jpayne@68: import pysam.utils jpayne@68: jpayne@68: annotate = pysam.utils.PysamDispatcher('bcftools', 'annotate') jpayne@68: call = pysam.utils.PysamDispatcher('bcftools', 'call') jpayne@68: cnv = pysam.utils.PysamDispatcher('bcftools', 'cnv') jpayne@68: concat = pysam.utils.PysamDispatcher('bcftools', 'concat') jpayne@68: consensus = pysam.utils.PysamDispatcher('bcftools', 'consensus') jpayne@68: convert = pysam.utils.PysamDispatcher('bcftools', 'convert') jpayne@68: csq = pysam.utils.PysamDispatcher('bcftools', 'csq') jpayne@68: filter = pysam.utils.PysamDispatcher('bcftools', 'filter') jpayne@68: gtcheck = pysam.utils.PysamDispatcher('bcftools', 'gtcheck') jpayne@68: head = pysam.utils.PysamDispatcher('bcftools', 'head') jpayne@68: index = pysam.utils.PysamDispatcher('bcftools', 'index') jpayne@68: isec = pysam.utils.PysamDispatcher('bcftools', 'isec') jpayne@68: merge = pysam.utils.PysamDispatcher('bcftools', 'merge') jpayne@68: mpileup = pysam.utils.PysamDispatcher('bcftools', 'mpileup') jpayne@68: norm = pysam.utils.PysamDispatcher('bcftools', 'norm') jpayne@68: plugin = pysam.utils.PysamDispatcher('bcftools', 'plugin') jpayne@68: query = pysam.utils.PysamDispatcher('bcftools', 'query') jpayne@68: reheader = pysam.utils.PysamDispatcher('bcftools', 'reheader') jpayne@68: roh = pysam.utils.PysamDispatcher('bcftools', 'roh') jpayne@68: sort = pysam.utils.PysamDispatcher('bcftools', 'sort') jpayne@68: stats = pysam.utils.PysamDispatcher('bcftools', 'stats') jpayne@68: view = pysam.utils.PysamDispatcher('bcftools', 'view') jpayne@68: jpayne@68: __all__ = [ jpayne@68: 'annotate', 'call', 'cnv', 'concat', 'consensus', jpayne@68: 'convert', 'csq', 'filter', 'gtcheck', 'head', jpayne@68: 'index', 'isec', 'merge', 'mpileup', 'norm', jpayne@68: 'plugin', 'query', 'reheader', 'roh', 'sort', jpayne@68: 'stats', 'view', jpayne@68: ]