jpayne@68: package icecream;
jpayne@68: 
jpayne@68: import shared.Parse;
jpayne@68: 
jpayne@68: public class PBHeader {
jpayne@68: 
jpayne@68: 	public PBHeader(String s){
jpayne@68: 		setFrom(s);
jpayne@68: 	}
jpayne@68: 	
jpayne@68: 	//m64021_190821_100154/102/32038_35649
jpayne@68: 	//m64021_190821_100154 is run id
jpayne@68: 	//102 is zmw id
jpayne@68: 	//32038_35649 are movie coordinates
jpayne@68: 	//This function allows extra stuff like whitespace after the end of the formal header.
jpayne@68: 	public void setFrom(final String header){
jpayne@68: 		original=header;
jpayne@68: 		int slash1=header.indexOf('/');
jpayne@68: 		assert(slash1>=0) : "Misformatted PBHeader: "+header;
jpayne@68: 		int slash2=header.indexOf('/', slash1+1);
jpayne@68: 		assert(slash2>=0) : "Misformatted PBHeader: "+header;
jpayne@68: 		int under3=header.indexOf('_', slash2+1);
jpayne@68: 		assert(under3>=0) : "Misformatted PBHeader: "+header;
jpayne@68: 		int terminator=under3+1;
jpayne@68: 		while(terminator<header.length() && Character.isDigit(header.charAt(terminator))){terminator++;}
jpayne@68: 		runID=header.substring(0, slash1);
jpayne@68: //		System.err.println("\n"+header+"\n"+slash1+","+slash2);
jpayne@68: 		zmwID=Parse.parseInt(header, slash1+1, slash2);
jpayne@68: 		start=Parse.parseInt(header, slash2+1, under3);
jpayne@68: 		stop=Parse.parseInt(header, under3+1, terminator);
jpayne@68: 	}
jpayne@68: 	
jpayne@68: 	public static int parseZMW(final String header){
jpayne@68: 		int slash1=header.indexOf('/');
jpayne@68: 		assert(slash1>=0) : "Misformatted PBHeader: "+header;
jpayne@68: 		int slash2=header.indexOf('/', slash1+1);
jpayne@68: 		assert(slash2>=0) : "Misformatted PBHeader: "+header;
jpayne@68: 		int zmwID=Parse.parseInt(header, slash1+1, slash2);
jpayne@68: 		return zmwID;
jpayne@68: 	}
jpayne@68: 	
jpayne@68: 	public String original;
jpayne@68: 	public String runID;
jpayne@68: 	public int zmwID;
jpayne@68: 	public int start;
jpayne@68: 	public int stop;
jpayne@68: 	
jpayne@68: }