jpayne@69: // Copyright © 2015, Battelle National Biodefense Institute (BNBI);
jpayne@69: // all rights reserved. Authored by: Brian Ondov, Todd Treangen,
jpayne@69: // Sergey Koren, and Adam Phillippy
jpayne@69: //
jpayne@69: // See the LICENSE.txt file included with this software for license information.
jpayne@69: 
jpayne@69: #ifndef HashList_h
jpayne@69: #define HashList_h
jpayne@69: 
jpayne@69: #include "hash.h"
jpayne@69: #include <vector>
jpayne@69: 
jpayne@69: class HashList
jpayne@69: {
jpayne@69: public:
jpayne@69:     
jpayne@69:     HashList() {use64 = true;}
jpayne@69:     HashList(bool use64new) {use64 = use64new;}
jpayne@69:     
jpayne@69:     hash_u at(int index) const;
jpayne@69:     void clear();
jpayne@69:     void resize(int size);
jpayne@69:     void set32(int index, uint32_t value);
jpayne@69:     void set64(int index, uint64_t value);
jpayne@69:     void setUse64(bool use64New) {use64 = use64New;}
jpayne@69:     int size() const {return use64 ? hashes64.size() : hashes32.size();}
jpayne@69:     void sort();
jpayne@69:     void push_back32(hash32_t hash) {hashes32.push_back(hash);}
jpayne@69:     void push_back64(hash64_t hash) {hashes64.push_back(hash);}
jpayne@69:     bool get64() const {return use64;}
jpayne@69:     
jpayne@69: private:
jpayne@69:     
jpayne@69:     bool use64;
jpayne@69:     std::vector<hash32_t> hashes32;
jpayne@69:     std::vector<hash64_t> hashes64;
jpayne@69: };
jpayne@69: 
jpayne@69: #endif