CyFunction_CallAsMethod, 0, 0, 0, 0, #ifdef Py_TPFLAGS_METHOD_DESCRIPTOR Py_TPFLAGS_METHOD_DESCRIPTOR | #endif #if defined(_Py_TPFLAGS_HAVE_VECTORCALL) && CYTHON_METH_FASTCALL _Py_TPFLAGS_HAVE_VECTORCALL | #endif Py_TPFLAGS_DEFAULT | Py_TPFLAGS_HAVE_GC | Py_TPFLAGS_BASETYPE, 0, (traverseproc) __Pyx_CyFunction_traverse, (inquiry) __Pyx_CyFunction_clear, 0, #if PY_VERSION_HEX < 0x030500A0 offsetof(__pyx_CyFunctionObject, func_weakreflist), #else offsetof(PyCFunctionObject, m_weakreflist), #endif 0, 0, __pyx_CyFunction_methods, __pyx_CyFunction_members, __pyx_CyFunction_getsets, 0, 0, __Pyx_PyMethod_New, 0, offsetof(__pyx_CyFunctionObject, func_dict), 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, #if PY_VERSION_HEX >= 0x030400a1 0, #endif #if PY_VERSION_HEX >= 0x030800b1 && (!CYTHON_COMPILING_IN_PYPY || PYPY_VERSION_NUM >= 0x07030800) 0, #endif #if __PYX_NEED_TP_PRINT_SLOT 0, #endif #if PY_VERSION_HEX >= 0x030C0000 0, #endif #if PY_VERSION_HEX >= 0x030d00A4 0, #endif #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX >= 0x03090000 && PY_VERSION_HEX < 0x030a0000 0, #endif }; #endif static int __pyx_CyFunction_init(PyObject *module) { #if CYTHON_USE_TYPE_SPECS __pyx_CyFunctionType = __Pyx_FetchCommonTypeFromSpec(module, &__pyx_CyFunctionType_spec, NULL); #else CYTHON_UNUSED_VAR(module); __pyx_CyFunctionType = __Pyx_FetchCommonType(&__pyx_CyFunctionType_type); #endif if (unlikely(__pyx_CyFunctionType == NULL)) { return -1; } return 0; } static CYTHON_INLINE void *__Pyx_CyFunction_InitDefaults(PyObject *func, size_t size, int pyobjects) { __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func; m->defaults = PyObject_Malloc(size); if (unlikely(!m->defaults)) return PyErr_NoMemory(); memset(m->defaults, 0, size); m->defaults_pyobjects = pyobjects; m->defaults_size = size; return m->defaults; } static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsTuple(PyObject *func, PyObject *tuple) { __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func; m->defaults_tuple = tuple; Py_INCREF(tuple); } static CYTHON_INLINE void __Pyx_CyFunction_SetDefaultsKwDict(PyObject *func, PyObject *dict) { __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func; m->defaults_kwdict = dict; Py_INCREF(dict); } static CYTHON_INLINE void __Pyx_CyFunction_SetAnnotationsDict(PyObject *func, PyObject *dict) { __pyx_CyFunctionObject *m = (__pyx_CyFunctionObject *) func; m->func_annotations = dict; Py_INCREF(dict); } /* CythonFunction */ static PyObject *__Pyx_CyFunction_New(PyMethodDef *ml, int flags, PyObject* qualname, PyObject *closure, PyObject *module, PyObject* globals, PyObject* code) { PyObject *op = __Pyx_CyFunction_Init( PyObject_GC_New(__pyx_CyFunctionObject, __pyx_CyFunctionType), ml, flags, qualname, closure, module, globals, code ); if (likely(op)) { PyObject_GC_Track(op); } return op; } /* CalculateMetaclass */ static PyObject *__Pyx_CalculateMetaclass(PyTypeObject *metaclass, PyObject *bases) { Py_ssize_t i, nbases; #if CYTHON_ASSUME_SAFE_MACROS nbases = PyTuple_GET_SIZE(bases); #else nbases = PyTuple_Size(bases); if (nbases < 0) return NULL; #endif for (i=0; i < nbases; i++) { PyTypeObject *tmptype; #if CYTHON_ASSUME_SAFE_MACROS PyObject *tmp = PyTuple_GET_ITEM(bases, i); #else PyObject *tmp = PyTuple_GetItem(bases, i); if (!tmp) return NULL; #endif tmptype = Py_TYPE(tmp); #if PY_MAJOR_VERSION < 3 if (tmptype == &PyClass_Type) continue; #endif if (!metaclass) { metaclass = tmptype; continue; } if (PyType_IsSubtype(metaclass, tmptype)) continue; if (PyType_IsSubtype(tmptype, metaclass)) { metaclass = tmptype; continue; } PyErr_SetString(PyExc_TypeError, "metaclass conflict: " "the metaclass of a derived class " "must be a (non-strict) subclass " "of the metaclasses of all its bases"); return NULL; } if (!metaclass) { #if PY_MAJOR_VERSION < 3 metaclass = &PyClass_Type; #else metaclass = &PyType_Type; #endif } Py_INCREF((PyObject*) metaclass); return (PyObject*) metaclass; } /* PyObjectCall2Args */ static CYTHON_INLINE PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2) { PyObject *args[3] = {NULL, arg1, arg2}; return __Pyx_PyObject_FastCall(function, args+1, 2 | __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET); } /* PyObjectLookupSpecial */ #if CYTHON_USE_PYTYPE_LOOKUP && CYTHON_USE_TYPE_SLOTS static CYTHON_INLINE PyObject* __Pyx__PyObject_LookupSpecial(PyObject* obj, PyObject* attr_name, int with_error) { PyObject *res; PyTypeObject *tp = Py_TYPE(obj); #if PY_MAJOR_VERSION < 3 if (unlikely(PyInstance_Check(obj))) return with_error ? __Pyx_PyObject_GetAttrStr(obj, attr_name) : __Pyx_PyObject_GetAttrStrNoError(obj, attr_name); #endif res = _PyType_Lookup(tp, attr_name); if (likely(res)) { descrgetfunc f = Py_TYPE(res)->tp_descr_get; if (!f) { Py_INCREF(res); } else { res = f(res, obj, (PyObject *)tp); } } else if (with_error) { PyErr_SetObject(PyExc_AttributeError, attr_name); } return res; } #endif /* Py3ClassCreate */ static PyObject *__Pyx_Py3MetaclassPrepare(PyObject *metaclass, PyObject *bases, PyObject *name, PyObject *qualname, PyObject *mkw, PyObject *modname, PyObject *doc) { PyObject *ns; if (metaclass) { PyObject *prep = __Pyx_PyObject_GetAttrStrNoError(metaclass, __pyx_n_s_prepare); if (prep) { PyObject *pargs[3] = {NULL, name, bases}; ns = __Pyx_PyObject_FastCallDict(prep, pargs+1, 2 | __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET, mkw); Py_DECREF(prep); } else { if (unlikely(PyErr_Occurred())) return NULL; ns = PyDict_New(); } } else { ns = PyDict_New(); } if (unlikely(!ns)) return NULL; if (unlikely(PyObject_SetItem(ns, __pyx_n_s_module, modname) < 0)) goto bad; #if PY_VERSION_HEX >= 0x03030000 if (unlikely(PyObject_SetItem(ns, __pyx_n_s_qualname, qualname) < 0)) goto bad; #else CYTHON_MAYBE_UNUSED_VAR(qualname); #endif if (unlikely(doc && PyObject_SetItem(ns, __pyx_n_s_doc, doc) < 0)) goto bad; return ns; bad: Py_DECREF(ns); return NULL; } #if PY_VERSION_HEX < 0x030600A4 && CYTHON_PEP487_INIT_SUBCLASS static int __Pyx_SetNamesPEP487(PyObject *type_obj) { PyTypeObject *type = (PyTypeObject*) type_obj; PyObject *names_to_set, *key, *value, *set_name, *tmp; Py_ssize_t i = 0; #if CYTHON_USE_TYPE_SLOTS names_to_set = PyDict_Copy(type->tp_dict); #else { PyObject *d = PyObject_GetAttr(type_obj, __pyx_n_s_dict); names_to_set = NULL; if (likely(d)) { PyObject *names_to_set = PyDict_New(); int ret = likely(names_to_set) ? PyDict_Update(names_to_set, d) : -1; Py_DECREF(d); if (unlikely(ret < 0)) Py_CLEAR(names_to_set); } } #endif if (unlikely(names_to_set == NULL)) goto bad; while (PyDict_Next(names_to_set, &i, &key, &value)) { set_name = __Pyx_PyObject_LookupSpecialNoError(value, __pyx_n_s_set_name); if (unlikely(set_name != NULL)) { tmp = __Pyx_PyObject_Call2Args(set_name, type_obj, key); Py_DECREF(set_name); if (unlikely(tmp == NULL)) { __Pyx_TypeName value_type_name = __Pyx_PyType_GetName(Py_TYPE(value)); __Pyx_TypeName type_name = __Pyx_PyType_GetName(type); PyErr_Format(PyExc_RuntimeError, #if PY_MAJOR_VERSION >= 3 "Error calling __set_name__ on '" __Pyx_FMT_TYPENAME "' instance %R " "in '" __Pyx_FMT_TYPENAME "'", value_type_name, key, type_name); #else "Error calling __set_name__ on '" __Pyx_FMT_TYPENAME "' instance %.100s in '" __Pyx_FMT_TYPENAME "'", value_type_name, PyString_Check(key) ? PyString_AS_STRING(key) : "?", type_name); #endif goto bad; } else { Py_DECREF(tmp); } } else if (unlikely(PyErr_Occurred())) { goto bad; } } Py_DECREF(names_to_set); return 0; bad: Py_XDECREF(names_to_set); return -1; } static PyObject *__Pyx_InitSubclassPEP487(PyObject *type_obj, PyObject *mkw) { #if CYTHON_USE_TYPE_SLOTS && CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS PyTypeObject *type = (PyTypeObject*) type_obj; PyObject *mro = type->tp_mro; Py_ssize_t i, nbases; if (unlikely(!mro)) goto done; (void) &__Pyx_GetBuiltinName; Py_INCREF(mro); nbases = PyTuple_GET_SIZE(mro); assert(PyTuple_GET_ITEM(mro, 0) == type_obj); for (i = 1; i < nbases-1; i++) { PyObject *base, *dict, *meth; base = PyTuple_GET_ITEM(mro, i); dict = ((PyTypeObject *)base)->tp_dict; meth = __Pyx_PyDict_GetItemStrWithError(dict, __pyx_n_s_init_subclass); if (unlikely(meth)) { descrgetfunc f = Py_TYPE(meth)->tp_descr_get; PyObject *res; Py_INCREF(meth); if (likely(f)) { res = f(meth, NULL, type_obj); Py_DECREF(meth); if (unlikely(!res)) goto bad; meth = res; } res = __Pyx_PyObject_FastCallDict(meth, NULL, 0, mkw); Py_DECREF(meth); if (unlikely(!res)) goto bad; Py_DECREF(res); goto done; } else if (unlikely(PyErr_Occurred())) { goto bad; } } done: Py_XDECREF(mro); return type_obj; bad: Py_XDECREF(mro); Py_DECREF(type_obj); return NULL; #else PyObject *super_type, *super, *func, *res; #if CYTHON_COMPILING_IN_PYPY && !defined(PySuper_Type) super_type = __Pyx_GetBuiltinName(__pyx_n_s_super); #else super_type = (PyObject*) &PySuper_Type; (void) &__Pyx_GetBuiltinName; #endif super = likely(super_type) ? __Pyx_PyObject_Call2Args(super_type, type_obj, type_obj) : NULL; #if CYTHON_COMPILING_IN_PYPY && !defined(PySuper_Type) Py_XDECREF(super_type); #endif if (unlikely(!super)) { Py_CLEAR(type_obj); goto done; } func = __Pyx_PyObject_GetAttrStrNoError(super, __pyx_n_s_init_subclass); Py_DECREF(super); if (likely(!func)) { if (unlikely(PyErr_Occurred())) Py_CLEAR(type_obj); goto done; } res = __Pyx_PyObject_FastCallDict(func, NULL, 0, mkw); Py_DECREF(func); if (unlikely(!res)) Py_CLEAR(type_obj); Py_XDECREF(res); done: return type_obj; #endif } #endif static PyObject *__Pyx_Py3ClassCreate(PyObject *metaclass, PyObject *name, PyObject *bases, PyObject *dict, PyObject *mkw, int calculate_metaclass, int allow_py2_metaclass) { PyObject *result; PyObject *owned_metaclass = NULL; PyObject *margs[4] = {NULL, name, bases, dict}; if (allow_py2_metaclass) { owned_metaclass = PyObject_GetItem(dict, __pyx_n_s_metaclass); if (owned_metaclass) { metaclass = owned_metaclass; } else if (likely(PyErr_ExceptionMatches(PyExc_KeyError))) { PyErr_Clear(); } else { return NULL; } } if (calculate_metaclass && (!metaclass || PyType_Check(metaclass))) { metaclass = __Pyx_CalculateMetaclass((PyTypeObject*) metaclass, bases); Py_XDECREF(owned_metaclass); if (unlikely(!metaclass)) return NULL; owned_metaclass = metaclass; } result = __Pyx_PyObject_FastCallDict(metaclass, margs+1, 3 | __Pyx_PY_VECTORCALL_ARGUMENTS_OFFSET, #if PY_VERSION_HEX < 0x030600A4 (metaclass == (PyObject*)&PyType_Type) ? NULL : mkw #else mkw #endif ); Py_XDECREF(owned_metaclass); #if PY_VERSION_HEX < 0x030600A4 && CYTHON_PEP487_INIT_SUBCLASS if (likely(result) && likely(PyType_Check(result))) { if (unlikely(__Pyx_SetNamesPEP487(result) < 0)) { Py_CLEAR(result); } else { result = __Pyx_InitSubclassPEP487(result, mkw); } } #else (void) &__Pyx_GetBuiltinName; #endif return result; } /* CLineInTraceback */ #ifndef CYTHON_CLINE_IN_TRACEBACK static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line) { PyObject *use_cline; PyObject *ptype, *pvalue, *ptraceback; #if CYTHON_COMPILING_IN_CPYTHON PyObject **cython_runtime_dict; #endif CYTHON_MAYBE_UNUSED_VAR(tstate); if (unlikely(!__pyx_cython_runtime)) { return c_line; } __Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback); #if CYTHON_COMPILING_IN_CPYTHON cython_runtime_dict = _PyObject_GetDictPtr(__pyx_cython_runtime); if (likely(cython_runtime_dict)) { __PYX_PY_DICT_LOOKUP_IF_MODIFIED( use_cline, *cython_runtime_dict, __Pyx_PyDict_GetItemStr(*cython_runtime_dict, __pyx_n_s_cline_in_traceback)) } else #endif { PyObject *use_cline_obj = __Pyx_PyObject_GetAttrStrNoError(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback); if (use_cline_obj) { use_cline = PyObject_Not(use_cline_obj) ? Py_False : Py_True; Py_DECREF(use_cline_obj); } else { PyErr_Clear(); use_cline = NULL; } } if (!use_cline) { c_line = 0; (void) PyObject_SetAttr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback, Py_False); } else if (use_cline == Py_False || (use_cline != Py_True && PyObject_Not(use_cline) != 0)) { c_line = 0; } __Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback); return c_line; } #endif /* CodeObjectCache */ #if !CYTHON_COMPILING_IN_LIMITED_API static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { int start = 0, mid = 0, end = count - 1; if (end >= 0 && code_line > entries[end].code_line) { return count; } while (start < end) { mid = start + (end - start) / 2; if (code_line < entries[mid].code_line) { end = mid; } else if (code_line > entries[mid].code_line) { start = mid + 1; } else { return mid; } } if (code_line <= entries[mid].code_line) { return mid; } else { return mid + 1; } } static PyCodeObject *__pyx_find_code_object(int code_line) { PyCodeObject* code_object; int pos; if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) { return NULL; } pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) { return NULL; } code_object = __pyx_code_cache.entries[pos].code_object; Py_INCREF(code_object); return code_object; } static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { int pos, i; __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries; if (unlikely(!code_line)) { return; } if (unlikely(!entries)) { entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry)); if (likely(entries)) { __pyx_code_cache.entries = entries; __pyx_code_cache.max_count = 64; __pyx_code_cache.count = 1; entries[0].code_line = code_line; entries[0].code_object = code_object; Py_INCREF(code_object); } return; } pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) { PyCodeObject* tmp = entries[pos].code_object; entries[pos].code_object = code_object; Py_DECREF(tmp); return; } if (__pyx_code_cache.count == __pyx_code_cache.max_count) { int new_max = __pyx_code_cache.max_count + 64; entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc( __pyx_code_cache.entries, ((size_t)new_max) * sizeof(__Pyx_CodeObjectCacheEntry)); if (unlikely(!entries)) { return; } __pyx_code_cache.entries = entries; __pyx_code_cache.max_count = new_max; } for (i=__pyx_code_cache.count; i>pos; i--) { entries[i] = entries[i-1]; } entries[pos].code_line = code_line; entries[pos].code_object = code_object; __pyx_code_cache.count++; Py_INCREF(code_object); } #endif /* AddTraceback */ #include "compile.h" #include "frameobject.h" #include "traceback.h" #if PY_VERSION_HEX >= 0x030b00a6 && !CYTHON_COMPILING_IN_LIMITED_API #ifndef Py_BUILD_CORE #define Py_BUILD_CORE 1 #endif #include "internal/pycore_frame.h" #endif #if CYTHON_COMPILING_IN_LIMITED_API static PyObject *__Pyx_PyCode_Replace_For_AddTraceback(PyObject *code, PyObject *scratch_dict, PyObject *firstlineno, PyObject *name) { PyObject *replace = NULL; if (unlikely(PyDict_SetItemString(scratch_dict, "co_firstlineno", firstlineno))) return NULL; if (unlikely(PyDict_SetItemString(scratch_dict, "co_name", name))) return NULL; replace = PyObject_GetAttrString(code, "replace"); if (likely(replace)) { PyObject *result; result = PyObject_Call(replace, __pyx_empty_tuple, scratch_dict); Py_DECREF(replace); return result; } PyErr_Clear(); #if __PYX_LIMITED_VERSION_HEX < 0x030780000 { PyObject *compiled = NULL, *result = NULL; if (unlikely(PyDict_SetItemString(scratch_dict, "code", code))) return NULL; if (unlikely(PyDict_SetItemString(scratch_dict, "type", (PyObject*)(&PyType_Type)))) return NULL; compiled = Py_CompileString( "out = type(code)(\n" " code.co_argcount, code.co_kwonlyargcount, code.co_nlocals, code.co_stacksize,\n" " code.co_flags, code.co_code, code.co_consts, code.co_names,\n" " code.co_varnames, code.co_filename, co_name, co_firstlineno,\n" " code.co_lnotab)\n", "<dummy>", Py_file_input); if (!compiled) return NULL; result = PyEval_EvalCode(compiled, scratch_dict, scratch_dict); Py_DECREF(compiled); if (!result) PyErr_Print(); Py_DECREF(result); result = PyDict_GetItemString(scratch_dict, "out"); if (result) Py_INCREF(result); return result; } #else return NULL; #endif } static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename) { PyObject *code_object = NULL, *py_py_line = NULL, *py_funcname = NULL, *dict = NULL; PyObject *replace = NULL, *getframe = NULL, *frame = NULL; PyObject *exc_type, *exc_value, *exc_traceback; int success = 0; if (c_line) { (void) __pyx_cfilenm; (void) __Pyx_CLineForTraceback(__Pyx_PyThreadState_Current, c_line); } PyErr_Fetch(&exc_type, &exc_value, &exc_traceback); code_object = Py_CompileString("_getframe()", filename, Py_eval_input); if (unlikely(!code_object)) goto bad; py_py_line = PyLong_FromLong(py_line); if (unlikely(!py_py_line)) goto bad; py_funcname = PyUnicode_FromString(funcname); if (unlikely(!py_funcname)) goto bad; dict = PyDict_New(); if (unlikely(!dict)) goto bad; { PyObject *old_code_object = code_object; code_object = __Pyx_PyCode_Replace_For_AddTraceback(code_object, dict, py_py_line, py_funcname); Py_DECREF(old_code_object); } if (unlikely(!code_object)) goto bad; getframe = PySys_GetObject("_getframe"); if (unlikely(!getframe)) goto bad; if (unlikely(PyDict_SetItemString(dict, "_getframe", getframe))) goto bad; frame = PyEval_EvalCode(code_object, dict, dict); if (unlikely(!frame) || frame == Py_None) goto bad; success = 1; bad: PyErr_Restore(exc_type, exc_value, exc_traceback); Py_XDECREF(code_object); Py_XDECREF(py_py_line); Py_XDECREF(py_funcname); Py_XDECREF(dict); Py_XDECREF(replace); if (success) { PyTraceBack_Here( (struct _frame*)frame); } Py_XDECREF(frame); } #else static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = NULL; PyObject *py_funcname = NULL; #if PY_MAJOR_VERSION < 3 PyObject *py_srcfile = NULL; py_srcfile = PyString_FromString(filename); if (!py_srcfile) goto bad; #endif if (c_line) { #if PY_MAJOR_VERSION < 3 py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); if (!py_funcname) goto bad; #else py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); if (!py_funcname) goto bad; funcname = PyUnicode_AsUTF8(py_funcname); if (!funcname) goto bad; #endif } else { #if PY_MAJOR_VERSION < 3 py_funcname = PyString_FromString(funcname); if (!py_funcname) goto bad; #endif } #if PY_MAJOR_VERSION < 3 py_code = __Pyx_PyCode_New( 0, 0, 0, 0, 0, 0, __pyx_empty_bytes, /*PyObject *code,*/ __pyx_empty_tuple, /*PyObject *consts,*/ __pyx_empty_tuple, /*PyObject *names,*/ __pyx_empty_tuple, /*PyObject *varnames,*/ __pyx_empty_tuple, /*PyObject *freevars,*/ __pyx_empty_tuple, /*PyObject *cellvars,*/ py_srcfile, /*PyObject *filename,*/ py_funcname, /*PyObject *name,*/ py_line, __pyx_empty_bytes /*PyObject *lnotab*/ ); Py_DECREF(py_srcfile); #else py_code = PyCode_NewEmpty(filename, funcname, py_line); #endif Py_XDECREF(py_funcname); return py_code; bad: Py_XDECREF(py_funcname); #if PY_MAJOR_VERSION < 3 Py_XDECREF(py_srcfile); #endif return NULL; } static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = 0; PyFrameObject *py_frame = 0; PyThreadState *tstate = __Pyx_PyThreadState_Current; PyObject *ptype, *pvalue, *ptraceback; if (c_line) { c_line = __Pyx_CLineForTraceback(tstate, c_line); } py_code = __pyx_find_code_object(c_line ? -c_line : py_line); if (!py_code) { __Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback); py_code = __Pyx_CreateCodeObjectForTraceback( funcname, c_line, py_line, filename); if (!py_code) { /* If the code object creation fails, then we should clear the fetched exception references and propagate the new exception */ Py_XDECREF(ptype); Py_XDECREF(pvalue); Py_XDECREF(ptraceback); goto bad; } __Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback); __pyx_insert_code_object(c_line ? -c_line : py_line, py_code); } py_frame = PyFrame_New( tstate, /*PyThreadState *tstate,*/ py_code, /*PyCodeObject *code,*/ __pyx_d, /*PyObject *globals,*/ 0 /*PyObject *locals*/ ); if (!py_frame) goto bad; __Pyx_PyFrame_SetLineNumber(py_frame, py_line); PyTraceBack_Here(py_frame); bad: Py_XDECREF(py_code); Py_XDECREF(py_frame); } #endif /* CIntFromPyVerify */ #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0) #define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1) #define __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, exc)\ {\ func_type value = func_value;\ if (sizeof(target_type) < sizeof(func_type)) {\ if (unlikely(value != (func_type) (target_type) value)) {\ func_type zero = 0;\ if (exc && unlikely(value == (func_type)-1 && PyErr_Occurred()))\ return (target_type) -1;\ if (is_unsigned && unlikely(value < zero))\ goto raise_neg_overflow;\ else\ goto raise_overflow;\ }\ }\ return (target_type) value;\ } /* CIntFromPy */ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic push #pragma GCC diagnostic ignored "-Wconversion" #endif const int neg_one = (int) -1, const_zero = (int) 0; #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic pop #endif const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if ((sizeof(int) < sizeof(long))) { __PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (int) val; } } #endif if (unlikely(!PyLong_Check(x))) { int val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (int) -1; val = __Pyx_PyInt_As_int(tmp); Py_DECREF(tmp); return val; } if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS if (unlikely(__Pyx_PyLong_IsNeg(x))) { goto raise_neg_overflow; } else if (__Pyx_PyLong_IsCompact(x)) { __PYX_VERIFY_RETURN_INT(int, __Pyx_compact_upylong, __Pyx_PyLong_CompactValueUnsigned(x)) } else { const digit* digits = __Pyx_PyLong_Digits(x); assert(__Pyx_PyLong_DigitCount(x) > 1); switch (__Pyx_PyLong_DigitCount(x)) { case 2: if ((8 * sizeof(int) > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int) >= 2 * PyLong_SHIFT)) { return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 3: if ((8 * sizeof(int) > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int) >= 3 * PyLong_SHIFT)) { return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 4: if ((8 * sizeof(int) > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int) >= 4 * PyLong_SHIFT)) { return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; } } #endif #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030C00A7 if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (int) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if ((sizeof(int) <= sizeof(unsigned long))) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) #ifdef HAVE_LONG_LONG } else if ((sizeof(int) <= sizeof(unsigned PY_LONG_LONG))) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) #endif } } else { #if CYTHON_USE_PYLONG_INTERNALS if (__Pyx_PyLong_IsCompact(x)) { __PYX_VERIFY_RETURN_INT(int, __Pyx_compact_pylong, __Pyx_PyLong_CompactValue(x)) } else { const digit* digits = __Pyx_PyLong_Digits(x); assert(__Pyx_PyLong_DigitCount(x) > 1); switch (__Pyx_PyLong_SignedDigitCount(x)) { case -2: if ((8 * sizeof(int) - 1 > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int) - 1 > 2 * PyLong_SHIFT)) { return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 2: if ((8 * sizeof(int) > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int) - 1 > 2 * PyLong_SHIFT)) { return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -3: if ((8 * sizeof(int) - 1 > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int) - 1 > 3 * PyLong_SHIFT)) { return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 3: if ((8 * sizeof(int) > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int) - 1 > 3 * PyLong_SHIFT)) { return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -4: if ((8 * sizeof(int) - 1 > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int) - 1 > 4 * PyLong_SHIFT)) { return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 4: if ((8 * sizeof(int) > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int) - 1 > 4 * PyLong_SHIFT)) { return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; } } #endif if ((sizeof(int) <= sizeof(long))) { __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) #ifdef HAVE_LONG_LONG } else if ((sizeof(int) <= sizeof(PY_LONG_LONG))) { __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) #endif } } { int val; int ret = -1; #if PY_VERSION_HEX >= 0x030d00A6 && !CYTHON_COMPILING_IN_LIMITED_API Py_ssize_t bytes_copied = PyLong_AsNativeBytes( x, &val, sizeof(val), Py_ASNATIVEBYTES_NATIVE_ENDIAN | (is_unsigned ? Py_ASNATIVEBYTES_UNSIGNED_BUFFER | Py_ASNATIVEBYTES_REJECT_NEGATIVE : 0)); if (unlikely(bytes_copied == -1)) { } else if (unlikely(bytes_copied > (Py_ssize_t) sizeof(val))) { goto raise_overflow; } else { ret = 0; } #elif PY_VERSION_HEX < 0x030d0000 && !(CYTHON_COMPILING_IN_PYPY || CYTHON_COMPILING_IN_LIMITED_API) || defined(_PyLong_AsByteArray) int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; ret = _PyLong_AsByteArray((PyLongObject *)x, bytes, sizeof(val), is_little, !is_unsigned); #else PyObject *v; PyObject *stepval = NULL, *mask = NULL, *shift = NULL; int bits, remaining_bits, is_negative = 0; int chunk_size = (sizeof(long) < 8) ? 30 : 62; if (likely(PyLong_CheckExact(x))) { v = __Pyx_NewRef(x); } else { v = PyNumber_Long(x); if (unlikely(!v)) return (int) -1; assert(PyLong_CheckExact(v)); } { int result = PyObject_RichCompareBool(v, Py_False, Py_LT); if (unlikely(result < 0)) { Py_DECREF(v); return (int) -1; } is_negative = result == 1; } if (is_unsigned && unlikely(is_negative)) { Py_DECREF(v); goto raise_neg_overflow; } else if (is_negative) { stepval = PyNumber_Invert(v); Py_DECREF(v); if (unlikely(!stepval)) return (int) -1; } else { stepval = v; } v = NULL; val = (int) 0; mask = PyLong_FromLong((1L << chunk_size) - 1); if (unlikely(!mask)) goto done; shift = PyLong_FromLong(chunk_size); if (unlikely(!shift)) goto done; for (bits = 0; bits < (int) sizeof(int) * 8 - chunk_size; bits += chunk_size) { PyObject *tmp, *digit; long idigit; digit = PyNumber_And(stepval, mask); if (unlikely(!digit)) goto done; idigit = PyLong_AsLong(digit); Py_DECREF(digit); if (unlikely(idigit < 0)) goto done; val |= ((int) idigit) << bits; tmp = PyNumber_Rshift(stepval, shift); if (unlikely(!tmp)) goto done; Py_DECREF(stepval); stepval = tmp; } Py_DECREF(shift); shift = NULL; Py_DECREF(mask); mask = NULL; { long idigit = PyLong_AsLong(stepval); if (unlikely(idigit < 0)) goto done; remaining_bits = ((int) sizeof(int) * 8) - bits - (is_unsigned ? 0 : 1); if (unlikely(idigit >= (1L << remaining_bits))) goto raise_overflow; val |= ((int) idigit) << bits; } if (!is_unsigned) { if (unlikely(val & (((int) 1) << (sizeof(int) * 8 - 1)))) goto raise_overflow; if (is_negative) val = ~val; } ret = 0; done: Py_XDECREF(shift); Py_XDECREF(mask); Py_XDECREF(stepval); #endif if (unlikely(ret)) return (int) -1; return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to int"); return (int) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to int"); return (int) -1; } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic push #pragma GCC diagnostic ignored "-Wconversion" #endif const int neg_one = (int) -1, const_zero = (int) 0; #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic pop #endif const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(int) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(int) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); #ifdef HAVE_LONG_LONG } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); #endif } } else { if (sizeof(int) <= sizeof(long)) { return PyInt_FromLong((long) value); #ifdef HAVE_LONG_LONG } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); #endif } } { unsigned char *bytes = (unsigned char *)&value; #if !CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX >= 0x030d00A4 if (is_unsigned) { return PyLong_FromUnsignedNativeBytes(bytes, sizeof(value), -1); } else { return PyLong_FromNativeBytes(bytes, sizeof(value), -1); } #elif !CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030d0000 int one = 1; int little = (int)*(unsigned char *)&one; return _PyLong_FromByteArray(bytes, sizeof(int), little, !is_unsigned); #else int one = 1; int little = (int)*(unsigned char *)&one; PyObject *from_bytes, *result = NULL; PyObject *py_bytes = NULL, *arg_tuple = NULL, *kwds = NULL, *order_str = NULL; from_bytes = PyObject_GetAttrString((PyObject*)&PyLong_Type, "from_bytes"); if (!from_bytes) return NULL; py_bytes = PyBytes_FromStringAndSize((char*)bytes, sizeof(int)); if (!py_bytes) goto limited_bad; order_str = PyUnicode_FromString(little ? "little" : "big"); if (!order_str) goto limited_bad; arg_tuple = PyTuple_Pack(2, py_bytes, order_str); if (!arg_tuple) goto limited_bad; if (!is_unsigned) { kwds = PyDict_New(); if (!kwds) goto limited_bad; if (PyDict_SetItemString(kwds, "signed", __Pyx_NewRef(Py_True))) goto limited_bad; } result = PyObject_Call(from_bytes, arg_tuple, kwds); limited_bad: Py_XDECREF(kwds); Py_XDECREF(arg_tuple); Py_XDECREF(order_str); Py_XDECREF(py_bytes); Py_XDECREF(from_bytes); return result; #endif } } /* CIntFromPy */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic push #pragma GCC diagnostic ignored "-Wconversion" #endif const long neg_one = (long) -1, const_zero = (long) 0; #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic pop #endif const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if ((sizeof(long) < sizeof(long))) { __PYX_VERIFY_RETURN_INT(long, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (long) val; } } #endif if (unlikely(!PyLong_Check(x))) { long val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (long) -1; val = __Pyx_PyInt_As_long(tmp); Py_DECREF(tmp); return val; } if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS if (unlikely(__Pyx_PyLong_IsNeg(x))) { goto raise_neg_overflow; } else if (__Pyx_PyLong_IsCompact(x)) { __PYX_VERIFY_RETURN_INT(long, __Pyx_compact_upylong, __Pyx_PyLong_CompactValueUnsigned(x)) } else { const digit* digits = __Pyx_PyLong_Digits(x); assert(__Pyx_PyLong_DigitCount(x) > 1); switch (__Pyx_PyLong_DigitCount(x)) { case 2: if ((8 * sizeof(long) > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(long) >= 2 * PyLong_SHIFT)) { return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 3: if ((8 * sizeof(long) > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(long) >= 3 * PyLong_SHIFT)) { return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 4: if ((8 * sizeof(long) > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(long) >= 4 * PyLong_SHIFT)) { return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; } } #endif #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030C00A7 if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (long) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if ((sizeof(long) <= sizeof(unsigned long))) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x)) #ifdef HAVE_LONG_LONG } else if ((sizeof(long) <= sizeof(unsigned PY_LONG_LONG))) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) #endif } } else { #if CYTHON_USE_PYLONG_INTERNALS if (__Pyx_PyLong_IsCompact(x)) { __PYX_VERIFY_RETURN_INT(long, __Pyx_compact_pylong, __Pyx_PyLong_CompactValue(x)) } else { const digit* digits = __Pyx_PyLong_Digits(x); assert(__Pyx_PyLong_DigitCount(x) > 1); switch (__Pyx_PyLong_SignedDigitCount(x)) { case -2: if ((8 * sizeof(long) - 1 > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(long) - 1 > 2 * PyLong_SHIFT)) { return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 2: if ((8 * sizeof(long) > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(long) - 1 > 2 * PyLong_SHIFT)) { return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -3: if ((8 * sizeof(long) - 1 > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(long) - 1 > 3 * PyLong_SHIFT)) { return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 3: if ((8 * sizeof(long) > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(long) - 1 > 3 * PyLong_SHIFT)) { return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -4: if ((8 * sizeof(long) - 1 > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(long) - 1 > 4 * PyLong_SHIFT)) { return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 4: if ((8 * sizeof(long) > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(long) - 1 > 4 * PyLong_SHIFT)) { return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; } } #endif if ((sizeof(long) <= sizeof(long))) { __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x)) #ifdef HAVE_LONG_LONG } else if ((sizeof(long) <= sizeof(PY_LONG_LONG))) { __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x)) #endif } } { long val; int ret = -1; #if PY_VERSION_HEX >= 0x030d00A6 && !CYTHON_COMPILING_IN_LIMITED_API Py_ssize_t bytes_copied = PyLong_AsNativeBytes( x, &val, sizeof(val), Py_ASNATIVEBYTES_NATIVE_ENDIAN | (is_unsigned ? Py_ASNATIVEBYTES_UNSIGNED_BUFFER | Py_ASNATIVEBYTES_REJECT_NEGATIVE : 0)); if (unlikely(bytes_copied == -1)) { } else if (unlikely(bytes_copied > (Py_ssize_t) sizeof(val))) { goto raise_overflow; } else { ret = 0; } #elif PY_VERSION_HEX < 0x030d0000 && !(CYTHON_COMPILING_IN_PYPY || CYTHON_COMPILING_IN_LIMITED_API) || defined(_PyLong_AsByteArray) int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; ret = _PyLong_AsByteArray((PyLongObject *)x, bytes, sizeof(val), is_little, !is_unsigned); #else PyObject *v; PyObject *stepval = NULL, *mask = NULL, *shift = NULL; int bits, remaining_bits, is_negative = 0; int chunk_size = (sizeof(long) < 8) ? 30 : 62; if (likely(PyLong_CheckExact(x))) { v = __Pyx_NewRef(x); } else { v = PyNumber_Long(x); if (unlikely(!v)) return (long) -1; assert(PyLong_CheckExact(v)); } { int result = PyObject_RichCompareBool(v, Py_False, Py_LT); if (unlikely(result < 0)) { Py_DECREF(v); return (long) -1; } is_negative = result == 1; } if (is_unsigned && unlikely(is_negative)) { Py_DECREF(v); goto raise_neg_overflow; } else if (is_negative) { stepval = PyNumber_Invert(v); Py_DECREF(v); if (unlikely(!stepval)) return (long) -1; } else { stepval = v; } v = NULL; val = (long) 0; mask = PyLong_FromLong((1L << chunk_size) - 1); if (unlikely(!mask)) goto done; shift = PyLong_FromLong(chunk_size); if (unlikely(!shift)) goto done; for (bits = 0; bits < (int) sizeof(long) * 8 - chunk_size; bits += chunk_size) { PyObject *tmp, *digit; long idigit; digit = PyNumber_And(stepval, mask); if (unlikely(!digit)) goto done; idigit = PyLong_AsLong(digit); Py_DECREF(digit); if (unlikely(idigit < 0)) goto done; val |= ((long) idigit) << bits; tmp = PyNumber_Rshift(stepval, shift); if (unlikely(!tmp)) goto done; Py_DECREF(stepval); stepval = tmp; } Py_DECREF(shift); shift = NULL; Py_DECREF(mask); mask = NULL; { long idigit = PyLong_AsLong(stepval); if (unlikely(idigit < 0)) goto done; remaining_bits = ((int) sizeof(long) * 8) - bits - (is_unsigned ? 0 : 1); if (unlikely(idigit >= (1L << remaining_bits))) goto raise_overflow; val |= ((long) idigit) << bits; } if (!is_unsigned) { if (unlikely(val & (((long) 1) << (sizeof(long) * 8 - 1)))) goto raise_overflow; if (is_negative) val = ~val; } ret = 0; done: Py_XDECREF(shift); Py_XDECREF(mask); Py_XDECREF(stepval); #endif if (unlikely(ret)) return (long) -1; return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to long"); return (long) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to long"); return (long) -1; } /* CIntFromPy */ static CYTHON_INLINE int64_t __Pyx_PyInt_As_int64_t(PyObject *x) { #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic push #pragma GCC diagnostic ignored "-Wconversion" #endif const int64_t neg_one = (int64_t) -1, const_zero = (int64_t) 0; #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic pop #endif const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if ((sizeof(int64_t) < sizeof(long))) { __PYX_VERIFY_RETURN_INT(int64_t, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (int64_t) val; } } #endif if (unlikely(!PyLong_Check(x))) { int64_t val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (int64_t) -1; val = __Pyx_PyInt_As_int64_t(tmp); Py_DECREF(tmp); return val; } if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS if (unlikely(__Pyx_PyLong_IsNeg(x))) { goto raise_neg_overflow; } else if (__Pyx_PyLong_IsCompact(x)) { __PYX_VERIFY_RETURN_INT(int64_t, __Pyx_compact_upylong, __Pyx_PyLong_CompactValueUnsigned(x)) } else { const digit* digits = __Pyx_PyLong_Digits(x); assert(__Pyx_PyLong_DigitCount(x) > 1); switch (__Pyx_PyLong_DigitCount(x)) { case 2: if ((8 * sizeof(int64_t) > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int64_t, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int64_t) >= 2 * PyLong_SHIFT)) { return (int64_t) (((((int64_t)digits[1]) << PyLong_SHIFT) | (int64_t)digits[0])); } } break; case 3: if ((8 * sizeof(int64_t) > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int64_t, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int64_t) >= 3 * PyLong_SHIFT)) { return (int64_t) (((((((int64_t)digits[2]) << PyLong_SHIFT) | (int64_t)digits[1]) << PyLong_SHIFT) | (int64_t)digits[0])); } } break; case 4: if ((8 * sizeof(int64_t) > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int64_t, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int64_t) >= 4 * PyLong_SHIFT)) { return (int64_t) (((((((((int64_t)digits[3]) << PyLong_SHIFT) | (int64_t)digits[2]) << PyLong_SHIFT) | (int64_t)digits[1]) << PyLong_SHIFT) | (int64_t)digits[0])); } } break; } } #endif #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030C00A7 if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (int64_t) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if ((sizeof(int64_t) <= sizeof(unsigned long))) { __PYX_VERIFY_RETURN_INT_EXC(int64_t, unsigned long, PyLong_AsUnsignedLong(x)) #ifdef HAVE_LONG_LONG } else if ((sizeof(int64_t) <= sizeof(unsigned PY_LONG_LONG))) { __PYX_VERIFY_RETURN_INT_EXC(int64_t, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) #endif } } else { #if CYTHON_USE_PYLONG_INTERNALS if (__Pyx_PyLong_IsCompact(x)) { __PYX_VERIFY_RETURN_INT(int64_t, __Pyx_compact_pylong, __Pyx_PyLong_CompactValue(x)) } else { const digit* digits = __Pyx_PyLong_Digits(x); assert(__Pyx_PyLong_DigitCount(x) > 1); switch (__Pyx_PyLong_SignedDigitCount(x)) { case -2: if ((8 * sizeof(int64_t) - 1 > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int64_t, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int64_t) - 1 > 2 * PyLong_SHIFT)) { return (int64_t) (((int64_t)-1)*(((((int64_t)digits[1]) << PyLong_SHIFT) | (int64_t)digits[0]))); } } break; case 2: if ((8 * sizeof(int64_t) > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int64_t, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int64_t) - 1 > 2 * PyLong_SHIFT)) { return (int64_t) ((((((int64_t)digits[1]) << PyLong_SHIFT) | (int64_t)digits[0]))); } } break; case -3: if ((8 * sizeof(int64_t) - 1 > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int64_t, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int64_t) - 1 > 3 * PyLong_SHIFT)) { return (int64_t) (((int64_t)-1)*(((((((int64_t)digits[2]) << PyLong_SHIFT) | (int64_t)digits[1]) << PyLong_SHIFT) | (int64_t)digits[0]))); } } break; case 3: if ((8 * sizeof(int64_t) > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int64_t, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int64_t) - 1 > 3 * PyLong_SHIFT)) { return (int64_t) ((((((((int64_t)digits[2]) << PyLong_SHIFT) | (int64_t)digits[1]) << PyLong_SHIFT) | (int64_t)digits[0]))); } } break; case -4: if ((8 * sizeof(int64_t) - 1 > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int64_t, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int64_t) - 1 > 4 * PyLong_SHIFT)) { return (int64_t) (((int64_t)-1)*(((((((((int64_t)digits[3]) << PyLong_SHIFT) | (int64_t)digits[2]) << PyLong_SHIFT) | (int64_t)digits[1]) << PyLong_SHIFT) | (int64_t)digits[0]))); } } break; case 4: if ((8 * sizeof(int64_t) > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int64_t, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int64_t) - 1 > 4 * PyLong_SHIFT)) { return (int64_t) ((((((((((int64_t)digits[3]) << PyLong_SHIFT) | (int64_t)digits[2]) << PyLong_SHIFT) | (int64_t)digits[1]) << PyLong_SHIFT) | (int64_t)digits[0]))); } } break; } } #endif if ((sizeof(int64_t) <= sizeof(long))) { __PYX_VERIFY_RETURN_INT_EXC(int64_t, long, PyLong_AsLong(x)) #ifdef HAVE_LONG_LONG } else if ((sizeof(int64_t) <= sizeof(PY_LONG_LONG))) { __PYX_VERIFY_RETURN_INT_EXC(int64_t, PY_LONG_LONG, PyLong_AsLongLong(x)) #endif } } { int64_t val; int ret = -1; #if PY_VERSION_HEX >= 0x030d00A6 && !CYTHON_COMPILING_IN_LIMITED_API Py_ssize_t bytes_copied = PyLong_AsNativeBytes( x, &val, sizeof(val), Py_ASNATIVEBYTES_NATIVE_ENDIAN | (is_unsigned ? Py_ASNATIVEBYTES_UNSIGNED_BUFFER | Py_ASNATIVEBYTES_REJECT_NEGATIVE : 0)); if (unlikely(bytes_copied == -1)) { } else if (unlikely(bytes_copied > (Py_ssize_t) sizeof(val))) { goto raise_overflow; } else { ret = 0; } #elif PY_VERSION_HEX < 0x030d0000 && !(CYTHON_COMPILING_IN_PYPY || CYTHON_COMPILING_IN_LIMITED_API) || defined(_PyLong_AsByteArray) int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; ret = _PyLong_AsByteArray((PyLongObject *)x, bytes, sizeof(val), is_little, !is_unsigned); #else PyObject *v; PyObject *stepval = NULL, *mask = NULL, *shift = NULL; int bits, remaining_bits, is_negative = 0; int chunk_size = (sizeof(long) < 8) ? 30 : 62; if (likely(PyLong_CheckExact(x))) { v = __Pyx_NewRef(x); } else { v = PyNumber_Long(x); if (unlikely(!v)) return (int64_t) -1; assert(PyLong_CheckExact(v)); } { int result = PyObject_RichCompareBool(v, Py_False, Py_LT); if (unlikely(result < 0)) { Py_DECREF(v); return (int64_t) -1; } is_negative = result == 1; } if (is_unsigned && unlikely(is_negative)) { Py_DECREF(v); goto raise_neg_overflow; } else if (is_negative) { stepval = PyNumber_Invert(v); Py_DECREF(v); if (unlikely(!stepval)) return (int64_t) -1; } else { stepval = v; } v = NULL; val = (int64_t) 0; mask = PyLong_FromLong((1L << chunk_size) - 1); if (unlikely(!mask)) goto done; shift = PyLong_FromLong(chunk_size); if (unlikely(!shift)) goto done; for (bits = 0; bits < (int) sizeof(int64_t) * 8 - chunk_size; bits += chunk_size) { PyObject *tmp, *digit; long idigit; digit = PyNumber_And(stepval, mask); if (unlikely(!digit)) goto done; idigit = PyLong_AsLong(digit); Py_DECREF(digit); if (unlikely(idigit < 0)) goto done; val |= ((int64_t) idigit) << bits; tmp = PyNumber_Rshift(stepval, shift); if (unlikely(!tmp)) goto done; Py_DECREF(stepval); stepval = tmp; } Py_DECREF(shift); shift = NULL; Py_DECREF(mask); mask = NULL; { long idigit = PyLong_AsLong(stepval); if (unlikely(idigit < 0)) goto done; remaining_bits = ((int) sizeof(int64_t) * 8) - bits - (is_unsigned ? 0 : 1); if (unlikely(idigit >= (1L << remaining_bits))) goto raise_overflow; val |= ((int64_t) idigit) << bits; } if (!is_unsigned) { if (unlikely(val & (((int64_t) 1) << (sizeof(int64_t) * 8 - 1)))) goto raise_overflow; if (is_negative) val = ~val; } ret = 0; done: Py_XDECREF(shift); Py_XDECREF(mask); Py_XDECREF(stepval); #endif if (unlikely(ret)) return (int64_t) -1; return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to int64_t"); return (int64_t) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to int64_t"); return (int64_t) -1; } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int32_t(int32_t value) { #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic push #pragma GCC diagnostic ignored "-Wconversion" #endif const int32_t neg_one = (int32_t) -1, const_zero = (int32_t) 0; #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic pop #endif const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(int32_t) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(int32_t) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); #ifdef HAVE_LONG_LONG } else if (sizeof(int32_t) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); #endif } } else { if (sizeof(int32_t) <= sizeof(long)) { return PyInt_FromLong((long) value); #ifdef HAVE_LONG_LONG } else if (sizeof(int32_t) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); #endif } } { unsigned char *bytes = (unsigned char *)&value; #if !CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX >= 0x030d00A4 if (is_unsigned) { return PyLong_FromUnsignedNativeBytes(bytes, sizeof(value), -1); } else { return PyLong_FromNativeBytes(bytes, sizeof(value), -1); } #elif !CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030d0000 int one = 1; int little = (int)*(unsigned char *)&one; return _PyLong_FromByteArray(bytes, sizeof(int32_t), little, !is_unsigned); #else int one = 1; int little = (int)*(unsigned char *)&one; PyObject *from_bytes, *result = NULL; PyObject *py_bytes = NULL, *arg_tuple = NULL, *kwds = NULL, *order_str = NULL; from_bytes = PyObject_GetAttrString((PyObject*)&PyLong_Type, "from_bytes"); if (!from_bytes) return NULL; py_bytes = PyBytes_FromStringAndSize((char*)bytes, sizeof(int32_t)); if (!py_bytes) goto limited_bad; order_str = PyUnicode_FromString(little ? "little" : "big"); if (!order_str) goto limited_bad; arg_tuple = PyTuple_Pack(2, py_bytes, order_str); if (!arg_tuple) goto limited_bad; if (!is_unsigned) { kwds = PyDict_New(); if (!kwds) goto limited_bad; if (PyDict_SetItemString(kwds, "signed", __Pyx_NewRef(Py_True))) goto limited_bad; } result = PyObject_Call(from_bytes, arg_tuple, kwds); limited_bad: Py_XDECREF(kwds); Py_XDECREF(arg_tuple); Py_XDECREF(order_str); Py_XDECREF(py_bytes); Py_XDECREF(from_bytes); return result; #endif } } /* CIntToPy */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic push #pragma GCC diagnostic ignored "-Wconversion" #endif const long neg_one = (long) -1, const_zero = (long) 0; #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic pop #endif const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(long) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(long) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); #ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); #endif } } else { if (sizeof(long) <= sizeof(long)) { return PyInt_FromLong((long) value); #ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); #endif } } { unsigned char *bytes = (unsigned char *)&value; #if !CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX >= 0x030d00A4 if (is_unsigned) { return PyLong_FromUnsignedNativeBytes(bytes, sizeof(value), -1); } else { return PyLong_FromNativeBytes(bytes, sizeof(value), -1); } #elif !CYTHON_COMPILING_IN_LIMITED_API && PY_VERSION_HEX < 0x030d0000 int one = 1; int little = (int)*(unsigned char *)&one; return _PyLong_FromByteArray(bytes, sizeof(long), little, !is_unsigned); #else int one = 1; int little = (int)*(unsigned char *)&one; PyObject *from_bytes, *result = NULL; PyObject *py_bytes = NULL, *arg_tuple = NULL, *kwds = NULL, *order_str = NULL; from_bytes = PyObject_GetAttrString((PyObject*)&PyLong_Type, "from_bytes"); if (!from_bytes) return NULL; py_bytes = PyBytes_FromStringAndSize((char*)bytes, sizeof(long)); if (!py_bytes) goto limited_bad; order_str = PyUnicode_FromString(little ? "little" : "big"); if (!order_str) goto limited_bad; arg_tuple = PyTuple_Pack(2, py_bytes, order_str); if (!arg_tuple) goto limited_bad; if (!is_unsigned) { kwds = PyDict_New(); if (!kwds) goto limited_bad; if (PyDict_SetItemString(kwds, "signed", __Pyx_NewRef(Py_True))) goto limited_bad; } result = PyObject_Call(from_bytes, arg_tuple, kwds); limited_bad: Py_XDECREF(kwds); Py_XDECREF(arg_tuple); Py_XDECREF(order_str); Py_XDECREF(py_bytes); Py_XDECREF(from_bytes); return result; #endif } } /* CIntFromPy */ static CYTHON_INLINE int32_t __Pyx_PyInt_As_int32_t(PyObject *x) { #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic push #pragma GCC diagnostic ignored "-Wconversion" #endif const int32_t neg_one = (int32_t) -1, const_zero = (int32_t) 0; #ifdef __Pyx_HAS_GCC_DIAGNOSTIC #pragma GCC diagnostic pop #endif const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { if ((sizeof(int32_t) < sizeof(long))) { __PYX_VERIFY_RETURN_INT(int32_t, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } return (int32_t) val; } } #endif if (unlikely(!PyLong_Check(x))) { int32_t val; PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (int32_t) -1; val = __Pyx_PyInt_As_int32_t(tmp); Py_DECREF(tmp); return val; } if (is_unsigned) { #if CYTHON_USE_PYLONG_INTERNALS if (unlikely(__Pyx_PyLong_IsNeg(x))) { goto raise_neg_overflow; } else if (__Pyx_PyLong_IsCompact(x)) { __PYX_VERIFY_RETURN_INT(int32_t, __Pyx_compact_upylong, __Pyx_PyLong_CompactValueUnsigned(x)) } else { const digit* digits = __Pyx_PyLong_Digits(x); assert(__Pyx_PyLong_DigitCount(x) > 1); switch (__Pyx_PyLong_DigitCount(x)) { case 2: if ((8 * sizeof(int32_t) > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int32_t, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int32_t) >= 2 * PyLong_SHIFT)) { return (int32_t) (((((int32_t)digits[1]) << PyLong_SHIFT) | (int32_t)digits[0])); } } break; case 3: if ((8 * sizeof(int32_t) > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int32_t, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int32_t) >= 3 * PyLong_SHIFT)) { return (int32_t) (((((((int32_t)digits[2]) << PyLong_SHIFT) | (int32_t)digits[1]) << PyLong_SHIFT) | (int32_t)digits[0])); } } break; case 4: if ((8 * sizeof(int32_t) > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int32_t, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int32_t) >= 4 * PyLong_SHIFT)) { return (int32_t) (((((((((int32_t)digits[3]) << PyLong_SHIFT) | (int32_t)digits[2]) << PyLong_SHIFT) | (int32_t)digits[1]) << PyLong_SHIFT) | (int32_t)digits[0])); } } break; } } #endif #if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030C00A7 if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } #else { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) return (int32_t) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif if ((sizeof(int32_t) <= sizeof(unsigned long))) { __PYX_VERIFY_RETURN_INT_EXC(int32_t, unsigned long, PyLong_AsUnsignedLong(x)) #ifdef HAVE_LONG_LONG } else if ((sizeof(int32_t) <= sizeof(unsigned PY_LONG_LONG))) { __PYX_VERIFY_RETURN_INT_EXC(int32_t, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) #endif } } else { #if CYTHON_USE_PYLONG_INTERNALS if (__Pyx_PyLong_IsCompact(x)) { __PYX_VERIFY_RETURN_INT(int32_t, __Pyx_compact_pylong, __Pyx_PyLong_CompactValue(x)) } else { const digit* digits = __Pyx_PyLong_Digits(x); assert(__Pyx_PyLong_DigitCount(x) > 1); switch (__Pyx_PyLong_SignedDigitCount(x)) { case -2: if ((8 * sizeof(int32_t) - 1 > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int32_t, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int32_t) - 1 > 2 * PyLong_SHIFT)) { return (int32_t) (((int32_t)-1)*(((((int32_t)digits[1]) << PyLong_SHIFT) | (int32_t)digits[0]))); } } break; case 2: if ((8 * sizeof(int32_t) > 1 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 2 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int32_t, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int32_t) - 1 > 2 * PyLong_SHIFT)) { return (int32_t) ((((((int32_t)digits[1]) << PyLong_SHIFT) | (int32_t)digits[0]))); } } break; case -3: if ((8 * sizeof(int32_t) - 1 > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int32_t, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int32_t) - 1 > 3 * PyLong_SHIFT)) { return (int32_t) (((int32_t)-1)*(((((((int32_t)digits[2]) << PyLong_SHIFT) | (int32_t)digits[1]) << PyLong_SHIFT) | (int32_t)digits[0]))); } } break; case 3: if ((8 * sizeof(int32_t) > 2 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 3 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int32_t, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int32_t) - 1 > 3 * PyLong_SHIFT)) { return (int32_t) ((((((((int32_t)digits[2]) << PyLong_SHIFT) | (int32_t)digits[1]) << PyLong_SHIFT) | (int32_t)digits[0]))); } } break; case -4: if ((8 * sizeof(int32_t) - 1 > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int32_t, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int32_t) - 1 > 4 * PyLong_SHIFT)) { return (int32_t) (((int32_t)-1)*(((((((((int32_t)digits[3]) << PyLong_SHIFT) | (int32_t)digits[2]) << PyLong_SHIFT) | (int32_t)digits[1]) << PyLong_SHIFT) | (int32_t)digits[0]))); } } break; case 4: if ((8 * sizeof(int32_t) > 3 * PyLong_SHIFT)) { if ((8 * sizeof(unsigned long) > 4 * PyLong_SHIFT)) { __PYX_VERIFY_RETURN_INT(int32_t, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if ((8 * sizeof(int32_t) - 1 > 4 * PyLong_SHIFT)) { return (int32_t) ((((((((((int32_t)digits[3]) << PyLong_SHIFT) | (int32_t)digits[2]) << PyLong_SHIFT) | (int32_t)digits[1]) << PyLong_SHIFT) | (int32_t)digits[0]))); } } break; } } #endif if ((sizeof(int32_t) <= sizeof(long))) { __PYX_VERIFY_RETURN_INT_EXC(int32_t, long, PyLong_AsLong(x)) #ifdef HAVE_LONG_LONG } else if ((sizeof(int32_t) <= sizeof(PY_LONG_LONG))) { __PYX_VERIFY_RETURN_INT_EXC(int32_t, PY_LONG_LONG, PyLong_AsLongLong(x)) #endif } } { int32_t val; int ret = -1; #if PY_VERSION_HEX >= 0x030d00A6 && !CYTHON_COMPILING_IN_LIMITED_API Py_ssize_t bytes_copied = PyLong_AsNativeBytes( x, &val, sizeof(val), Py_ASNATIVEBYTES_NATIVE_ENDIAN | (is_unsigned ? Py_ASNATIVEBYTES_UNSIGNED_BUFFER | Py_ASNATIVEBYTES_REJECT_NEGATIVE : 0)); if (unlikely(bytes_copied == -1)) { } else if (unlikely(bytes_copied > (Py_ssize_t) sizeof(val))) { goto raise_overflow; } else { ret = 0; } #elif PY_VERSION_HEX < 0x030d0000 && !(CYTHON_COMPILING_IN_PYPY || CYTHON_COMPILING_IN_LIMITED_API) || defined(_PyLong_AsByteArray) int one = 1; int is_little = (int)*(unsigned char *)&one; unsigned char *bytes = (unsigned char *)&val; ret = _PyLong_AsByteArray((PyLongObject *)x, bytes, sizeof(val), is_little, !is_unsigned); #else PyObject *v; PyObject *stepval = NULL, *mask = NULL, *shift = NULL; int bits, remaining_bits, is_negative = 0; int chunk_size = (sizeof(long) < 8) ? 30 : 62; if (likely(PyLong_CheckExact(x))) { v = __Pyx_NewRef(x); } else { v = PyNumber_Long(x); if (unlikely(!v)) return (int32_t) -1; assert(PyLong_CheckExact(v)); } { int result = PyObject_RichCompareBool(v, Py_False, Py_LT); if (unlikely(result < 0)) { Py_DECREF(v); return (int32_t) -1; } is_negative = result == 1; } if (is_unsigned && unlikely(is_negative)) { Py_DECREF(v); goto raise_neg_overflow; } else if (is_negative) { stepval = PyNumber_Invert(v); Py_DECREF(v); if (unlikely(!stepval)) return (int32_t) -1; } else { stepval = v; } v = NULL; val = (int32_t) 0; mask = PyLong_FromLong((1L << chunk_size) - 1); if (unlikely(!mask)) goto done; shift = PyLong_FromLong(chunk_size); if (unlikely(!shift)) goto done; for (bits = 0; bits < (int) sizeof(int32_t) * 8 - chunk_size; bits += chunk_size) { PyObject *tmp, *digit; long idigit; digit = PyNumber_And(stepval, mask); if (unlikely(!digit)) goto done; idigit = PyLong_AsLong(digit); Py_DECREF(digit); if (unlikely(idigit < 0)) goto done; val |= ((int32_t) idigit) << bits; tmp = PyNumber_Rshift(stepval, shift); if (unlikely(!tmp)) goto done; Py_DECREF(stepval); stepval = tmp; } Py_DECREF(shift); shift = NULL; Py_DECREF(mask); mask = NULL; { long idigit = PyLong_AsLong(stepval); if (unlikely(idigit < 0)) goto done; remaining_bits = ((int) sizeof(int32_t) * 8) - bits - (is_unsigned ? 0 : 1); if (unlikely(idigit >= (1L << remaining_bits))) goto raise_overflow; val |= ((int32_t) idigit) << bits; } if (!is_unsigned) { if (unlikely(val & (((int32_t) 1) << (sizeof(int32_t) * 8 - 1)))) goto raise_overflow; if (is_negative) val = ~val; } ret = 0; done: Py_XDECREF(shift); Py_XDECREF(mask); Py_XDECREF(stepval); #endif if (unlikely(ret)) return (int32_t) -1; return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, "value too large to convert to int32_t"); return (int32_t) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, "can't convert negative value to int32_t"); return (int32_t) -1; } /* FormatTypeName */ #if CYTHON_COMPILING_IN_LIMITED_API static __Pyx_TypeName __Pyx_PyType_GetName(PyTypeObject* tp) { PyObject *name = __Pyx_PyObject_GetAttrStr((PyObject *)tp, __pyx_n_s_name); if (unlikely(name == NULL) || unlikely(!PyUnicode_Check(name))) { PyErr_Clear(); Py_XDECREF(name); name = __Pyx_NewRef(__pyx_n_s__78); } return name; } #endif /* FastTypeChecks */ #if CYTHON_COMPILING_IN_CPYTHON static int __Pyx_InBases(PyTypeObject *a, PyTypeObject *b) { while (a) { a = __Pyx_PyType_GetSlot(a, tp_base, PyTypeObject*); if (a == b) return 1; } return b == &PyBaseObject_Type; } static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b) { PyObject *mro; if (a == b) return 1; mro = a->tp_mro; if (likely(mro)) { Py_ssize_t i, n; n = PyTuple_GET_SIZE(mro); for (i = 0; i < n; i++) { if (PyTuple_GET_ITEM(mro, i) == (PyObject *)b) return 1; } return 0; } return __Pyx_InBases(a, b); } static CYTHON_INLINE int __Pyx_IsAnySubtype2(PyTypeObject *cls, PyTypeObject *a, PyTypeObject *b) { PyObject *mro; if (cls == a || cls == b) return 1; mro = cls->tp_mro; if (likely(mro)) { Py_ssize_t i, n; n = PyTuple_GET_SIZE(mro); for (i = 0; i < n; i++) { PyObject *base = PyTuple_GET_ITEM(mro, i); if (base == (PyObject *)a || base == (PyObject *)b) return 1; } return 0; } return __Pyx_InBases(cls, a) || __Pyx_InBases(cls, b); } #if PY_MAJOR_VERSION == 2 static int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject* exc_type2) { PyObject *exception, *value, *tb; int res; __Pyx_PyThreadState_declare __Pyx_PyThreadState_assign __Pyx_ErrFetch(&exception, &value, &tb); res = exc_type1 ? PyObject_IsSubclass(err, exc_type1) : 0; if (unlikely(res == -1)) { PyErr_WriteUnraisable(err); res = 0; } if (!res) { res = PyObject_IsSubclass(err, exc_type2); if (unlikely(res == -1)) { PyErr_WriteUnraisable(err); res = 0; } } __Pyx_ErrRestore(exception, value, tb); return res; } #else static CYTHON_INLINE int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject *exc_type2) { if (exc_type1) { return __Pyx_IsAnySubtype2((PyTypeObject*)err, (PyTypeObject*)exc_type1, (PyTypeObject*)exc_type2); } else { return __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type2); } } #endif static int __Pyx_PyErr_GivenExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { Py_ssize_t i, n; assert(PyExceptionClass_Check(exc_type)); n = PyTuple_GET_SIZE(tuple); #if PY_MAJOR_VERSION >= 3 for (i=0; i<n; i++) { if (exc_type == PyTuple_GET_ITEM(tuple, i)) return 1; } #endif for (i=0; i<n; i++) { PyObject *t = PyTuple_GET_ITEM(tuple, i); #if PY_MAJOR_VERSION < 3 if (likely(exc_type == t)) return 1; #endif if (likely(PyExceptionClass_Check(t))) { if (__Pyx_inner_PyErr_GivenExceptionMatches2(exc_type, NULL, t)) return 1; } else { } } return 0; } static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject* exc_type) { if (likely(err == exc_type)) return 1; if (likely(PyExceptionClass_Check(err))) { if (likely(PyExceptionClass_Check(exc_type))) { return __Pyx_inner_PyErr_GivenExceptionMatches2(err, NULL, exc_type); } else if (likely(PyTuple_Check(exc_type))) { return __Pyx_PyErr_GivenExceptionMatchesTuple(err, exc_type); } else { } } return PyErr_GivenExceptionMatches(err, exc_type); } static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *exc_type1, PyObject *exc_type2) { assert(PyExceptionClass_Check(exc_type1)); assert(PyExceptionClass_Check(exc_type2)); if (likely(err == exc_type1 || err == exc_type2)) return 1; if (likely(PyExceptionClass_Check(err))) { return __Pyx_inner_PyErr_GivenExceptionMatches2(err, exc_type1, exc_type2); } return (PyErr_GivenExceptionMatches(err, exc_type1) || PyErr_GivenExceptionMatches(err, exc_type2)); } #endif /* CheckBinaryVersion */ static unsigned long __Pyx_get_runtime_version(void) { #if __PYX_LIMITED_VERSION_HEX >= 0x030B00A4 return Py_Version & ~0xFFUL; #else const char* rt_version = Py_GetVersion(); unsigned long version = 0; unsigned long factor = 0x01000000UL; unsigned int digit = 0; int i = 0; while (factor) { while ('0' <= rt_version[i] && rt_version[i] <= '9') { digit = digit * 10 + (unsigned int) (rt_version[i] - '0'); ++i; } version += factor * digit; if (rt_version[i] != '.') break; digit = 0; factor >>= 8; ++i; } return version; #endif } static int __Pyx_check_binary_version(unsigned long ct_version, unsigned long rt_version, int allow_newer) { const unsigned long MAJOR_MINOR = 0xFFFF0000UL; if ((rt_version & MAJOR_MINOR) == (ct_version & MAJOR_MINOR)) return 0; if (likely(allow_newer && (rt_version & MAJOR_MINOR) > (ct_version & MAJOR_MINOR))) return 1; { char message[200]; PyOS_snprintf(message, sizeof(message), "compile time Python version %d.%d " "of module '%.100s' " "%s " "runtime version %d.%d", (int) (ct_version >> 24), (int) ((ct_version >> 16) & 0xFF), __Pyx_MODULE_NAME, (allow_newer) ? "was newer than" : "does not match", (int) (rt_version >> 24), (int) ((rt_version >> 16) & 0xFF) ); return PyErr_WarnEx(NULL, message, 1); } } /* FunctionImport */ #ifndef __PYX_HAVE_RT_ImportFunction_3_0_11 #define __PYX_HAVE_RT_ImportFunction_3_0_11 static int __Pyx_ImportFunction_3_0_11(PyObject *module, const char *funcname, void (**f)(void), const char *sig) { PyObject *d = 0; PyObject *cobj = 0; union { void (*fp)(void); void *p; } tmp; d = PyObject_GetAttrString(module, (char *)"__pyx_capi__"); if (!d) goto bad; cobj = PyDict_GetItemString(d, funcname); if (!cobj) { PyErr_Format(PyExc_ImportError, "%.200s does not export expected C function %.200s", PyModule_GetName(module), funcname); goto bad; } if (!PyCapsule_IsValid(cobj, sig)) { PyErr_Format(PyExc_TypeError, "C function %.200s.%.200s has wrong signature (expected %.500s, got %.500s)", PyModule_GetName(module), funcname, sig, PyCapsule_GetName(cobj)); goto bad; } tmp.p = PyCapsule_GetPointer(cobj, sig); *f = tmp.fp; if (!(*f)) goto bad; Py_DECREF(d); return 0; bad: Py_XDECREF(d); return -1; } #endif /* InitStrings */ #if PY_MAJOR_VERSION >= 3 static int __Pyx_InitString(__Pyx_StringTabEntry t, PyObject **str) { if (t.is_unicode | t.is_str) { if (t.intern) { *str = PyUnicode_InternFromString(t.s); } else if (t.encoding) { *str = PyUnicode_Decode(t.s, t.n - 1, t.encoding, NULL); } else { *str = PyUnicode_FromStringAndSize(t.s, t.n - 1); } } else { *str = PyBytes_FromStringAndSize(t.s, t.n - 1); } if (!*str) return -1; if (PyObject_Hash(*str) == -1) return -1; return 0; } #endif static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { while (t->p) { #if PY_MAJOR_VERSION >= 3 __Pyx_InitString(*t, t->p); #else if (t->is_unicode) { *t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL); } else if (t->intern) { *t->p = PyString_InternFromString(t->s); } else { *t->p = PyString_FromStringAndSize(t->s, t->n - 1); } if (!*t->p) return -1; if (PyObject_Hash(*t->p) == -1) return -1; #endif ++t; } return 0; } #include <string.h> static CYTHON_INLINE Py_ssize_t __Pyx_ssize_strlen(const char *s) { size_t len = strlen(s); if (unlikely(len > (size_t) PY_SSIZE_T_MAX)) { PyErr_SetString(PyExc_OverflowError, "byte string is too long"); return -1; } return (Py_ssize_t) len; } static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { Py_ssize_t len = __Pyx_ssize_strlen(c_str); if (unlikely(len < 0)) return NULL; return __Pyx_PyUnicode_FromStringAndSize(c_str, len); } static CYTHON_INLINE PyObject* __Pyx_PyByteArray_FromString(const char* c_str) { Py_ssize_t len = __Pyx_ssize_strlen(c_str); if (unlikely(len < 0)) return NULL; return PyByteArray_FromStringAndSize(c_str, len); } static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject* o) { Py_ssize_t ignore; return __Pyx_PyObject_AsStringAndSize(o, &ignore); } #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT #if !CYTHON_PEP393_ENABLED static const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { char* defenc_c; PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); if (!defenc) return NULL; defenc_c = PyBytes_AS_STRING(defenc); #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII { char* end = defenc_c + PyBytes_GET_SIZE(defenc); char* c; for (c = defenc_c; c < end; c++) { if ((unsigned char) (*c) >= 128) { PyUnicode_AsASCIIString(o); return NULL; } } } #endif *length = PyBytes_GET_SIZE(defenc); return defenc_c; } #else static CYTHON_INLINE const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { if (unlikely(__Pyx_PyUnicode_READY(o) == -1)) return NULL; #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII if (likely(PyUnicode_IS_ASCII(o))) { *length = PyUnicode_GET_LENGTH(o); return PyUnicode_AsUTF8(o); } else { PyUnicode_AsASCIIString(o); return NULL; } #else return PyUnicode_AsUTF8AndSize(o, length); #endif } #endif #endif static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT if ( #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII __Pyx_sys_getdefaultencoding_not_ascii && #endif PyUnicode_Check(o)) { return __Pyx_PyUnicode_AsStringAndSize(o, length); } else #endif #if (!CYTHON_COMPILING_IN_PYPY && !CYTHON_COMPILING_IN_LIMITED_API) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) if (PyByteArray_Check(o)) { *length = PyByteArray_GET_SIZE(o); return PyByteArray_AS_STRING(o); } else #endif { char* result; int r = PyBytes_AsStringAndSize(o, &result, length); if (unlikely(r < 0)) { return NULL; } else { return result; } } } static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) { int is_true = x == Py_True; if (is_true | (x == Py_False) | (x == Py_None)) return is_true; else return PyObject_IsTrue(x); } static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject* x) { int retval; if (unlikely(!x)) return -1; retval = __Pyx_PyObject_IsTrue(x); Py_DECREF(x); return retval; } static PyObject* __Pyx_PyNumber_IntOrLongWrongResultType(PyObject* result, const char* type_name) { __Pyx_TypeName result_type_name = __Pyx_PyType_GetName(Py_TYPE(result)); #if PY_MAJOR_VERSION >= 3 if (PyLong_Check(result)) { if (PyErr_WarnFormat(PyExc_DeprecationWarning, 1, "__int__ returned non-int (type " __Pyx_FMT_TYPENAME "). " "The ability to return an instance of a strict subclass of int is deprecated, " "and may be removed in a future version of Python.", result_type_name)) { __Pyx_DECREF_TypeName(result_type_name); Py_DECREF(result); return NULL; } __Pyx_DECREF_TypeName(result_type_name); return result; } #endif PyErr_Format(PyExc_TypeError, "__%.4s__ returned non-%.4s (type " __Pyx_FMT_TYPENAME ")", type_name, type_name, result_type_name); __Pyx_DECREF_TypeName(result_type_name); Py_DECREF(result); return NULL; } static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) { #if CYTHON_USE_TYPE_SLOTS PyNumberMethods *m; #endif const char *name = NULL; PyObject *res = NULL; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x) || PyLong_Check(x))) #else if (likely(PyLong_Check(x))) #endif return __Pyx_NewRef(x); #if CYTHON_USE_TYPE_SLOTS m = Py_TYPE(x)->tp_as_number; #if PY_MAJOR_VERSION < 3 if (m && m->nb_int) { name = "int"; res = m->nb_int(x); } else if (m && m->nb_long) { name = "long"; res = m->nb_long(x); } #else if (likely(m && m->nb_int)) { name = "int"; res = m->nb_int(x); } #endif #else if (!PyBytes_CheckExact(x) && !PyUnicode_CheckExact(x)) { res = PyNumber_Int(x); } #endif if (likely(res)) { #if PY_MAJOR_VERSION < 3 if (unlikely(!PyInt_Check(res) && !PyLong_Check(res))) { #else if (unlikely(!PyLong_CheckExact(res))) { #endif return __Pyx_PyNumber_IntOrLongWrongResultType(res, name); } } else if (!PyErr_Occurred()) { PyErr_SetString(PyExc_TypeError, "an integer is required"); } return res; } static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_ssize_t ival; PyObject *x; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_CheckExact(b))) { if (sizeof(Py_ssize_t) >= sizeof(long)) return PyInt_AS_LONG(b); else return PyInt_AsSsize_t(b); } #endif if (likely(PyLong_CheckExact(b))) { #if CYTHON_USE_PYLONG_INTERNALS if (likely(__Pyx_PyLong_IsCompact(b))) { return __Pyx_PyLong_CompactValue(b); } else { const digit* digits = __Pyx_PyLong_Digits(b); const Py_ssize_t size = __Pyx_PyLong_SignedDigitCount(b); switch (size) { case 2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; } } #endif return PyLong_AsSsize_t(b); } x = PyNumber_Index(b); if (!x) return -1; ival = PyInt_AsSsize_t(x); Py_DECREF(x); return ival; } static CYTHON_INLINE Py_hash_t __Pyx_PyIndex_AsHash_t(PyObject* o) { if (sizeof(Py_hash_t) == sizeof(Py_ssize_t)) { return (Py_hash_t) __Pyx_PyIndex_AsSsize_t(o); #if PY_MAJOR_VERSION < 3 } else if (likely(PyInt_CheckExact(o))) { return PyInt_AS_LONG(o); #endif } else { Py_ssize_t ival; PyObject *x; x = PyNumber_Index(o); if (!x) return -1; ival = PyInt_AsLong(x); Py_DECREF(x); return ival; } } static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b) { return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); } static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { return PyInt_FromSize_t(ival); } /* #### Code section: utility_code_pragmas_end ### */ #ifdef _MSC_VER #pragma warning( pop ) #endif /* #### Code section: end ### */ #endif /* Py_PYTHON_H */