[up] |
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drwxr-xr-x |
AddSSU$SketchHeader.class
|
3416 |
-rwxr-xr-x |
AddSSU.class
|
12805 |
-rwxr-xr-x |
AddSSU.java
|
18224 |
-rwxr-xr-x |
AlignmentJob.class
|
1709 |
-rwxr-xr-x |
AlignmentJob.java
|
701 |
-rwxr-xr-x |
AlignmentThreadPool$AlignmentThread.class
|
1316 |
-rwxr-xr-x |
AlignmentThreadPool.class
|
4465 |
-rwxr-xr-x |
AlignmentThreadPool.java
|
2866 |
-rwxr-xr-x |
AnalyzeSketchResults$SSUThread.class
|
1143 |
-rwxr-xr-x |
AnalyzeSketchResults.class
|
16903 |
-rwxr-xr-x |
AnalyzeSketchResults.java
|
17262 |
-rwxr-xr-x |
Blacklist.class
|
6596 |
-rwxr-xr-x |
Blacklist.java
|
6881 |
-rwxr-xr-x |
BlacklistMaker$ProcessThread.class
|
7484 |
-rwxr-xr-x |
BlacklistMaker.class
|
19540 |
-rwxr-xr-x |
BlacklistMaker.java
|
29118 |
-rwxr-xr-x |
BlacklistMaker2$KeyPair.class
|
915 |
-rwxr-xr-x |
BlacklistMaker2$ProcessThread.class
|
4310 |
-rwxr-xr-x |
BlacklistMaker2.class
|
13591 |
-rwxr-xr-x |
BlacklistMaker2.java
|
17149 |
-rwxr-xr-x |
CompareBuffer.class
|
7322 |
-rwxr-xr-x |
CompareBuffer.java
|
7002 |
-rwxr-xr-x |
CompareSSU$ProcessThread.class
|
4182 |
-rwxr-xr-x |
CompareSSU.class
|
11985 |
-rwxr-xr-x |
CompareSSU.java
|
15831 |
-rwxr-xr-x |
CompareSketch$CompareThread.class
|
3524 |
-rwxr-xr-x |
CompareSketch.class
|
16178 |
-rwxr-xr-x |
CompareSketch.java
|
18405 |
-rwxr-xr-x |
Comparison$Depth2Comparator.class
|
1325 |
-rwxr-xr-x |
Comparison$DepthComparator.class
|
1321 |
-rwxr-xr-x |
Comparison$HitsComparator.class
|
1135 |
-rwxr-xr-x |
Comparison$KIDComparator.class
|
1128 |
-rwxr-xr-x |
Comparison$SSUComparator.class
|
1239 |
-rwxr-xr-x |
Comparison$ScoreComparator.class
|
1488 |
-rwxr-xr-x |
Comparison$VolumeComparator.class
|
1261 |
-rwxr-xr-x |
Comparison$WKIDComparator.class
|
1133 |
-rwxr-xr-x |
Comparison.class
|
18675 |
-rwxr-xr-x |
Comparison.java
|
24754 |
-rwxr-xr-x |
DisplayParams.class
|
56672 |
-rwxr-xr-x |
DisplayParams.java
|
76386 |
-rwxr-xr-x |
GlocalAligner.class
|
2497 |
-rwxr-xr-x |
GlocalAligner.java
|
4403 |
-rwxr-xr-x |
InvertKey.class
|
10186 |
-rwxr-xr-x |
InvertKey.java
|
8959 |
-rwxr-xr-x |
KmerLimit$ProcessThread.class
|
6090 |
-rwxr-xr-x |
KmerLimit.class
|
12037 |
-rwxr-xr-x |
KmerLimit.java
|
20279 |
-rwxr-xr-x |
KmerLimit2$ProcessThread.class
|
5760 |
-rwxr-xr-x |
KmerLimit2.class
|
17049 |
-rwxr-xr-x |
KmerLimit2.java
|
31634 |
-rwxr-xr-x |
MergeSketch.class
|
9584 |
-rwxr-xr-x |
MergeSketch.java
|
9915 |
-rwxr-xr-x |
Record.class
|
3223 |
-rwxr-xr-x |
Record.java
|
1965 |
-rwxr-xr-x |
RecordSet.class
|
4332 |
-rwxr-xr-x |
RecordSet.java
|
3132 |
-rwxr-xr-x |
ResultLineParser.class
|
7265 |
-rwxr-xr-x |
ResultLineParser.java
|
6319 |
-rwxr-xr-x |
SSUMap.class
|
5133 |
-rwxr-xr-x |
SSUMap.java
|
3603 |
-rwxr-xr-x |
SendSketch.class
|
20767 |
-rwxr-xr-x |
SendSketch.java
|
27102 |
-rwxr-xr-x |
Sketch.class
|
28812 |
-rwxr-xr-x |
Sketch.java
|
34210 |
-rwxr-xr-x |
SketchHeap.class
|
11588 |
-rwxr-xr-x |
SketchHeap.java
|
10602 |
-rwxr-xr-x |
SketchIdComparator.java
|
333 |
-rwxr-xr-x |
SketchIndex$IndexThread.class
|
2351 |
-rwxr-xr-x |
SketchIndex.class
|
9506 |
-rwxr-xr-x |
SketchIndex.java
|
10985 |
-rwxr-xr-x |
SketchMaker$ProcessThread.class
|
14695 |
-rwxr-xr-x |
SketchMaker$WriteThread.class
|
2424 |
-rwxr-xr-x |
SketchMaker.class
|
23181 |
-rwxr-xr-x |
SketchMaker.java
|
47128 |
-rwxr-xr-x |
SketchMakerMini.class
|
15703 |
-rwxr-xr-x |
SketchMakerMini.java
|
17908 |
-rwxr-xr-x |
SketchObject.class
|
29523 |
-rwxr-xr-x |
SketchObject.java
|
45372 |
-rwxr-xr-x |
SketchResults.class
|
7174 |
-rwxr-xr-x |
SketchResults.java
|
6026 |
-rwxr-xr-x |
SketchSearcher$CompareThread.class
|
3806 |
-rwxr-xr-x |
SketchSearcher.class
|
18920 |
-rwxr-xr-x |
SketchSearcher.java
|
19777 |
-rwxr-xr-x |
SketchTool$LoadThread.class
|
3352 |
-rwxr-xr-x |
SketchTool$LoadThread2.class
|
2053 |
-rwxr-xr-x |
SketchTool$SketchThread.class
|
1650 |
-rwxr-xr-x |
SketchTool.class
|
37456 |
-rwxr-xr-x |
SketchTool.java
|
51328 |
-rwxr-xr-x |
SubSketch.class
|
10530 |
-rwxr-xr-x |
SubSketch.java
|
11160 |
-rwxr-xr-x |
SummarizeSketchStats$SketchResultsLine.class
|
1839 |
-rwxr-xr-x |
SummarizeSketchStats$SketchResultsSummary.class
|
5418 |
-rwxr-xr-x |
SummarizeSketchStats.class
|
7670 |
-rwxr-xr-x |
SummarizeSketchStats.java
|
11253 |
-rwxr-xr-x |
Whitelist.class
|
1661 |
-rwxr-xr-x |
Whitelist.java
|
1096 |
-rwxr-xr-x |