view CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/mummer-3.23/build_env_setup.sh @ 69:33d812a61356

planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
author jpayne
date Tue, 18 Mar 2025 17:55:14 -0400
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export CONDA_BUILD="1"
export PYTHONNOUSERSITE="1"
export CONDA_DEFAULT_ENV="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce"
export ARCH="64"
export PREFIX="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce"
export BUILD_PREFIX="/opt/conda/conda-bld/mummer_1734020773944/_build_env"
export SYS_PREFIX="/opt/conda"
export SYS_PYTHON="/opt/conda/bin/python"
export SUBDIR="linux-64"
export build_platform="linux-64"
export SRC_DIR="/opt/conda/conda-bld/mummer_1734020773944/work"
export ROOT="/opt/conda"
export CONDA_PY="312"
export PY3K="1"
export PY_VER="3.12"
export STDLIB_DIR="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/lib/python3.12"
export SP_DIR="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/lib/python3.12/site-packages"
export NPY_VER="1.26"
export CONDA_NPY="126"
export NPY_DISTUTILS_APPEND_FLAGS="1"
export PERL_VER="5.32"
export CONDA_PERL="5.32"
export PERL="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/bin/perl"
export LUA_VER="5"
export CONDA_LUA="5"
export R_VER="4.4.*"
export CONDA_R="4.4.*"
export PKG_NAME="mummer"
export PKG_VERSION="3.23"
export PKG_BUILDNUM="21"
export PKG_BUILD_STRING="placeholder"
export PKG_HASH="1234567"
export RECIPE_DIR="/opt/recipe"
export CPU_COUNT="4"
export LANG="C.UTF-8"
export SHLIB_EXT=".so"
export PATH="/opt/conda/conda-bld/mummer_1734020773944/_build_env/bin:/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/bin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin"
export HOME="/home/conda"
export PKG_CONFIG_PATH="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/lib/pkgconfig"
export CMAKE_GENERATOR="Unix Makefiles"
export LD_RUN_PATH="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/lib"
export BUILD="x86_64-conda_cos6-linux-gnu"
export zip_keys="[['c_compiler_version', 'cxx_compiler_version', 'fortran_compiler_version'], ['python', 'numpy', 'python_impl'], ['libarrow', 'libarrow_all']]"
export pin_run_as_build="OrderedDict([('python', {'min_pin': 'x.x', 'max_pin': 'x.x'}), ('r-base', {'min_pin': 'x.x', 'max_pin': 'x.x'}), ('libblst', {'max_pin': 'x.x'}), ('netcdf-cxx4', {'max_pin': 'x.x'}), ('vlfeat', {'max_pin': 'x.x.x'})])"
export extend_keys="{'pin_run_as_build', 'extend_keys', 'ignore_build_only_deps', 'ignore_version'}"
export ignore_build_only_deps="{'numpy', 'python'}"
export openssl="3"
export libeantic="2"
export aws_c_event_stream="0.5.0"
export libtorch="2.4"
export libexactreal="4"
export arpack="3.9"
export libgoogle_cloud_dialogflow_es_devel="2.31"
export python_min="3.9"
export openmpi="4"
export _libgcc_mutex="0.1 conda_forge"
export imath="3.1.12"
export libgoogle_cloud_iam_devel="2.31"
export libgoogle_cloud="2.31"
export fmt="10"
export libgrpc="1.65"
export dbus="1"
export zlib="1"
export gflags="2.2"
export vigra="1.12"
export libgoogle_cloud_automl_devel="2.31"
export suitesparse="7"
export aws_sdk_cpp="1.11.407"
export jpeg="9"
export pdal="2.8.0"
export aws_c_cal="0.8.0"
export libprotobuf="5.27.5"
export libintervalxt="3"
export libraw="0.21"
export cgo_compiler="go-cgo"
export liblapacke="3.9 *netlib"
export gdk_pixbuf="2"
export pulseaudio_client="17.0"
export libvigra="1.12"
export qt="5.15"
export coin_or_cbc="2.10"
export libnetcdf="4.9.2"
export postgresql_plpython="16"
export c_compiler="gcc"
export nettle="3.9"
export mkl="2023"
export aws_c_mqtt="0.11.0"
export nlopt="2.8"
export gdal="3.9"
export geos="3.13.0"
export libxcb="1"
export ptscotch="7.0.5"
export orc="2.0.3"
export exiv2="0.28"
export qtkeychain="0.14"
export libvips="8"
export msgpack_cxx="7"
export libdeflate="1.22"
export starlink_ast="9.2.11"
export netcdf_fortran="4.6"
export ntl="11.4.3"
export libuuid="2"
export gmp="6"
export giflib="5.2"
export libpng="1.6"
export libkml="1.3"
export libduckdb_devel="1"
export coin_or_clp="1.17"
export libpq="16"
export libev="4.33"
export kealib="1.5"
export cdt_name="conda"
export libmicrohttpd="1.0"
export xrootd="5"
export libflint="3.0"
export target_platform="linux-64"
export ldas_tools_framecpp="2.9"
export pyqtchart="5.15"
export gst_plugins_base="1.24"
export libwebp="1"
export aws_checksums="0.2.2"
export channel_targets="bioconda main"
export ncurses="6"
export openslide="4"
export openexr="3.3"
export libidn2="2"
export elfutils="0.191"
export gct="6.2.1705709074"
export lzo="2"
export azure_storage_files_shares_cpp="12.11.0"
export libmatio_cpp="0.2.5"
export s2geometry="0.11.1"
export xz="5"
export lmdb="0.9.29"
export netcdf_cxx4="4.3"
export jasper="4"
export libgoogle_cloud_pubsub_devel="2.31"
export lz4_c="1.9.3"
export qt6_main="6.7"
export google_cloud_cpp="2.31"
export arb="2.23"
export alsa_lib="1.2"
export wcslib="8"
export flann="1.9.2"
export libssh="0.10"
export pyqt="5.15"
export libiconv="1"
export fftw="3"
export mkl_devel="2023"
export tk="8.6"
export s2geography="0.1.2"
export ucx="1.17"
export libsentencepiece="0.2.0"
export hdf5="1.14.3"
export libpdal_core="2.8.0"
export flatbuffers="24.3.25"
export glog="0.7"
export libutf8proc="2.8"
export sox="14.4.2"
export antic="0.2"
export c_stdlib="sysroot"
export aws_crt_cpp="0.29.5"
export pulseaudio="17.0"
export coin_or_utils="2.11"
export libavif="1"
export svt_av1="2.2.1"
export libgdal_core="3.9"
export geotiff="1.7.3"
export c_stdlib_version="2.17"
export davix="0.8"
export libkml_devel="1.3"
export libblst="0.3"
export singular="4.4.0"
export mpfr="4"
export libosqp="0.6.3"
export fortran_compiler="gfortran"
export librdkafka="2.6"
export json_c="0.18"
export lcms2="2"
export metis="5.1.0"
export pcre2="10.44"
export soapysdr="0.8"
export sdl2="2"
export libgoogle_cloud_bigquery_devel="2.31"
export target_gobin="${PREFIX}/bin/"
export channel_sources="conda-forge,bioconda"
export eclib="20231211"
export readline="8"
export srm_ifce="1.24.6"
export azure_storage_files_datalake_cpp="12.12.0"
export libgoogle_cloud_bigtable_devel="2.31"
export libflatsurf="3"
export libblitz="1.0.2"
export mpich="4"
export libopencv="4.10.0"
export azure_storage_blobs_cpp="12.13.0"
export libgoogle_cloud_policytroubleshooter_devel="2.31"
export cairo="1"
export libboost_headers="1.84"
export libtensorflow="2.16"
export libsoup="3"
export ffmpeg="7"
export ucc="1"
export pugixml="1.14"
export libgoogle_cloud_dlp_devel="2.31"
export x264="1!164.*"
export pytorch="2.4"
export petsc="3.21"
export petsc4py="3.21"
export rocksdb="9.1"
export qpdf="11"
export glew="2.1"
export libgoogle_cloud_oauth2_devel="2.31"
export attr="2.5"
export curl="8"
export openh264="2.5.0"
export libitk_devel="5.4"
export libarchive="3.7"
export ace="8.0.1"
export qhull="2020.2"
export libwebp_base="1"
export libgoogle_cloud_discoveryengine_devel="2.31"
export libjpeg_turbo="3"
export libabseil_static="20220623.0"
export aws_c_compression="0.3.0"
export wxwidgets="3.2"
export libgoogle_cloud_spanner_devel="2.31"
export libtiff="4.7"
export sqlite="3"
export vtk_base="9.3.0"
export re2="2024.07.02"
export libptscotch="7.0.5"
export VERBOSE_AT="V=1"
export x265="3.5"
export coin_or_cgl="0.60"
export libode="0.16.5"
export gf2x="1.3"
export libpcap="1.10"
export nspr="4"
export libhugetlbfs="2"
export root_base="6.32.2"
export postgresql="16"
export libgoogle_cloud_storage_devel="2.31"
export pulseaudio_daemon="17.0"
export mumps_mpi="5.7.3"
export libsvm="335"
export bzip2="1"
export libevent="2.1.12"
export urdfdom="4.0"
export mimalloc="2.1.7"
export nss="3"
export go_compiler="go-nocgo"
export superlu_dist="9"
export libcurl="8"
export aws_c_http="0.9.1"
export librsvg="2"
export capnproto="1.0.2"
export qt_main="5.15"
export gfal2="2.23"
export libspatialindex="2.0.0"
export libmed="4.1"
export libframel="8.41"
export pybind11_abi="4"
export libcint="6.1"
export gnuradio_core="3.10.11"
export libgoogle_cloud_dialogflow_cx_devel="2.31"
export VERBOSE_CM="VERBOSE=1"
export libmatio="1.5.28"
export cutensor="2"
export libcblas="3.9 *netlib"
export bullet_cpp="3.25"
export is_freethreading="false"
export libgoogle_cloud_speech_devel="2.31"
export cudnn="9"
export gsl="2.7"
export libopentelemetry_cpp="1.17"
export spdlog="1.12"
export snappy="1.2"
export c_blosc2="2.15"
export cfitsio="4.3.1"
export expat="2"
export cuda_compiler_version="None"
export libboost_devel="1.84"
export libgoogle_cloud_compute_devel="2.31"
export hdf4="4.2.15"
export gsoap="2.8.123"
export ipopt="3.14.16"
export lerc="4"
export glpk="5.0"
export volk="3.1"
export azure_identity_cpp="1.10.0"
export proj="9.5"
export isl="0.26"
export aws_c_s3="0.7.2"
export mumps_seq="5.7.3"
export slepc4py="3.21"
export tiledb="2.26"
export dav1d="1.2.1"
export cxx_compiler="gxx"
export icu="73"
export libzip="1"
export sdl2_mixer="2"
export slepc="3.19"
export cpu_optimization_target="nocona"
export glib="2"
export libopenvino_dev="2024.4.0"
export aws_c_sdkutils="0.2.1"
export libgit2="1.8"
export aom="3.9"
export bamtools="2.5.2"
export vlfeat="0.9.21"
export aws_c_common="0.10.3"
export zfp="1.0"
export pari="2.15.* *_pthread"
export idyntree="13"
export blas_impl="mkl"
export fontconfig="2"
export ruby="2.5"
export libgoogle_cloud_all_devel="2.31"
export libffi="3.4"
export libunwind="1.6"
export console_bridge="1.0"
export s2n="1.5.9"
export azure_storage_queues_cpp="12.4.0"
export aws_c_auth="0.8.0"
export cuda_compiler_version_min="11.8"
export libtensorflow_cc="2.16"
export libaec="1"
export rust_compiler="rust"
export zeromq="4.3.5"
export libhwloc="2.11.2"
export liblapack="3.9 *netlib"
export grpc_cpp="1.52"
export krb5="1.21"
export jsoncpp="1.9.6"
export libgoogle_cloud_devel="2.31"
export libgdal="3.9"
export libyarp="3.9.0"
export gnutls="3.8"
export vtk="9.3.0"
export p11_kit="0.24"
export google_cloud_cpp_common="0.25.0"
export assimp="5.4.2"
export libxsmm="1"
export libblas="3.9 *netlib"
export rdma_core="53"
export gstreamer="1.24"
export openblas="0.3.*"
export tinyxml2="10"
export pcre="8"
export target_goarch="amd64"
export pcl="1.14.1"
export pyqtwebengine="5.15"
export libdap4="3.20.6"
export libsqlite="3"
export libgoogle_cloud_aiplatform_devel="2.31"
export nccl="2"
export sdl2_ttf="2"
export coin_or_osi="0.108"
export uhd="4.7.0"
export libthrift="0.21.0"
export poco="1.13.3"
export openjph="0.17"
export c_ares="1"
export scotch="7.0.5"
export libssh2="1"
export pango="1"
export poppler="24.08"
export target_goos="linux"
export libabseil="20240722"
export libxml2="2"
export libscotch="7.0.5"
export r_base="4.4.*"
export ccr="1.3"
export graphviz="12"
export thrift_cpp="0.21.0"
export harfbuzz="9"
export tensorflow="2.16"
export libsndfile="1.2"
export sdl2_net="2"
export libhwy="1.1"
export libv8="8.9.83"
export zlib_ng="2.2"
export cuda_compiler="None"
export libpdal="2.8.0"
export tbb_devel="2021"
export pixman="0"
export libiio="0"
export googleapis_cpp="0.10"
export abseil_cpp="20220623.0"
export libboost_python_devel="1.84"
export cran_mirror="https://cran.r-project.org"
export mpg123="1.32"
export nodejs="22"
export freetype="2"
export openjpeg="2"
export tbb="2021"
export occt="7.8.1"
export libcrc32c="1.1"
export sdl2_image="2"
export aws_c_io="0.15.2"
export coincbc="2.10"
export dcap="2.47"
export zstd="1.5"
export xerces_c="3.2"
export log4cxx="1.2.0"
export msgpack_c="6"
export azure_core_cpp="1.14.0"
export azure_storage_common_cpp="12.8.0"
export libsecret="0.18"
export libarrow_all="18.0"
export libarrow="18.0"
export cxx_compiler_version="13"
export c_compiler_version="13"
export fortran_compiler_version="13"
export python_impl="cpython"
export CONDA_BUILD_STATE="BUILD"
export PIP_NO_BUILD_ISOLATION="False"
export PIP_NO_DEPENDENCIES="True"
export PIP_IGNORE_INSTALLED="True"
export PIP_CACHE_DIR="/opt/conda/conda-bld/mummer_1734020773944/pip_cache"
export PIP_NO_INDEX="True"
eval "$('/opt/conda/bin/python' -m conda shell.bash hook)"
conda activate "/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce"
conda activate --stack "/opt/conda/conda-bld/mummer_1734020773944/_build_env"