jpayne@69: #ifndef  __TIGRINC_HH
jpayne@69: #define  __TIGRINC_HH
jpayne@69: 
jpayne@69: 
jpayne@69: #include  <cstdio>
jpayne@69: #include  <cstdlib>
jpayne@69: #include  <cmath>
jpayne@69: #include  <cstring>
jpayne@69: #include  <cctype>
jpayne@69: #include  <climits>
jpayne@69: #include  <cfloat>
jpayne@69: #include  <ctime>
jpayne@69: #include  <cassert>
jpayne@69: #include  <cerrno>
jpayne@69: #include  <unistd.h>
jpayne@69: 
jpayne@69: 
jpayne@69: #define  TRUE  1
jpayne@69: #define  FALSE  0
jpayne@69: #ifndef  EXIT_FAILURE
jpayne@69:   #define  EXIT_FAILURE  -1
jpayne@69: #endif
jpayne@69: #ifndef  EXIT_SUCCESS
jpayne@69:   #define  EXIT_SUCCESS  0
jpayne@69: #endif
jpayne@69: 
jpayne@69: #define  INCR_SIZE 10000
jpayne@69: #define  SMALL_INIT_SIZE 100
jpayne@69: #define  INIT_SIZE 10000
jpayne@69: #define  MAX_LINE 1024
jpayne@69: 
jpayne@69: 
jpayne@69: FILE *  File_Open  (const char *, const char *);
jpayne@69: void *  Safe_calloc  (size_t, size_t);
jpayne@69: void *  Safe_malloc  (size_t);
jpayne@69: void *  Safe_realloc  (void *, size_t);
jpayne@69: char  Complement  (char);
jpayne@69: bool CompareIUPAC (char, char);
jpayne@69: int  Read_String  (FILE *, char * &, long int &, char [], int);
jpayne@69: void  Reverse_Complement (char S [], long int Lo, long int Hi);
jpayne@69: 
jpayne@69: #endif