Mercurial > repos > rliterman > csp2
view CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/opt/mummer-3.23/build_env_setup.sh @ 69:33d812a61356
planemo upload commit 2e9511a184a1ca667c7be0c6321a36dc4e3d116d
author | jpayne |
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date | Tue, 18 Mar 2025 17:55:14 -0400 |
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export CONDA_BUILD="1" export PYTHONNOUSERSITE="1" export CONDA_DEFAULT_ENV="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce" export ARCH="64" export PREFIX="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce" export BUILD_PREFIX="/opt/conda/conda-bld/mummer_1734020773944/_build_env" export SYS_PREFIX="/opt/conda" export SYS_PYTHON="/opt/conda/bin/python" export SUBDIR="linux-64" export build_platform="linux-64" export SRC_DIR="/opt/conda/conda-bld/mummer_1734020773944/work" export ROOT="/opt/conda" export CONDA_PY="312" export PY3K="1" export PY_VER="3.12" export STDLIB_DIR="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/lib/python3.12" export SP_DIR="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/lib/python3.12/site-packages" export NPY_VER="1.26" export CONDA_NPY="126" export NPY_DISTUTILS_APPEND_FLAGS="1" export PERL_VER="5.32" export CONDA_PERL="5.32" export PERL="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/bin/perl" export LUA_VER="5" export CONDA_LUA="5" export R_VER="4.4.*" export CONDA_R="4.4.*" export PKG_NAME="mummer" export PKG_VERSION="3.23" export PKG_BUILDNUM="21" export PKG_BUILD_STRING="placeholder" export PKG_HASH="1234567" export RECIPE_DIR="/opt/recipe" export CPU_COUNT="4" export LANG="C.UTF-8" export SHLIB_EXT=".so" export PATH="/opt/conda/conda-bld/mummer_1734020773944/_build_env/bin:/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/bin:/opt/conda/bin:/opt/conda/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/home/conda/bin" export HOME="/home/conda" export PKG_CONFIG_PATH="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/lib/pkgconfig" export CMAKE_GENERATOR="Unix Makefiles" export LD_RUN_PATH="/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce/lib" export BUILD="x86_64-conda_cos6-linux-gnu" export zip_keys="[['c_compiler_version', 'cxx_compiler_version', 'fortran_compiler_version'], ['python', 'numpy', 'python_impl'], ['libarrow', 'libarrow_all']]" export pin_run_as_build="OrderedDict([('python', {'min_pin': 'x.x', 'max_pin': 'x.x'}), ('r-base', {'min_pin': 'x.x', 'max_pin': 'x.x'}), ('libblst', {'max_pin': 'x.x'}), ('netcdf-cxx4', {'max_pin': 'x.x'}), ('vlfeat', {'max_pin': 'x.x.x'})])" export extend_keys="{'pin_run_as_build', 'extend_keys', 'ignore_build_only_deps', 'ignore_version'}" export ignore_build_only_deps="{'numpy', 'python'}" export openssl="3" export libeantic="2" export aws_c_event_stream="0.5.0" export libtorch="2.4" export libexactreal="4" export arpack="3.9" export libgoogle_cloud_dialogflow_es_devel="2.31" export python_min="3.9" export openmpi="4" export _libgcc_mutex="0.1 conda_forge" export imath="3.1.12" export libgoogle_cloud_iam_devel="2.31" export libgoogle_cloud="2.31" export fmt="10" export libgrpc="1.65" export dbus="1" export zlib="1" export gflags="2.2" export vigra="1.12" export libgoogle_cloud_automl_devel="2.31" export suitesparse="7" export aws_sdk_cpp="1.11.407" export jpeg="9" export pdal="2.8.0" export aws_c_cal="0.8.0" export libprotobuf="5.27.5" export libintervalxt="3" export libraw="0.21" export cgo_compiler="go-cgo" export liblapacke="3.9 *netlib" export gdk_pixbuf="2" export pulseaudio_client="17.0" export libvigra="1.12" export qt="5.15" export coin_or_cbc="2.10" export libnetcdf="4.9.2" export postgresql_plpython="16" export c_compiler="gcc" export nettle="3.9" export mkl="2023" export aws_c_mqtt="0.11.0" export nlopt="2.8" export gdal="3.9" export geos="3.13.0" export libxcb="1" export ptscotch="7.0.5" export orc="2.0.3" export exiv2="0.28" export qtkeychain="0.14" export libvips="8" export msgpack_cxx="7" export libdeflate="1.22" export starlink_ast="9.2.11" export netcdf_fortran="4.6" export ntl="11.4.3" export libuuid="2" export gmp="6" export giflib="5.2" export libpng="1.6" export libkml="1.3" export libduckdb_devel="1" export coin_or_clp="1.17" export libpq="16" export libev="4.33" export kealib="1.5" export cdt_name="conda" export libmicrohttpd="1.0" export xrootd="5" export libflint="3.0" export target_platform="linux-64" export ldas_tools_framecpp="2.9" export pyqtchart="5.15" export gst_plugins_base="1.24" export libwebp="1" export aws_checksums="0.2.2" export channel_targets="bioconda main" export ncurses="6" export openslide="4" export openexr="3.3" export libidn2="2" export elfutils="0.191" export gct="6.2.1705709074" export lzo="2" export azure_storage_files_shares_cpp="12.11.0" export libmatio_cpp="0.2.5" export s2geometry="0.11.1" export xz="5" export lmdb="0.9.29" export netcdf_cxx4="4.3" export jasper="4" export libgoogle_cloud_pubsub_devel="2.31" export lz4_c="1.9.3" export qt6_main="6.7" export google_cloud_cpp="2.31" export arb="2.23" export alsa_lib="1.2" export wcslib="8" export flann="1.9.2" export libssh="0.10" export pyqt="5.15" export libiconv="1" export fftw="3" export mkl_devel="2023" export tk="8.6" export s2geography="0.1.2" export ucx="1.17" export libsentencepiece="0.2.0" export hdf5="1.14.3" export libpdal_core="2.8.0" export flatbuffers="24.3.25" export glog="0.7" export libutf8proc="2.8" export sox="14.4.2" export antic="0.2" export c_stdlib="sysroot" export aws_crt_cpp="0.29.5" export pulseaudio="17.0" export coin_or_utils="2.11" export libavif="1" export svt_av1="2.2.1" export libgdal_core="3.9" export geotiff="1.7.3" export c_stdlib_version="2.17" export davix="0.8" export libkml_devel="1.3" export libblst="0.3" export singular="4.4.0" export mpfr="4" export libosqp="0.6.3" export fortran_compiler="gfortran" export librdkafka="2.6" export json_c="0.18" export lcms2="2" export metis="5.1.0" export pcre2="10.44" export soapysdr="0.8" export sdl2="2" export libgoogle_cloud_bigquery_devel="2.31" export target_gobin="${PREFIX}/bin/" export channel_sources="conda-forge,bioconda" export eclib="20231211" export readline="8" export srm_ifce="1.24.6" export azure_storage_files_datalake_cpp="12.12.0" export libgoogle_cloud_bigtable_devel="2.31" export libflatsurf="3" export libblitz="1.0.2" export mpich="4" export libopencv="4.10.0" export azure_storage_blobs_cpp="12.13.0" export libgoogle_cloud_policytroubleshooter_devel="2.31" export cairo="1" export libboost_headers="1.84" export libtensorflow="2.16" export libsoup="3" export ffmpeg="7" export ucc="1" export pugixml="1.14" export libgoogle_cloud_dlp_devel="2.31" export x264="1!164.*" export pytorch="2.4" export petsc="3.21" export petsc4py="3.21" export rocksdb="9.1" export qpdf="11" export glew="2.1" export libgoogle_cloud_oauth2_devel="2.31" export attr="2.5" export curl="8" export openh264="2.5.0" export libitk_devel="5.4" export libarchive="3.7" export ace="8.0.1" export qhull="2020.2" export libwebp_base="1" export libgoogle_cloud_discoveryengine_devel="2.31" export libjpeg_turbo="3" export libabseil_static="20220623.0" export aws_c_compression="0.3.0" export wxwidgets="3.2" export libgoogle_cloud_spanner_devel="2.31" export libtiff="4.7" export sqlite="3" export vtk_base="9.3.0" export re2="2024.07.02" export libptscotch="7.0.5" export VERBOSE_AT="V=1" export x265="3.5" export coin_or_cgl="0.60" export libode="0.16.5" export gf2x="1.3" export libpcap="1.10" export nspr="4" export libhugetlbfs="2" export root_base="6.32.2" export postgresql="16" export libgoogle_cloud_storage_devel="2.31" export pulseaudio_daemon="17.0" export mumps_mpi="5.7.3" export libsvm="335" export bzip2="1" export libevent="2.1.12" export urdfdom="4.0" export mimalloc="2.1.7" export nss="3" export go_compiler="go-nocgo" export superlu_dist="9" export libcurl="8" export aws_c_http="0.9.1" export librsvg="2" export capnproto="1.0.2" export qt_main="5.15" export gfal2="2.23" export libspatialindex="2.0.0" export libmed="4.1" export libframel="8.41" export pybind11_abi="4" export libcint="6.1" export gnuradio_core="3.10.11" export libgoogle_cloud_dialogflow_cx_devel="2.31" export VERBOSE_CM="VERBOSE=1" export libmatio="1.5.28" export cutensor="2" export libcblas="3.9 *netlib" export bullet_cpp="3.25" export is_freethreading="false" export libgoogle_cloud_speech_devel="2.31" export cudnn="9" export gsl="2.7" export libopentelemetry_cpp="1.17" export spdlog="1.12" export snappy="1.2" export c_blosc2="2.15" export cfitsio="4.3.1" export expat="2" export cuda_compiler_version="None" export libboost_devel="1.84" export libgoogle_cloud_compute_devel="2.31" export hdf4="4.2.15" export gsoap="2.8.123" export ipopt="3.14.16" export lerc="4" export glpk="5.0" export volk="3.1" export azure_identity_cpp="1.10.0" export proj="9.5" export isl="0.26" export aws_c_s3="0.7.2" export mumps_seq="5.7.3" export slepc4py="3.21" export tiledb="2.26" export dav1d="1.2.1" export cxx_compiler="gxx" export icu="73" export libzip="1" export sdl2_mixer="2" export slepc="3.19" export cpu_optimization_target="nocona" export glib="2" export libopenvino_dev="2024.4.0" export aws_c_sdkutils="0.2.1" export libgit2="1.8" export aom="3.9" export bamtools="2.5.2" export vlfeat="0.9.21" export aws_c_common="0.10.3" export zfp="1.0" export pari="2.15.* *_pthread" export idyntree="13" export blas_impl="mkl" export fontconfig="2" export ruby="2.5" export libgoogle_cloud_all_devel="2.31" export libffi="3.4" export libunwind="1.6" export console_bridge="1.0" export s2n="1.5.9" export azure_storage_queues_cpp="12.4.0" export aws_c_auth="0.8.0" export cuda_compiler_version_min="11.8" export libtensorflow_cc="2.16" export libaec="1" export rust_compiler="rust" export zeromq="4.3.5" export libhwloc="2.11.2" export liblapack="3.9 *netlib" export grpc_cpp="1.52" export krb5="1.21" export jsoncpp="1.9.6" export libgoogle_cloud_devel="2.31" export libgdal="3.9" export libyarp="3.9.0" export gnutls="3.8" export vtk="9.3.0" export p11_kit="0.24" export google_cloud_cpp_common="0.25.0" export assimp="5.4.2" export libxsmm="1" export libblas="3.9 *netlib" export rdma_core="53" export gstreamer="1.24" export openblas="0.3.*" export tinyxml2="10" export pcre="8" export target_goarch="amd64" export pcl="1.14.1" export pyqtwebengine="5.15" export libdap4="3.20.6" export libsqlite="3" export libgoogle_cloud_aiplatform_devel="2.31" export nccl="2" export sdl2_ttf="2" export coin_or_osi="0.108" export uhd="4.7.0" export libthrift="0.21.0" export poco="1.13.3" export openjph="0.17" export c_ares="1" export scotch="7.0.5" export libssh2="1" export pango="1" export poppler="24.08" export target_goos="linux" export libabseil="20240722" export libxml2="2" export libscotch="7.0.5" export r_base="4.4.*" export ccr="1.3" export graphviz="12" export thrift_cpp="0.21.0" export harfbuzz="9" export tensorflow="2.16" export libsndfile="1.2" export sdl2_net="2" export libhwy="1.1" export libv8="8.9.83" export zlib_ng="2.2" export cuda_compiler="None" export libpdal="2.8.0" export tbb_devel="2021" export pixman="0" export libiio="0" export googleapis_cpp="0.10" export abseil_cpp="20220623.0" export libboost_python_devel="1.84" export cran_mirror="https://cran.r-project.org" export mpg123="1.32" export nodejs="22" export freetype="2" export openjpeg="2" export tbb="2021" export occt="7.8.1" export libcrc32c="1.1" export sdl2_image="2" export aws_c_io="0.15.2" export coincbc="2.10" export dcap="2.47" export zstd="1.5" export xerces_c="3.2" export log4cxx="1.2.0" export msgpack_c="6" export azure_core_cpp="1.14.0" export azure_storage_common_cpp="12.8.0" export libsecret="0.18" export libarrow_all="18.0" export libarrow="18.0" export cxx_compiler_version="13" export c_compiler_version="13" export fortran_compiler_version="13" export python_impl="cpython" export CONDA_BUILD_STATE="BUILD" export PIP_NO_BUILD_ISOLATION="False" export PIP_NO_DEPENDENCIES="True" export PIP_IGNORE_INSTALLED="True" export PIP_CACHE_DIR="/opt/conda/conda-bld/mummer_1734020773944/pip_cache" export PIP_NO_INDEX="True" eval "$('/opt/conda/bin/python' -m conda shell.bash hook)" conda activate "/mnt/c/Users/crash/Documents/BobLiterman/CSP2_Galaxy/CSP2/CSP2_env/env-d9b9114564458d9d-741b3de822f2aaca6c6caa4325c4afce" conda activate --stack "/opt/conda/conda-bld/mummer_1734020773944/_build_env"